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The map label for this gene is pcaC [H]

Identifier: 73539518

GI number: 73539518

Start: 2525597

End: 2525989

Strand: Direct

Name: pcaC [H]

Synonym: Reut_B5696

Alternate gene names: 73539518

Gene position: 2525597-2525989 (Clockwise)

Preceding gene: 73539515

Following gene: 73539519

Centisome position: 92.64

GC content: 59.03

Gene sequence:

>393_bases
ATGAGCGCCGAACGTTACAAGCAAGGTTTGCGGATGCTGGCTGCCGTCGATGGTGAGACGGGCATCGAGGTCGTCGAAAC
GCTGGCAAAATCGTTTCCGGTCTTTGCACGGTATGTGGTCGAGTTTCCGTTTGGCGACATCTACTCCCGGGGTGGGCTCG
GCTTGCGGGAAAGGGAGTTGGCTACCGTCGCGGCGCTTTGCGCGCTAGGCAATGCGTTACCGCAGCTTCGTGTGCATGTC
CATGCCGCATTGCATGTCGGTTGCAAGCCGGCGGAGGTCGTGGAAGCGGTAATGCAGATGGCGGTCTATGCAGGATTTCC
GGCAGCGTTGAACGGACTGTCCGTCGTACGGGAGGTATTCGCCGAGAAAGGGATCGCGTTACCGTTGGATTGA

Upstream 100 bases:

>100_bases
GAGGCGTTCTGACATATCAAAAAGGTATCACGATATTGATCATTCCGCACGTTCGAAGCGTGCCATACAGTCGTCGTACC
AACACTTCTGGAGAAAAACT

Downstream 100 bases:

>100_bases
GTTCACGGTGTGCAAAGGAAGGCGGCAGCCGCTCTCCGTTATAGCATTGGGCCAGCCAGCGTGATGGGAGGCTACCGCTG
GGGTTTCACTGAGTTCGCGA

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSAERYKQGLRMLAAVDGETGIEVVETLAKSFPVFARYVVEFPFGDIYSRGGLGLRERELATVAALCALGNALPQLRVHV
HAALHVGCKPAEVVEAVMQMAVYAGFPAALNGLSVVREVFAEKGIALPLD

Sequences:

>Translated_130_residues
MSAERYKQGLRMLAAVDGETGIEVVETLAKSFPVFARYVVEFPFGDIYSRGGLGLRERELATVAALCALGNALPQLRVHV
HAALHVGCKPAEVVEAVMQMAVYAGFPAALNGLSVVREVFAEKGIALPLD
>Mature_129_residues
SAERYKQGLRMLAAVDGETGIEVVETLAKSFPVFARYVVEFPFGDIYSRGGLGLRERELATVAALCALGNALPQLRVHVH
AALHVGCKPAEVVEAVMQMAVYAGFPAALNGLSVVREVFAEKGIALPLD

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13899; Mature: 13768

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAERYKQGLRMLAAVDGETGIEVVETLAKSFPVFARYVVEFPFGDIYSRGGLGLREREL
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHCCCCCCCHHHHH
ATVAALCALGNALPQLRVHVHAALHVGCKPAEVVEAVMQMAVYAGFPAALNGLSVVREVF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AEKGIALPLD
HHCCCCCCCC
>Mature Secondary Structure 
SAERYKQGLRMLAAVDGETGIEVVETLAKSFPVFARYVVEFPFGDIYSRGGLGLREREL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHCCCCCCCHHHHH
ATVAALCALGNALPQLRVHVHAALHVGCKPAEVVEAVMQMAVYAGFPAALNGLSVVREVF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AEKGIALPLD
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]