| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454735
Identifier: 77454735
GI number: 77454735
Start: 163267
End: 164505
Strand: Direct
Name: 77454735
Synonym: pREL1_0168
Alternate gene names: NA
Gene position: 163267-164505 (Clockwise)
Preceding gene: 77454734
Following gene: 77454736
Centisome position: 60.12
GC content: 69.73
Gene sequence:
>1239_bases ATGAGCGGGGTTCGGGCGCTCGCGCCGGATGAGTTGCGGGCGTTTCGCCTGGCACGGCTGGTTTCTGCCGAACAGATGCC GTATTTCATGCGGGCGTTGTTCGCAGCGCAGCCTGTTGCTGCACCGGGGTTGGGCACGTTCGCGGTGGATGCGCAGTGGC GGCTTTATCTAGATCCGGCGTTGTTGGTGGGGGCGGGTGCGTGGCCGGTGCCGGTGGCGGGTGCGGTGTTGCTGCACGAG GTCGGGCACTTGCTGCGGGCGCACGGTGTGCGGGGGCAGTCCTTGCCGAAGCCGGTCCAGCATGTGGCGTGGAATTACGC GGCGGACGCGGAAATCAACGACGACTTGCTGGCGGCGGGCATCGGGTTACCGGACGGGGTGATCACTCCACAATCGTTCG GGTGCGAGGACGGCGGAATCGCAGAGGACTACTACACGCACCTGATCGATCCGGCTACGGGACAGCAGTTTCCAGACGAC GACGATGTGGGATGCGGGTCCGGTGCGGGGTGCGCGCCGGTGCCGGGGGAGTTGGGCGCGGCAGCGGGGGAGGTCGCGGA CGGGTTGGACGACGCGGAAGCGGATCTGGTGCGCCGTCATGTGGCGCGGGCGGTGCAGGCGGCCCAAGGGAAGGGGCGCG GGAGCGCACCGGCAGGATTGGCGCGGTGGGCTGGTGAGGTTCTCACGCCGCCGACCGTGCCGTGGGATCGGGTGTTGCGT GCGGTGATCCGGCGAGCATTGGCGGATCAGTCGGGGCGGACGAACTACAGCTATGCGCGTCCGTCGCGGCGCAGCGTGCC GGGGATCGTGGCCCCGGCGATGCGGGGTCCGTCGATCACGGTGTCGATTGTGATCGACACGTCGGGGTCCATGTCGGCGG CGGATCTGTCGGCGGCGATGGGTGAGGTGGCGGGTGTGCTGCGGGCGGGCGGTGTGGCGCGGGAGCGGGTTCGGATTCTC TCGTGCGATGCGGCATCGACGTCTGCGCAGGCGGTGCGGTCGGTGGCCGATGTGGTGTTGGTGGGCGGCGGCGGTACGGA TATGCGGGTCGGGATCGATGCGGCGAACGCGGCCCGTCCTGCCCCGCACGTGGTGATCGTGTTGACGGACGGGGATACGC CGTGGCCGGATCGTCCGTCGCGGGCGCATCTGGTGTGCGCGGTGATCGGCAACGACGGCGCACTGGCGCGGACCCCGGCA TGGGCGTCGAGTGTGCAGATCCCGGTCGGTGCGTCGTGA
Upstream 100 bases:
>100_bases GCACGCTGGCGAAGGCGCGACCGGCGAAGGCGACTGTCCCGGCGTCTGCACGTCGGTTCGCGCCGATGTTGACCGCTGCG GGTCTGATGGAGGCGGCAGC
Downstream 100 bases:
>100_bases ACTCGGTGAGCGGTGATCTGTTGCGGTACGCGCAGCAGGTGTTGACCGGGACTTCTCACGCGCCGGATCAGGTGGCGAGC GTGGTCGCCGGTACCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSGVRALAPDELRAFRLARLVSAEQMPYFMRALFAAQPVAAPGLGTFAVDAQWRLYLDPALLVGAGAWPVPVAGAVLLHE VGHLLRAHGVRGQSLPKPVQHVAWNYAADAEINDDLLAAGIGLPDGVITPQSFGCEDGGIAEDYYTHLIDPATGQQFPDD DDVGCGSGAGCAPVPGELGAAAGEVADGLDDAEADLVRRHVARAVQAAQGKGRGSAPAGLARWAGEVLTPPTVPWDRVLR AVIRRALADQSGRTNYSYARPSRRSVPGIVAPAMRGPSITVSIVIDTSGSMSAADLSAAMGEVAGVLRAGGVARERVRIL SCDAASTSAQAVRSVADVVLVGGGGTDMRVGIDAANAARPAPHVVIVLTDGDTPWPDRPSRAHLVCAVIGNDGALARTPA WASSVQIPVGAS
Sequences:
