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The map label for this gene is copC [H]

Identifier: 77454694

GI number: 77454694

Start: 124594

End: 125148

Strand: Direct

Name: copC [H]

Synonym: pREL1_0127

Alternate gene names: 77454694

Gene position: 124594-125148 (Clockwise)

Preceding gene: 77454690

Following gene: 77454695

Centisome position: 45.88

GC content: 63.96

Gene sequence:

>555_bases
TTGAGGCGTGCAATGGTTGTGCTGCTGGTGGCTGCAGGGTGTGCGCTCATCGGCGCAGGCACCGCGCAAGCCCACAGTGC
GCTGGTCGGATCGACTCCATCCGCGGATGCAGCTCTCGATGCTGCACCTGTTTCCGTGGAATTGGTGTTCAACCAAGAGA
TTCAGACGAGTTTTGCGAACGTGACCGTCAGTACGGCCGACGGAACGCAGGTCGGGGCCGGGGATCCGTCAGTGCAGGGA
GAGCGCGTCTCTCTCTCCACGACCCCGCAGATGCCTTCGGGCACCTACACCGTGGGGTATCGCGTGATTTCCGAGGACGG
CCATCCGATCACAGGGTCCTATACCTTCACGTTGAACGTGGCACCGAACGCGGCGGCACCGTCTCCTGCAGGTGCTCTTC
CCTCTGTCACAGTCGCCCCGTCGGCAGCCACCGGTGAAACCGGCGCCGCCGACGGATCCCCACTGCTGCTGCCGATTCTC
GGTGGCGCCGTGGCGTTGCTGTTCGTGGTCGGAATGGTGATCGTCCTGCGCGGAGAGAAGCGCTCGAAGCGCTGA

Upstream 100 bases:

>100_bases
CAACATAGTAGTCGGAGGTAGTCTCTCAGCGAGATGCCGGTGTGCATCGATCGCCGGACTCCGCACCGTGATGGTGTGAG
CCGAGTAGGAGGAACAGATT

Downstream 100 bases:

>100_bases
ACCTGCAGCACAGTCGAGCGAGGACGGAAAGGCCAGGTCAGGTGATGGACTGGATACGACTTCCCGAGGCCGCACCCTCG
TTCGGTGAGATGGTCGGCTG

Product: putative copper resistance protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRRAMVVLLVAAGCALIGAGTAQAHSALVGSTPSADAALDAAPVSVELVFNQEIQTSFANVTVSTADGTQVGAGDPSVQG
ERVSLSTTPQMPSGTYTVGYRVISEDGHPITGSYTFTLNVAPNAAAPSPAGALPSVTVAPSAATGETGAADGSPLLLPIL
GGAVALLFVVGMVIVLRGEKRSKR

Sequences:

>Translated_184_residues
MRRAMVVLLVAAGCALIGAGTAQAHSALVGSTPSADAALDAAPVSVELVFNQEIQTSFANVTVSTADGTQVGAGDPSVQG
ERVSLSTTPQMPSGTYTVGYRVISEDGHPITGSYTFTLNVAPNAAAPSPAGALPSVTVAPSAATGETGAADGSPLLLPIL
GGAVALLFVVGMVIVLRGEKRSKR
>Mature_184_residues
MRRAMVVLLVAAGCALIGAGTAQAHSALVGSTPSADAALDAAPVSVELVFNQEIQTSFANVTVSTADGTQVGAGDPSVQG
ERVSLSTTPQMPSGTYTVGYRVISEDGHPITGSYTFTLNVAPNAAAPSPAGALPSVTVAPSAATGETGAADGSPLLLPIL
GGAVALLFVVGMVIVLRGEKRSKR

Specific function: Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopA [H]

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 18272; Mature: 18272

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAMVVLLVAAGCALIGAGTAQAHSALVGSTPSADAALDAAPVSVELVFNQEIQTSFAN
CCHHEEEHEEHHCHHEEECCCHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCHHCCEEE
VTVSTADGTQVGAGDPSVQGERVSLSTTPQMPSGTYTVGYRVISEDGHPITGSYTFTLNV
EEEECCCCCEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCEECCEEEEEEEE
APNAAAPSPAGALPSVTVAPSAATGETGAADGSPLLLPILGGAVALLFVVGMVIVLRGEK
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEECCH
RSKR
HCCC
>Mature Secondary Structure
MRRAMVVLLVAAGCALIGAGTAQAHSALVGSTPSADAALDAAPVSVELVFNQEIQTSFAN
CCHHEEEHEEHHCHHEEECCCHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCHHCCEEE
VTVSTADGTQVGAGDPSVQGERVSLSTTPQMPSGTYTVGYRVISEDGHPITGSYTFTLNV
EEEECCCCCEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCEECCEEEEEEEE
APNAAAPSPAGALPSVTVAPSAATGETGAADGSPLLLPILGGAVALLFVVGMVIVLRGEK
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEECCH
RSKR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]