| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is fur [C]
Identifier: 75674234
GI number: 75674234
Start: 39551
End: 40057
Strand: Direct
Name: fur [C]
Synonym: Nwi_0035
Alternate gene names: 75674234
Gene position: 39551-40057 (Clockwise)
Preceding gene: 75674230
Following gene: 75674236
Centisome position: 1.16
GC content: 60.75
Gene sequence:
>507_bases ATGCCTGGCGTGAGTACAAGCGAGAACATCGTGGTTGTGACCGAAGAGGATCGTGATATCGCGGCGATCGGTCACGGACG GCAGCCGACTTTGACGGGCTGCCCCTGGCACGACGTCAACGAAATGCTGCAATCGGTCGGGCTGCGGCCGACGCGGCAGC GCATGGCGCTGGGCTGGCTGCTGTTCGGCAAGGGCGCGCGCCACCTCACGGCGGAAATGCTTTACGAAGAAGCGACCCTC GCCAAGGTTCCCGTCTCGCTGGCCACCGTCTACAATACGCTCAATCAACTGACCGACGCCGGATTGTTGCGCCAGGTCAG CGTTGACGGCACCAAGACCTATTTCGATACCAACGTCACCGCCCACCACCACTTCTACCTCGAAAACAATCACGAGCTGG TCGACATTCCCGATCCGCATCTGGTGTTGCAGAAGATGCCGAACGTGCCGGAAGGTTACGAGATCAGCCGCATCGACATG GTCGTGCGCCTGCGCAAGAAGCGCTGA
Upstream 100 bases:
>100_bases TTCTAGTTGCGAAAAACTTGCATCTGAACGCCTTTGTTCCTATAGTTTGAGATAGTTGGTCCCTATAGGGACTGTTGACG GCTGGATAAGAGCTTTTCGA
Downstream 100 bases:
>100_bases ACCGCCGCACGGCCTCGATCGCGTTCGCATTGCCCGGCCCTGCGCCGGGCATTTGTTTTTTGTGAGAGGTGTGTTTGTGC GAGAGGCGCCTGGGGCGTTT
Product: ferric-uptake regulator
Products: NA
Alternate protein names: Ferric Uptake Regulator Fur Family; Transcriptional Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Fe2+/Zn2+ Uptake Regulation Protein; Iron Response Regulator; Ferric Uptake Regulator; Fur Family Ferric Uptake Regulator; Fur Family Transcriptional Regulator; Ferric Uptake Regulator FUR Family; Transcriptional Regulator Fur Family Protein; Ferric Uptake Regulation Protein; Peroxide Stress Regulator; Iron Response Regulator Irr; Transcription Regulator; Transcriptional Regulator; Iron Transcriptional Regulator Protein; Ferric Uptake Transcriptional Regulator
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPGVSTSENIVVVTEEDRDIAAIGHGRQPTLTGCPWHDVNEMLQSVGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATL AKVPVSLATVYNTLNQLTDAGLLRQVSVDGTKTYFDTNVTAHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDM VVRLRKKR
Sequences:
>Translated_168_residues MPGVSTSENIVVVTEEDRDIAAIGHGRQPTLTGCPWHDVNEMLQSVGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATL AKVPVSLATVYNTLNQLTDAGLLRQVSVDGTKTYFDTNVTAHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDM VVRLRKKR >Mature_167_residues PGVSTSENIVVVTEEDRDIAAIGHGRQPTLTGCPWHDVNEMLQSVGLRPTRQRMALGWLLFGKGARHLTAEMLYEEATLA KVPVSLATVYNTLNQLTDAGLLRQVSVDGTKTYFDTNVTAHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDMV VRLRKKR
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18925; Mature: 18794
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVSTSENIVVVTEEDRDIAAIGHGRQPTLTGCPWHDVNEMLQSVGLRPTRQRMALGWL CCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHE LFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAGLLRQVSVDGTKTYFDTNVT EECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCE AHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDMVVRLRKKR EEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PGVSTSENIVVVTEEDRDIAAIGHGRQPTLTGCPWHDVNEMLQSVGLRPTRQRMALGWL CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHE LFGKGARHLTAEMLYEEATLAKVPVSLATVYNTLNQLTDAGLLRQVSVDGTKTYFDTNVT EECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCE AHHHFYLENNHELVDIPDPHLVLQKMPNVPEGYEISRIDMVVRLRKKR EEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA