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The map label for this gene is yraN [C]

Identifier: 75674315

GI number: 75674315

Start: 136979

End: 137335

Strand: Direct

Name: yraN [C]

Synonym: Nwi_0116

Alternate gene names: 75674315

Gene position: 136979-137335 (Clockwise)

Preceding gene: 75674314

Following gene: 75674316

Centisome position: 4.03

GC content: 63.03

Gene sequence:

>357_bases
GTGCGCGTCGCGGCGTTTCACGCCGGTCTTTCAGCAGAAAGACGCGCCGCCGCCTATCTGATCGCCAAGGGCTACCGGAT
TCTGGCGCGCCGGTTTCGCACCCCCTATGGCGAGATCGATATCGTGGCCCGTCGGCGACAGCTTCTCGCCTTCGTCGAAG
TCAAGGCCCGCCGCAGTCTCGATGACGCCGCCTATGCGGTGACGCGGAAACAGCAGCAGAGGATCATCAACGCGGCTCAG
GCCTGGTTGATGGCGCACCCCGAACATGAGACCTTCGAGTTTCGCTTCGACGCCATGCTGATTGCACCGCGACGTCTGCC
GCGCCATCTGTTAGGTGCATTCGACGCCAGCACATAG

Upstream 100 bases:

>100_bases
TACGCCCGTGCGCTTGAGCTCGCCGGACAGATAAGAGACATTGGCGACAATGGCTGCAAGTAACGACCCTTCCCGAAACG
ACCCGGAGGCCGCAGCGCCC

Downstream 100 bases:

>100_bases
CCTCGGGCGCGCATAGACGGAATTCAACCGGACCAGCACACGATGAAACTGAAAGTCGCCGTTCAGATGGATCCGATCGC
GCGCATCAATATCCGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRVAAFHAGLSAERRAAAYLIAKGYRILARRFRTPYGEIDIVARRRQLLAFVEVKARRSLDDAAYAVTRKQQQRIINAAQ
AWLMAHPEHETFEFRFDAMLIAPRRLPRHLLGAFDAST

Sequences:

>Translated_118_residues
MRVAAFHAGLSAERRAAAYLIAKGYRILARRFRTPYGEIDIVARRRQLLAFVEVKARRSLDDAAYAVTRKQQQRIINAAQ
AWLMAHPEHETFEFRFDAMLIAPRRLPRHLLGAFDAST
>Mature_118_residues
MRVAAFHAGLSAERRAAAYLIAKGYRILARRFRTPYGEIDIVARRRQLLAFVEVKARRSLDDAAYAVTRKQQQRIINAAQ
AWLMAHPEHETFEFRFDAMLIAPRRLPRHLLGAFDAST

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y116_NITWN (Q3SWF7)

Other databases:

- EMBL:   CP000115
- RefSeq:   YP_316736.1
- ProteinModelPortal:   Q3SWF7
- STRING:   Q3SWF7
- GeneID:   3675883
- GenomeReviews:   CP000115_GR
- KEGG:   nwi:Nwi_0116
- NMPDR:   fig|323098.3.peg.505
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QRYDIVA
- ProtClustDB:   PRK12497
- BioCyc:   NWIN323098:NWI_0116-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13580; Mature: 13580

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAAFHAGLSAERRAAAYLIAKGYRILARRFRTPYGEIDIVARRRQLLAFVEVKARRSL
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDAAYAVTRKQQQRIINAAQAWLMAHPEHETFEFRFDAMLIAPRRLPRHLLGAFDAST
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRVAAFHAGLSAERRAAAYLIAKGYRILARRFRTPYGEIDIVARRRQLLAFVEVKARRSL
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDAAYAVTRKQQQRIINAAQAWLMAHPEHETFEFRFDAMLIAPRRLPRHLLGAFDAST
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA