| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454724
Identifier: 77454724
GI number: 77454724
Start: 153587
End: 153913
Strand: Direct
Name: 77454724
Synonym: pREL1_0157
Alternate gene names: NA
Gene position: 153587-153913 (Clockwise)
Preceding gene: 77454723
Following gene: 77454725
Centisome position: 56.55
GC content: 63.61
Gene sequence:
>327_bases ATGTTCATTCCGGCAGTGGTCACCGCTTTTGTGCACTGGCTTCGCAGCGGCTACCCGCAGGACGCACCGAGATACGGTCA CAGCCCGCTACTGGCTCTGATGGATCAACGGCTCTCACCTGCGCAGATCAGTGAGATCGTGATCGCGCTCGACGGGGAGC CGGCCACCGAGGCCATCGACATCCAAGTGGCCATCACGGCTGTCGCACGGCGGATGCCCTCACCCGCCGATCTGAGTGCC GTATGCGCGGCCATCGAGAAATCCGCGTCCAGGGAAGGGGCCTTCCCGTGCTGCAGAACCAGAGGCGTGCCCCATGTTGC GAACTGA
Upstream 100 bases:
>100_bases TGACGAGATCGAACGGCGAGTACTCACATTGCTCGACGAGATCGACATCGCCGCCCAGCACTGATGCTCGTCGATGAATT CCTTGCGAAGAAGGTCTCTC
Downstream 100 bases:
>100_bases TTTGATCGATGTCAATATTGATGTATGTCGAATCAAGATGTGGCGGAGACCGGCGCCTGTTGTTCGCCACTCAACCGTGA ACCGTTGACCGAAGACTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MFIPAVVTAFVHWLRSGYPQDAPRYGHSPLLALMDQRLSPAQISEIVIALDGEPATEAIDIQVAITAVARRMPSPADLSA VCAAIEKSASREGAFPCCRTRGVPHVAN
Sequences:
>Translated_108_residues MFIPAVVTAFVHWLRSGYPQDAPRYGHSPLLALMDQRLSPAQISEIVIALDGEPATEAIDIQVAITAVARRMPSPADLSA VCAAIEKSASREGAFPCCRTRGVPHVAN >Mature_108_residues MFIPAVVTAFVHWLRSGYPQDAPRYGHSPLLALMDQRLSPAQISEIVIALDGEPATEAIDIQVAITAVARRMPSPADLSA VCAAIEKSASREGAFPCCRTRGVPHVAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11538; Mature: 11538
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIPAVVTAFVHWLRSGYPQDAPRYGHSPLLALMDQRLSPAQISEIVIALDGEPATEAID CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHEEEEECCCCCCHHHH IQVAITAVARRMPSPADLSAVCAAIEKSASREGAFPCCRTRGVPHVAN HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure MFIPAVVTAFVHWLRSGYPQDAPRYGHSPLLALMDQRLSPAQISEIVIALDGEPATEAID CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHEEEEECCCCCCHHHH IQVAITAVARRMPSPADLSAVCAAIEKSASREGAFPCCRTRGVPHVAN HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA