Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
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Accession | NC_007491 |
Length | 271,577 |
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The map label for this gene is 77454806
Identifier: 77454806
GI number: 77454806
Start: 218456
End: 218788
Strand: Direct
Name: 77454806
Synonym: pREL1_0239
Alternate gene names: NA
Gene position: 218456-218788 (Clockwise)
Preceding gene: 77454803
Following gene: 77454810
Centisome position: 80.44
GC content: 60.06
Gene sequence:
>333_bases GTGGGCAGGACCAGGTTCTTAACCACCGATGACCCCGAGGAGGGATGGTCGTGGGTTCGCGACGAAATTGACTCTGGTCG ACCGAGTCTGGTCTGGGGCGACATCGCCGAGCTGCCGTATCTGAAGGTCCAGATGAAGATGAGTCGCCACGATATCGTCG TGATTGGCTACGACGAGGAGGCGGGCGTGGCGTTCGTCGTAGACAACGACTGGGCGGAGGTGCAGGAGAGGTTCCTTTTG ACTCGCGGGCTCGGGCCAGGTCTTCGATGTCGTTCCCGCAGACCGTGGTCGACGAACGACAACAGGGGGTGGAATCCGAA TCCTTGTTTGTAG
Upstream 100 bases:
>100_bases AGGCGCCGGCACGTTTCCGGATCTTGCGGACCTTCACCCGCAGCCCTTCCTCACGCCAAAGCCGTTGAACCTTCTTCTTG TTGATGACCCAGCCGGCTCG
Downstream 100 bases:
>100_bases GTCGGTGCCGCGTTCGCTTTTCCGAATGTGCGGTGGCGAGGGTGGCCGTCGAGGTCAATCACGATCGGGTTCTGGGCGGT GATGTCGGTGATCGGGCGCG
Product: putative transposase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MGRTRFLTTDDPEEGWSWVRDEIDSGRPSLVWGDIAELPYLKVQMKMSRHDIVVIGYDEEAGVAFVVDNDWAEVQERFLL TRGLGPGLRCRSRRPWSTNDNRGWNPNPCL
Sequences:
>Translated_110_residues MGRTRFLTTDDPEEGWSWVRDEIDSGRPSLVWGDIAELPYLKVQMKMSRHDIVVIGYDEEAGVAFVVDNDWAEVQERFLL TRGLGPGLRCRSRRPWSTNDNRGWNPNPCL >Mature_109_residues GRTRFLTTDDPEEGWSWVRDEIDSGRPSLVWGDIAELPYLKVQMKMSRHDIVVIGYDEEAGVAFVVDNDWAEVQERFLLT RGLGPGLRCRSRRPWSTNDNRGWNPNPCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12707; Mature: 12576
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTRFLTTDDPEEGWSWVRDEIDSGRPSLVWGDIAELPYLKVQMKMSRHDIVVIGYDEE CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEECCC AGVAFVVDNDWAEVQERFLLTRGLGPGLRCRSRRPWSTNDNRGWNPNPCL CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRTRFLTTDDPEEGWSWVRDEIDSGRPSLVWGDIAELPYLKVQMKMSRHDIVVIGYDEE CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEECCC AGVAFVVDNDWAEVQERFLLTRGLGPGLRCRSRRPWSTNDNRGWNPNPCL CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA