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The map label for this gene is ybbN [H]

Identifier: 75674272

GI number: 75674272

Start: 87836

End: 88846

Strand: Direct

Name: ybbN [H]

Synonym: Nwi_0073

Alternate gene names: 75674272

Gene position: 87836-88846 (Clockwise)

Preceding gene: 75674269

Following gene: 75674273

Centisome position: 2.58

GC content: 64.79

Gene sequence:

>1011_bases
GTGCTGGCCAAGCATCGGCGAACGTCGGATAACGGCACCAGACCGCTCATTCCGGGGACATCAGGCGAGGATCACGTGAC
CATAGTCGAGCACGACGGCGGGCCGCCACCACAGGCGCCGGATCTGATCAACGAGACGACGACGCAGACCTTCATGAAGG
ATGTCGTCGAGGAATCGATGCACCAGCCGGTGCTGGTCGATTTCTGGGCGCCGCGGAGCGGACCGAGCCGCCAACTGAGC
CCGCTGCTGGAAAAGGCGGTGCGCGCCGCCGCCGGCAAGGTCAAGCTGGCGAAGATGAATATCGATCAGCATCCCGCCAT
CTTTCAGCAGCTCGCGGCCCAGATCGGCAGCCATTCGATCCCGGCGGTGTTCGCCTTCGTCGGCGGGCGGCCGGTCGATT
ATTTCACAGGCGCGGTCCCCGAAAGCCAGGTCAAGGACTTCATCGACAAGCTGACGCAAGGCGCGGGGGCGGCGCCGGGC
GCCCCTAACATCGAAGAGATCCTGCAAGAGGCTGACGCCGCGCTCGCTGCAGGCGATCCGGCCACCGCGGCCGCGGTTTA
TGCCGAGGCTCTCGGGATCGACGCCGCCAATCTTCGGGCGATCGCCGGGCTGGCGCGCTGCTATGCCAGCACCGGCGCGA
TCGACAAGGCCAAGCAAACGCTCGCGCTGGTTCCGGAATCGAAGCGTGGCGACGCCGCCGTGACAACCGTTCAGGCCATG
ATCGACCTTGCCGAACAGGCGAGCTCGCTTGGACCGATCGCCGAGCTTGAGCAGAAGGTCGCGGCCGACCCGCTCGATCA
TCAGGCACGCTTCGACCTGGCTACGGCATTGAACGCCGGCGGCAAACGCAGCGAGGCCACCGATCACCTGCTTGAAATCG
TGAAGCGCGATCGCAAATGGAACGATGATGCCGCCCGCAAGCAGCTTGTGCAGTTTTTCGAGGCATGGGGCGCCACAGAC
GAGGCCACCGTGGAGGGGCGCAAACGACTGTCGACGATTCTGTTTTCCTAA

Upstream 100 bases:

>100_bases
CGGAGCGTGCTAGCGTGACGGTTCAGACTTTGCTTCGTCTCGGCGCTTTCGCCTCGGCGAAATCCCAGCGAGTTGCCGAT
GACGGGGTTTACGTCTCGGA

Downstream 100 bases:

>100_bases
AGCGGGGATGAGGAAAAGTGTGGTGCGGTTTCCGCCCTCATCCCGCGTCTCAGAATACTGCAATCGATCACGTTCATGGT
TCTGGATCGAATCGATCAAA

Product: thioredoxin-related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLAKHRRTSDNGTRPLIPGTSGEDHVTIVEHDGGPPPQAPDLINETTTQTFMKDVVEESMHQPVLVDFWAPRSGPSRQLS
PLLEKAVRAAAGKVKLAKMNIDQHPAIFQQLAAQIGSHSIPAVFAFVGGRPVDYFTGAVPESQVKDFIDKLTQGAGAAPG
APNIEEILQEADAALAAGDPATAAAVYAEALGIDAANLRAIAGLARCYASTGAIDKAKQTLALVPESKRGDAAVTTVQAM
IDLAEQASSLGPIAELEQKVAADPLDHQARFDLATALNAGGKRSEATDHLLEIVKRDRKWNDDAARKQLVQFFEAWGATD
EATVEGRKRLSTILFS

Sequences:

>Translated_336_residues
MLAKHRRTSDNGTRPLIPGTSGEDHVTIVEHDGGPPPQAPDLINETTTQTFMKDVVEESMHQPVLVDFWAPRSGPSRQLS
PLLEKAVRAAAGKVKLAKMNIDQHPAIFQQLAAQIGSHSIPAVFAFVGGRPVDYFTGAVPESQVKDFIDKLTQGAGAAPG
APNIEEILQEADAALAAGDPATAAAVYAEALGIDAANLRAIAGLARCYASTGAIDKAKQTLALVPESKRGDAAVTTVQAM
IDLAEQASSLGPIAELEQKVAADPLDHQARFDLATALNAGGKRSEATDHLLEIVKRDRKWNDDAARKQLVQFFEAWGATD
EATVEGRKRLSTILFS
>Mature_336_residues
MLAKHRRTSDNGTRPLIPGTSGEDHVTIVEHDGGPPPQAPDLINETTTQTFMKDVVEESMHQPVLVDFWAPRSGPSRQLS
PLLEKAVRAAAGKVKLAKMNIDQHPAIFQQLAAQIGSHSIPAVFAFVGGRPVDYFTGAVPESQVKDFIDKLTQGAGAAPG
APNIEEILQEADAALAAGDPATAAAVYAEALGIDAANLRAIAGLARCYASTGAIDKAKQTLALVPESKRGDAAVTTVQAM
IDLAEQASSLGPIAELEQKVAADPLDHQARFDLATALNAGGKRSEATDHLLEIVKRDRKWNDDAARKQLVQFFEAWGATD
EATVEGRKRLSTILFS

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=294, Percent_Identity=29.5918367346939, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788936, Length=88, Percent_Identity=34.0909090909091, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082331, Length=109, Percent_Identity=33.9449541284404, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212646193, Length=103, Percent_Identity=37.8640776699029, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 35707; Mature: 35707

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKHRRTSDNGTRPLIPGTSGEDHVTIVEHDGGPPPQAPDLINETTTQTFMKDVVEESM
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HQPVLVDFWAPRSGPSRQLSPLLEKAVRAAAGKVKLAKMNIDQHPAIFQQLAAQIGSHSI
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCH
PAVFAFVGGRPVDYFTGAVPESQVKDFIDKLTQGAGAAPGAPNIEEILQEADAALAAGDP
HHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
ATAAAVYAEALGIDAANLRAIAGLARCYASTGAIDKAKQTLALVPESKRGDAAVTTVQAM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
IDLAEQASSLGPIAELEQKVAADPLDHQARFDLATALNAGGKRSEATDHLLEIVKRDRKW
HHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
NDDAARKQLVQFFEAWGATDEATVEGRKRLSTILFS
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAKHRRTSDNGTRPLIPGTSGEDHVTIVEHDGGPPPQAPDLINETTTQTFMKDVVEESM
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HQPVLVDFWAPRSGPSRQLSPLLEKAVRAAAGKVKLAKMNIDQHPAIFQQLAAQIGSHSI
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCH
PAVFAFVGGRPVDYFTGAVPESQVKDFIDKLTQGAGAAPGAPNIEEILQEADAALAAGDP
HHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
ATAAAVYAEALGIDAANLRAIAGLARCYASTGAIDKAKQTLALVPESKRGDAAVTTVQAM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
IDLAEQASSLGPIAELEQKVAADPLDHQARFDLATALNAGGKRSEATDHLLEIVKRDRKW
HHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
NDDAARKQLVQFFEAWGATDEATVEGRKRLSTILFS
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]