Click here to switch to the map view.

The map label for this gene is 77454840

Identifier: 77454840

GI number: 77454840

Start: 251510

End: 252178

Strand: Direct

Name: 77454840

Synonym: pREL1_0273

Alternate gene names: NA

Gene position: 251510-252178 (Clockwise)

Preceding gene: 77454838

Following gene: 77454842

Centisome position: 92.61

GC content: 68.61

Gene sequence:

>669_bases
GTGAGACGATGGGCTGACTCGACCGTCCGACGGCGGTCGTCGCGTGACGAGCTGGCTCGTAACGAGAAGCGCGAGCGCGT
GGTCCAGGCTGCGAAGCAGGTCATCGACGAGTCCGGGATCGACGTCGGCACCGCTCTCATCGCGGAGCGGGCTGGCATTC
CCAGGCCGCACGTCTACCGCAACTTCACCAGCCGAGACGACCTGGACGACCAGGTGGCCAGGAGAGCAGCGCAGGACCTG
ATCGCGCGGGTGCGCCCGCACCTGACCCGACGAGGCACACCTCAGCAGGTCGTCGAGGGGTTGGTGCGCGCCTGCGCCAC
CTGGGCCGAGGAGCATCCGCATCTCTACCGCTTCCTGGCAGCCCGTGGGCAGAGTCGGACCCTGCATCGTGCCCGGATGG
GGCGGTCGCGCCTCCTCGACGAGATCGCTGCGGCTGCCCGCGGGTACACCAAATCGGGTGTGGCGAGCTTTCCGGAAGGC
ATCCTGGTCGGGGTGATGGGGATGGTGGATGCCACCGTCATCTGGTGGCTCGACCAGCGAGACGAGTCCCTGGACGTCAT
GGTCGGACGGCTCGCTGGTCACGTCACCCTCGTGCTCCGGGATGCGCTGGCCGGCCACGGGATCCCGCTCGACCCTGCGG
TCGAGCTGGAGCCGTTCGTAGCGGAATGA

Upstream 100 bases:

>100_bases
TGGGTACAAGGTGTCCCACGTCGGCGTCGGGCGGTGCTCGGCGTGTGCGGCACCGAGCTGAGTCGTCGCGCCGCGCCTGT
AGGCTGCGCGGGTGGTGGAA

Downstream 100 bases:

>100_bases
GGATGTCAGGGCCCGGTCGTGGCCGTGCCCTGCTCGAAGTGCTTGAGATCGACGACGATGAACGTTGCGTGCGCGGTGGC
GACCTTGTCGCCGACTTGGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRRWADSTVRRRSSRDELARNEKRERVVQAAKQVIDESGIDVGTALIAERAGIPRPHVYRNFTSRDDLDDQVARRAAQDL
IARVRPHLTRRGTPQQVVEGLVRACATWAEEHPHLYRFLAARGQSRTLHRARMGRSRLLDEIAAAARGYTKSGVASFPEG
ILVGVMGMVDATVIWWLDQRDESLDVMVGRLAGHVTLVLRDALAGHGIPLDPAVELEPFVAE

Sequences:

>Translated_222_residues
MRRWADSTVRRRSSRDELARNEKRERVVQAAKQVIDESGIDVGTALIAERAGIPRPHVYRNFTSRDDLDDQVARRAAQDL
IARVRPHLTRRGTPQQVVEGLVRACATWAEEHPHLYRFLAARGQSRTLHRARMGRSRLLDEIAAAARGYTKSGVASFPEG
ILVGVMGMVDATVIWWLDQRDESLDVMVGRLAGHVTLVLRDALAGHGIPLDPAVELEPFVAE
>Mature_222_residues
MRRWADSTVRRRSSRDELARNEKRERVVQAAKQVIDESGIDVGTALIAERAGIPRPHVYRNFTSRDDLDDQVARRAAQDL
IARVRPHLTRRGTPQQVVEGLVRACATWAEEHPHLYRFLAARGQSRTLHRARMGRSRLLDEIAAAARGYTKSGVASFPEG
ILVGVMGMVDATVIWWLDQRDESLDVMVGRLAGHVTLVLRDALAGHGIPLDPAVELEPFVAE

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24811; Mature: 24811

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWADSTVRRRSSRDELARNEKRERVVQAAKQVIDESGIDVGTALIAERAGIPRPHVYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH
NFTSRDDLDDQVARRAAQDLIARVRPHLTRRGTPQQVVEGLVRACATWAEEHPHLYRFLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
ARGQSRTLHRARMGRSRLLDEIAAAARGYTKSGVASFPEGILVGVMGMVDATVIWWLDQR
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHEECCC
DESLDVMVGRLAGHVTLVLRDALAGHGIPLDPAVELEPFVAE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRWADSTVRRRSSRDELARNEKRERVVQAAKQVIDESGIDVGTALIAERAGIPRPHVYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH
NFTSRDDLDDQVARRAAQDLIARVRPHLTRRGTPQQVVEGLVRACATWAEEHPHLYRFLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
ARGQSRTLHRARMGRSRLLDEIAAAARGYTKSGVASFPEGILVGVMGMVDATVIWWLDQR
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHEECCC
DESLDVMVGRLAGHVTLVLRDALAGHGIPLDPAVELEPFVAE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA