| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is fabG [H]
Identifier: 73539410
GI number: 73539410
Start: 2406245
End: 2406976
Strand: Direct
Name: fabG [H]
Synonym: Reut_B5588
Alternate gene names: 73539410
Gene position: 2406245-2406976 (Clockwise)
Preceding gene: 73539409
Following gene: 73539411
Centisome position: 88.27
GC content: 68.31
Gene sequence:
>732_bases ATGTCTCTTCCCAACGCCACGATCGTCACCGGCGCCAGTTCCGGTATCGGGCGCGCCATCAGCGAAATGCTGCTGGCAGA CGGCAATACCCGGGTGGTCAATATCGACTACACCGAGCCGGGCTGGTCGCACCCTAACATGACCTTTTTCCAGGCTGACC TGACCAATGCCGAGGCGACACGCGCCGTGGCGGAGCAGGTCACCTCGCAGTTCGACGTCACGCGGCTCGTGAACAACGCG GGCGCCACGCGTCCGGGCACGGCCGATTCGGCCACCGTGGCCGACCTCGACTATGTCGTCGGCCTGCACTTGCAGGCGGC CATGCTGCTCACGCAGGCATGCCTGCCTGCGATGCGCGCCGCCGGGTTCGGCCGCGTGGTCAACATGGCTTCGCGCGCGG CGCTGGGCAAGCCCGAGCGCGTGGTGTACTCGGCGACCAAGGCCGGGCTGATCGGCATGACCCGTACGCTGGCCATGGAG CTCGGCGGCGACGGCATCACCGTGAACGCGGTGGCGCCGGGCCCGATCGCCACGGAGCTGTTCCGCAAGAGCAATCCCGA AGGCAGCGAGCAGACCCGCCGCATCCTCGCGAGCATCGCCGTGAAGCGCATGGGCACGCCGGAAGACGTGGCACGCGCCG CGCTGTTCTTCCTGTCGCCCGACAACGGGTTCGTCACGGGGCAAGTGCTCTACGTGTGCGGCGGCACCACGCTTGGCGTG GCACCGGTCTGA
Upstream 100 bases:
>100_bases GCTGCAGGGCCGACAGGCTCGCCGGTCCGGCGGCATGTAGTGAGTGAAGTCGCGATTGTTTGCAAGATCCGGTCCACGAG CGGCCGGAGCGGAGTTGAAG
Downstream 100 bases:
>100_bases GGCGCACGCCTGCTCAAGCATTCAAATAGAACAGACGTTATTAAAACGTCATATCAGGATGTGATCCTTTTCCCATGGGC CACATCCGGCGAGGACAGCG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSLPNATIVTGASSGIGRAISEMLLADGNTRVVNIDYTEPGWSHPNMTFFQADLTNAEATRAVAEQVTSQFDVTRLVNNA GATRPGTADSATVADLDYVVGLHLQAAMLLTQACLPAMRAAGFGRVVNMASRAALGKPERVVYSATKAGLIGMTRTLAME LGGDGITVNAVAPGPIATELFRKSNPEGSEQTRRILASIAVKRMGTPEDVARAALFFLSPDNGFVTGQVLYVCGGTTLGV APV
Sequences:
>Translated_243_residues MSLPNATIVTGASSGIGRAISEMLLADGNTRVVNIDYTEPGWSHPNMTFFQADLTNAEATRAVAEQVTSQFDVTRLVNNA GATRPGTADSATVADLDYVVGLHLQAAMLLTQACLPAMRAAGFGRVVNMASRAALGKPERVVYSATKAGLIGMTRTLAME LGGDGITVNAVAPGPIATELFRKSNPEGSEQTRRILASIAVKRMGTPEDVARAALFFLSPDNGFVTGQVLYVCGGTTLGV APV >Mature_242_residues SLPNATIVTGASSGIGRAISEMLLADGNTRVVNIDYTEPGWSHPNMTFFQADLTNAEATRAVAEQVTSQFDVTRLVNNAG ATRPGTADSATVADLDYVVGLHLQAAMLLTQACLPAMRAAGFGRVVNMASRAALGKPERVVYSATKAGLIGMTRTLAMEL GGDGITVNAVAPGPIATELFRKSNPEGSEQTRRILASIAVKRMGTPEDVARAALFFLSPDNGFVTGQVLYVCGGTTLGVA PV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=35.2226720647773, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=33.0645161290323, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=28.968253968254, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI66933014, Length=203, Percent_Identity=30.5418719211823, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=31.0924369747899, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI59889578, Length=220, Percent_Identity=31.8181818181818, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=30.1587301587302, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=29.8755186721992, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI7705925, Length=237, Percent_Identity=31.2236286919831, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1787335, Length=236, Percent_Identity=33.8983050847458, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=30.9236947791165, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87082160, Length=240, Percent_Identity=32.5, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1789208, Length=238, Percent_Identity=29.8319327731092, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=32.2175732217573, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=30.2040816326531, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=27.8225806451613, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=27.1604938271605, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI2367365, Length=232, Percent_Identity=28.448275862069, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786812, Length=242, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=28.8065843621399, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789057, Length=219, Percent_Identity=26.027397260274, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17561402, Length=243, Percent_Identity=29.2181069958848, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=31.8367346938775, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=30.0411522633745, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=30, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17555706, Length=241, Percent_Identity=31.5352697095436, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=30.241935483871, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=29.718875502008, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=30.2681992337165, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=28.1853281853282, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562904, Length=256, Percent_Identity=28.90625, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=28.0155642023346, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=26.4591439688716, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=28.1853281853282, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=28.0769230769231, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=28.4615384615385, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=27.6264591439689, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=27.1317829457364, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=248, Percent_Identity=29.8387096774194, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324126, Length=186, Percent_Identity=29.5698924731183, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=192, Percent_Identity=30.2083333333333, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639444, Length=240, Percent_Identity=31.6666666666667, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=32.6612903225806, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=30.1652892561983, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24643142, Length=237, Percent_Identity=29.535864978903, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24644339, Length=244, Percent_Identity=28.6885245901639, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571526, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=29.3172690763052, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI221331216, Length=241, Percent_Identity=31.1203319502075, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24665247, Length=241, Percent_Identity=31.1203319502075, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24644337, Length=195, Percent_Identity=32.8205128205128, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI18859837, Length=186, Percent_Identity=30.1075268817204, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221331218, Length=240, Percent_Identity=30, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665243, Length=240, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25300; Mature: 25169
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPNATIVTGASSGIGRAISEMLLADGNTRVVNIDYTEPGWSHPNMTFFQADLTNAEAT CCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHH RAVAEQVTSQFDVTRLVNNAGATRPGTADSATVADLDYVVGLHLQAAMLLTQACLPAMRA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFGRVVNMASRAALGKPERVVYSATKAGLIGMTRTLAMELGGDGITVNAVAPGPIATEL CCHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHEECCCCEEEEEECCCHHHHHH FRKSNPEGSEQTRRILASIAVKRMGTPEDVARAALFFLSPDNGFVTGQVLYVCGGTTLGV HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCEEEEEEEEEECCCEECC APV CCC >Mature Secondary Structure SLPNATIVTGASSGIGRAISEMLLADGNTRVVNIDYTEPGWSHPNMTFFQADLTNAEAT CCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHH RAVAEQVTSQFDVTRLVNNAGATRPGTADSATVADLDYVVGLHLQAAMLLTQACLPAMRA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFGRVVNMASRAALGKPERVVYSATKAGLIGMTRTLAMELGGDGITVNAVAPGPIATEL CCHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHHHEECCCCEEEEEECCCHHHHHH FRKSNPEGSEQTRRILASIAVKRMGTPEDVARAALFFLSPDNGFVTGQVLYVCGGTTLGV HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCEEEEEEEEEECCCEECC APV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]