>Translated_412_residues MSGVRALAPDELRAFRLARLVSAEQMPYFMRALFAAQPVAAPGLGTFAVDAQWRLYLDPALLVGAGAWPVPVAGAVLLHE VGHLLRAHGVRGQSLPKPVQHVAWNYAADAEINDDLLAAGIGLPDGVITPQSFGCEDGGIAEDYYTHLIDPATGQQFPDD DDVGCGSGAGCAPVPGELGAAAGEVADGLDDAEADLVRRHVARAVQAAQGKGRGSAPAGLARWAGEVLTPPTVPWDRVLR AVIRRALADQSGRTNYSYARPSRRSVPGIVAPAMRGPSITVSIVIDTSGSMSAADLSAAMGEVAGVLRAGGVARERVRIL SCDAASTSAQAVRSVADVVLVGGGGTDMRVGIDAANAARPAPHVVIVLTDGDTPWPDRPSRAHLVCAVIGNDGALARTPA WASSVQIPVGAS >Mature_411_residues SGVRALAPDELRAFRLARLVSAEQMPYFMRALFAAQPVAAPGLGTFAVDAQWRLYLDPALLVGAGAWPVPVAGAVLLHEV GHLLRAHGVRGQSLPKPVQHVAWNYAADAEINDDLLAAGIGLPDGVITPQSFGCEDGGIAEDYYTHLIDPATGQQFPDDD DVGCGSGAGCAPVPGELGAAAGEVADGLDDAEADLVRRHVARAVQAAQGKGRGSAPAGLARWAGEVLTPPTVPWDRVLRA VIRRALADQSGRTNYSYARPSRRSVPGIVAPAMRGPSITVSIVIDTSGSMSAADLSAAMGEVAGVLRAGGVARERVRILS CDAASTSAQAVRSVADVVLVGGGGTDMRVGIDAANAARPAPHVVIVLTDGDTPWPDRPSRAHLVCAVIGNDGALARTPAW ASSVQIPVGAS
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42325; Mature: 42194
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVRALAPDELRAFRLARLVSAEQMPYFMRALFAAQPVAAPGLGTFAVDAQWRLYLDPA CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCH LLVGAGAWPVPVAGAVLLHEVGHLLRAHGVRGQSLPKPVQHVAWNYAADAEINDDLLAAG HEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHEEC IGLPDGVITPQSFGCEDGGIAEDYYTHLIDPATGQQFPDDDDVGCGSGAGCAPVPGELGA CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC AAGEVADGLDDAEADLVRRHVARAVQAAQGKGRGSAPAGLARWAGEVLTPPTVPWDRVLR HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH AVIRRALADQSGRTNYSYARPSRRSVPGIVAPAMRGPSITVSIVIDTSGSMSAADLSAAM HHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHH GEVAGVLRAGGVARERVRILSCDAASTSAQAVRSVADVVLVGGGGTDMRVGIDAANAARP HHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHHHCEEEECCCCCCEEEEECCCCCCCC APHVVIVLTDGDTPWPDRPSRAHLVCAVIGNDGALARTPAWASSVQIPVGAS CCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCEECCCCCC >Mature Secondary Structure SGVRALAPDELRAFRLARLVSAEQMPYFMRALFAAQPVAAPGLGTFAVDAQWRLYLDPA CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCH LLVGAGAWPVPVAGAVLLHEVGHLLRAHGVRGQSLPKPVQHVAWNYAADAEINDDLLAAG HEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHEEC IGLPDGVITPQSFGCEDGGIAEDYYTHLIDPATGQQFPDDDDVGCGSGAGCAPVPGELGA CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC AAGEVADGLDDAEADLVRRHVARAVQAAQGKGRGSAPAGLARWAGEVLTPPTVPWDRVLR HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH AVIRRALADQSGRTNYSYARPSRRSVPGIVAPAMRGPSITVSIVIDTSGSMSAADLSAAM HHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHH GEVAGVLRAGGVARERVRILSCDAASTSAQAVRSVADVVLVGGGGTDMRVGIDAANAARP HHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHHHCEEEECCCCCCEEEEECCCCCCCC APHVVIVLTDGDTPWPDRPSRAHLVCAVIGNDGALARTPAWASSVQIPVGAS CCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA