Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
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Accession | NC_007435 |
Length | 3,181,762 |
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The map label for this gene is 76819359
Identifier: 76819359
GI number: 76819359
Start: 38625
End: 38984
Strand: Direct
Name: 76819359
Synonym: BURPS1710b_A0017
Alternate gene names: NA
Gene position: 38625-38984 (Clockwise)
Preceding gene: 76818254
Following gene: 76817390
Centisome position: 1.21
GC content: 70.28
Gene sequence:
>360_bases ATGATCAGGAATGTGCTGATTGCGCTCGTCTGCGCGGCGCCTGTCGCGGCGCTCGCCGAGCCGCCGAAGGCGGCGGGCGG CATGATCGTCGACGACGACGGCATGACGCTTTACACGTTCGACCGGGACACGATGCCCGGCAAGAGCGCATGCACGGGCG GCTGCACGGCGAACTGGCCGGCCGCGCTCGCCGACGCGTACGACAAGCCGGGCGGCGATCTCGGCTTCATCGCCGCCGCG GGCGGCAAGCATCAGTGGACGTACAAGGGGCGTCCGCTGTATCGGTTCTCCGGTGACGCGAAGCCGGGGCAGCATACCGG CGACGGCTTCGGCGGCATGTGGCACGTCGCGCGGCCGTGA
Upstream 100 bases:
>100_bases CGGCGACGACGTGCGGCTGCGCATCCGCGCCGAGTTTGTCAGGGCGCGCGCGGACCCGTGAGCCCGCGCGTCGGTTTTTC TTCATTCGAGGAGAGTCATC
Downstream 100 bases:
>100_bases CGGGCAAGGGCGGGGCGGCCGCGAACCCGCGCGCCGCGACGGCGATCGTCGTCGCGGCATCGGGTTCGATCAGCCCGGCG TCGCGCCGGACGGCGCTGTC
Product: putative lipoprotein
Products: NA
Alternate protein names: Secreted Repeat-Containing Protein; Transmembrane Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein; Blue Copper Domain Protein; Exported Protein; Signal Peptide Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MIRNVLIALVCAAPVAALAEPPKAAGGMIVDDDGMTLYTFDRDTMPGKSACTGGCTANWPAALADAYDKPGGDLGFIAAA GGKHQWTYKGRPLYRFSGDAKPGQHTGDGFGGMWHVARP
Sequences:
>Translated_119_residues MIRNVLIALVCAAPVAALAEPPKAAGGMIVDDDGMTLYTFDRDTMPGKSACTGGCTANWPAALADAYDKPGGDLGFIAAA GGKHQWTYKGRPLYRFSGDAKPGQHTGDGFGGMWHVARP >Mature_119_residues MIRNVLIALVCAAPVAALAEPPKAAGGMIVDDDGMTLYTFDRDTMPGKSACTGGCTANWPAALADAYDKPGGDLGFIAAA GGKHQWTYKGRPLYRFSGDAKPGQHTGDGFGGMWHVARP
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12383; Mature: 12383
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRNVLIALVCAAPVAALAEPPKAAGGMIVDDDGMTLYTFDRDTMPGKSACTGGCTANWP CHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC AALADAYDKPGGDLGFIAAAGGKHQWTYKGRPLYRFSGDAKPGQHTGDGFGGMWHVARP HHHHHHCCCCCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MIRNVLIALVCAAPVAALAEPPKAAGGMIVDDDGMTLYTFDRDTMPGKSACTGGCTANWP CHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC AALADAYDKPGGDLGFIAAAGGKHQWTYKGRPLYRFSGDAKPGQHTGDGFGGMWHVARP HHHHHHCCCCCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA