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The map label for this gene is 75674343

Identifier: 75674343

GI number: 75674343

Start: 168478

End: 169071

Strand: Direct

Name: 75674343

Synonym: Nwi_0144

Alternate gene names: NA

Gene position: 168478-169071 (Clockwise)

Preceding gene: 75674342

Following gene: 75674345

Centisome position: 4.95

GC content: 60.27

Gene sequence:

>594_bases
ATGTCAAATAGATTCGTCCGTCCGCTGATCCTGGTTGCGGCCTTCGCCGGCAGCCTTGTCGTCGGTCTCACGGTGGTGAT
GTGGCTACTCGGCGGGCTCGCCAGCAAACCCACGGCGGCGTCGATCGGTGGCCCATTCCAACTGACCGACCAGACGGGCC
AGACCGTCACCGAAAAGGATATGGTCGGCCGTCCGACGATCGTCTTCTTCGGCTATACTCATTGCCCCGACGTCTGCCCG
ACCTCGCTGTTCGAGATGTCGGAGGTGTTGCGGGCGATGGGTCCGGACGCCGACCGCGTCAATGCCTATTTCATCACCGT
TGATCCGGAACGCGACACCCAGGAAACGATGAAAAGCTATCTTTCCAGCTTCGATCCGCGTCTGAAAGGCTTGACCGGCG
ATCCGGCCGCCGTCGAAAAAGCCCTGTCCGGATTTCGGGTCTACGCAAAGAAGATCCCGCTGAAGGACGGCGGCTATTCG
ATGGATCATACGGCGCTGATCTATCTGATGGATCGCGACGGCCGCTTCGTCTCGTCGTTCGATCTCAAACGCTCGGCTGA
AGCCGCCGCCGCCGATCTCAGGCGTTATCTGTAG

Upstream 100 bases:

>100_bases
ATTCAATCAGAAGCGAAAATGCTCCAGGCCCGTTCCGCACGTTCCGATTGGTTGCTGCAAGAACGTGCGGCCTTCGGAAG
GGCGACACCGAGGATACCCG

Downstream 100 bases:

>100_bases
CGCTGCCGCCGGCGTGCGGCCATGTGGTGGGAAGCTGTCCCCTGAGAGGTGGCGGCTGACCTGATTTGCGGGGAAAGGCC
ATGCTCGGTCTTTTCCCACC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSNRFVRPLILVAAFAGSLVVGLTVVMWLLGGLASKPTAASIGGPFQLTDQTGQTVTEKDMVGRPTIVFFGYTHCPDVCP
TSLFEMSEVLRAMGPDADRVNAYFITVDPERDTQETMKSYLSSFDPRLKGLTGDPAAVEKALSGFRVYAKKIPLKDGGYS
MDHTALIYLMDRDGRFVSSFDLKRSAEAAAADLRRYL

Sequences:

>Translated_197_residues
MSNRFVRPLILVAAFAGSLVVGLTVVMWLLGGLASKPTAASIGGPFQLTDQTGQTVTEKDMVGRPTIVFFGYTHCPDVCP
TSLFEMSEVLRAMGPDADRVNAYFITVDPERDTQETMKSYLSSFDPRLKGLTGDPAAVEKALSGFRVYAKKIPLKDGGYS
MDHTALIYLMDRDGRFVSSFDLKRSAEAAAADLRRYL
>Mature_196_residues
SNRFVRPLILVAAFAGSLVVGLTVVMWLLGGLASKPTAASIGGPFQLTDQTGQTVTEKDMVGRPTIVFFGYTHCPDVCPT
SLFEMSEVLRAMGPDADRVNAYFITVDPERDTQETMKSYLSSFDPRLKGLTGDPAAVEKALSGFRVYAKKIPLKDGGYSM
DHTALIYLMDRDGRFVSSFDLKRSAEAAAADLRRYL

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=157, Percent_Identity=41.4012738853503, Blast_Score=124, Evalue=6e-29,
Organism=Homo sapiens, GI281182727, Length=162, Percent_Identity=40.1234567901235, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI281182722, Length=162, Percent_Identity=40.1234567901235, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI281182716, Length=162, Percent_Identity=40.1234567901235, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI153791313, Length=162, Percent_Identity=40.1234567901235, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17531419, Length=156, Percent_Identity=35.2564102564103, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6319511, Length=164, Percent_Identity=35.9756097560976, Blast_Score=112, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6319498, Length=161, Percent_Identity=32.9192546583851, Blast_Score=108, Evalue=6e-25,
Organism=Drosophila melanogaster, GI19920710, Length=157, Percent_Identity=38.2165605095541, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 21545; Mature: 21414

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRFVRPLILVAAFAGSLVVGLTVVMWLLGGLASKPTAASIGGPFQLTDQTGQTVTEKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEECHHH
MVGRPTIVFFGYTHCPDVCPTSLFEMSEVLRAMGPDADRVNAYFITVDPERDTQETMKSY
HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHH
LSSFDPRLKGLTGDPAAVEKALSGFRVYAKKIPLKDGGYSMDHTALIYLMDRDGRFVSSF
HHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEHH
DLKRSAEAAAADLRRYL
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNRFVRPLILVAAFAGSLVVGLTVVMWLLGGLASKPTAASIGGPFQLTDQTGQTVTEKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEECHHH
MVGRPTIVFFGYTHCPDVCPTSLFEMSEVLRAMGPDADRVNAYFITVDPERDTQETMKSY
HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHH
LSSFDPRLKGLTGDPAAVEKALSGFRVYAKKIPLKDGGYSMDHTALIYLMDRDGRFVSSF
HHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEHH
DLKRSAEAAAADLRRYL
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]