| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is glmU [H]
Identifier: 75674247
GI number: 75674247
Start: 55254
End: 55979
Strand: Direct
Name: glmU [H]
Synonym: Nwi_0048
Alternate gene names: 75674247
Gene position: 55254-55979 (Clockwise)
Preceding gene: 75674246
Following gene: 75674248
Centisome position: 1.62
GC content: 68.04
Gene sequence:
>726_bases ATGCCGACCACTCCCACCAAAGCCATGGTGCTCGCCGCGGGCCTCGGCCTGCGCATGCGGCCGCTGACCGAACGGATGCC CAAGCCCATGGTGCCCGTGGCCGGCAAGCCGCTGCTCGATCACGTGCTGGACAGGCTGGCGGACGCGGGCGTCAGCGAGG CTGTCGTCAACGTGCGCTATCTGCCCGACCAGATCATCGATCACGTCGCTCACCGCGACCGGCCGAAGATCATCATCTCC GACGAGCGCGACCAGGTGCTTGGCACCGGCGGTGCGGTGGTGAAGGCCCTGCCGCTGCTCGGCGACGCACCGTTCTTCCA TCTCAATGCCGACACGATATGGATCGACGGCGCGCGTCCCAACCTGACGCGGCTGACCGAGGCCTTCGATCCCGCGAGCA TGGACATTCTGCTGCTGATGGCGCCGACCGCGAGCAGCATCGGCTACAGCGGCAGCGGCGACTACGCCATGCTCCCCAAC GGAGCGCTTCGCAGGCGACAAGAGAACCAGATCGTGCCGTTCGTCTATGCGGGAGCCGCCATCCTGTCGCCCGCGCTGTT CGACGGCGCGCCGGCAGGCGAGTTTCCGCTGACCGCGATATTCGACCGGGCGGGTGAACGGGACCGGCTGTTCGGCCTGC GGCTCGACGGCGTCTGGATGCATGTCGGAACACCCGATGCGGTCCAGGCCGCGGAGAAAGCCGTGCTCGCGAGCCTCGAC GCCTGA
Upstream 100 bases:
>100_bases CACACTAAAATCATAAAGTTGCTGGTGTGCCTTTGATTCCGAAGTTTGCATCAAAGGTTGCGACAAGGGTACGCGAACTT CGGAATCGGGACTCCAGAAC
Downstream 100 bases:
>100_bases CGGCTGCCTTTCAAATCTTCACCGCTTCCGGAGGATTCTCCGGCGAAGTGGATTCCACTTCGCCCGAAGGTTAAATCCCG CCTATGTCATGATATGCCTG
Product: nucleotidyl transferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPTTPTKAMVLAAGLGLRMRPLTERMPKPMVPVAGKPLLDHVLDRLADAGVSEAVVNVRYLPDQIIDHVAHRDRPKIIIS DERDQVLGTGGAVVKALPLLGDAPFFHLNADTIWIDGARPNLTRLTEAFDPASMDILLLMAPTASSIGYSGSGDYAMLPN GALRRRQENQIVPFVYAGAAILSPALFDGAPAGEFPLTAIFDRAGERDRLFGLRLDGVWMHVGTPDAVQAAEKAVLASLD A
Sequences:
>Translated_241_residues MPTTPTKAMVLAAGLGLRMRPLTERMPKPMVPVAGKPLLDHVLDRLADAGVSEAVVNVRYLPDQIIDHVAHRDRPKIIIS DERDQVLGTGGAVVKALPLLGDAPFFHLNADTIWIDGARPNLTRLTEAFDPASMDILLLMAPTASSIGYSGSGDYAMLPN GALRRRQENQIVPFVYAGAAILSPALFDGAPAGEFPLTAIFDRAGERDRLFGLRLDGVWMHVGTPDAVQAAEKAVLASLD A >Mature_240_residues PTTPTKAMVLAAGLGLRMRPLTERMPKPMVPVAGKPLLDHVLDRLADAGVSEAVVNVRYLPDQIIDHVAHRDRPKIIISD ERDQVLGTGGAVVKALPLLGDAPFFHLNADTIWIDGARPNLTRLTEAFDPASMDILLLMAPTASSIGYSGSGDYAMLPNG ALRRRQENQIVPFVYAGAAILSPALFDGAPAGEFPLTAIFDRAGERDRLFGLRLDGVWMHVGTPDAVQAAEKAVLASLDA
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761619, Length=240, Percent_Identity=28.3333333333333, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI11761621, Length=240, Percent_Identity=28.3333333333333, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI133931050, Length=235, Percent_Identity=29.3617021276596, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320148, Length=257, Percent_Identity=26.0700389105058, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355443, Length=254, Percent_Identity=25.5905511811024, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24644084, Length=254, Percent_Identity=25.5905511811024, Blast_Score=82, Evalue=3e-16,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 25806; Mature: 25675
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTPTKAMVLAAGLGLRMRPLTERMPKPMVPVAGKPLLDHVLDRLADAGVSEAVVNVRY CCCCCHHHHHHHHCCCCEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEE LPDQIIDHVAHRDRPKIIISDERDQVLGTGGAVVKALPLLGDAPFFHLNADTIWIDGARP CCHHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHHHCCCCCEEEECCCEEEEECCCC NLTRLTEAFDPASMDILLLMAPTASSIGYSGSGDYAMLPNGALRRRQENQIVPFVYAGAA CHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHCCCCCCCEEEHHHH ILSPALFDGAPAGEFPLTAIFDRAGERDRLFGLRLDGVWMHVGTPDAVQAAEKAVLASLD HHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCC A C >Mature Secondary Structure PTTPTKAMVLAAGLGLRMRPLTERMPKPMVPVAGKPLLDHVLDRLADAGVSEAVVNVRY CCCCHHHHHHHHCCCCEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEE LPDQIIDHVAHRDRPKIIISDERDQVLGTGGAVVKALPLLGDAPFFHLNADTIWIDGARP CCHHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHHHCCCCCEEEECCCEEEEECCCC NLTRLTEAFDPASMDILLLMAPTASSIGYSGSGDYAMLPNGALRRRQENQIVPFVYAGAA CHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHCCCCCCCEEEHHHH ILSPALFDGAPAGEFPLTAIFDRAGERDRLFGLRLDGVWMHVGTPDAVQAAEKAVLASLD HHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]