Click here to switch to the map view.

The map label for this gene is ycfJ [C]

Identifier: 73539397

GI number: 73539397

Start: 2392352

End: 2393005

Strand: Direct

Name: ycfJ [C]

Synonym: Reut_B5575

Alternate gene names: 73539397

Gene position: 2392352-2393005 (Clockwise)

Preceding gene: 73539396

Following gene: 73539401

Centisome position: 87.76

GC content: 66.67

Gene sequence:

>654_bases
ATGTCCATCCCCTTTCGTTCCGTTGTGCTTGCGGTGCTCGGTGCCGGCGCGCTCGCCGGTTGCGTGACTGCGCCTTATGG
CGGATACGCGGGCGGTTATTCGGGTGGGTACTCCGGAGGCTATGGTTCCGGTGCGGTAACGCAGACGGGGTATCCGCAGT
CGTCTTATCCGCAGGCGGCCTATCCCCAGCAGGGATATCCGCAGGCAAGCTACCCGCAACAAGGCTACCCGCAGCAAGGC
TATCCCCAGCAGGGCGGCTACCAGCAGGGGTATCCCGCCGACAGCGGCTACGGCAGCACCGGCGCCGATCAGTATGGTGT
CCGCTATGGATGGGTCGAGTCCATCGAAGTCGTGTCGGGGCAAGCGGCTTCGACCAGTGGTGCCGGTGCCGTGGTCGGCG
GCATCGTTGGCGGCCTGCTCGGCCACCAGGTCGGTGGCGGACGCGGCAACACCGTGGCGACCATCGGTGGCGCGGTGGCT
GGCGCGCTGGCCGGCAACGAAGTGGAGAAGCGCGGCAGCGCGGTGCCGCCCGCCTATCGCGTGCGCGTTCGGACCAATGA
CAATGCCTATCTGACCGTGACGCAGGCCAATCCGTACCAACTGCGGAATGGCGACCGGGTGCGGGTGGAGAATGGCGTAG
CCGTGCCGTATTGA

Upstream 100 bases:

>100_bases
AGGCGGTTACCAATCACAATTTGTAGTGACACCCGCCGCGCTCCGCCGGCTCTAGACTCGCGCGCATTCCCAACTCGCGA
AATCCGCAGGAGCCGTTTCC

Downstream 100 bases:

>100_bases
GGCCGAGACAGGCGCTCGTCAATGCGGCGGGCGCCGTATCTGGCGAGTGGCCCCGCCAGACACACCTTGCCCGCAGACTG
TCCCGCTATCGTCCCGTTCC

Product: surface antigen protein

Products: NA

Alternate protein names: Membrane Surface Antigen; Surface Antigen

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSIPFRSVVLAVLGAGALAGCVTAPYGGYAGGYSGGYSGGYGSGAVTQTGYPQSSYPQAAYPQQGYPQASYPQQGYPQQG
YPQQGGYQQGYPADSGYGSTGADQYGVRYGWVESIEVVSGQAASTSGAGAVVGGIVGGLLGHQVGGGRGNTVATIGGAVA
GALAGNEVEKRGSAVPPAYRVRVRTNDNAYLTVTQANPYQLRNGDRVRVENGVAVPY

Sequences:

>Translated_217_residues
MSIPFRSVVLAVLGAGALAGCVTAPYGGYAGGYSGGYSGGYGSGAVTQTGYPQSSYPQAAYPQQGYPQASYPQQGYPQQG
YPQQGGYQQGYPADSGYGSTGADQYGVRYGWVESIEVVSGQAASTSGAGAVVGGIVGGLLGHQVGGGRGNTVATIGGAVA
GALAGNEVEKRGSAVPPAYRVRVRTNDNAYLTVTQANPYQLRNGDRVRVENGVAVPY
>Mature_216_residues
SIPFRSVVLAVLGAGALAGCVTAPYGGYAGGYSGGYSGGYGSGAVTQTGYPQSSYPQAAYPQQGYPQASYPQQGYPQQGY
PQQGGYQQGYPADSGYGSTGADQYGVRYGWVESIEVVSGQAASTSGAGAVVGGIVGGLLGHQVGGGRGNTVATIGGAVAG
ALAGNEVEKRGSAVPPAYRVRVRTNDNAYLTVTQANPYQLRNGDRVRVENGVAVPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21951; Mature: 21820

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPFRSVVLAVLGAGALAGCVTAPYGGYAGGYSGGYSGGYGSGAVTQTGYPQSSYPQAA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
YPQQGYPQASYPQQGYPQQGYPQQGGYQQGYPADSGYGSTGADQYGVRYGWVESIEVVSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCC
QAASTSGAGAVVGGIVGGLLGHQVGGGRGNTVATIGGAVAGALAGNEVEKRGSAVPPAYR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCHHHHCCCCCCCEEE
VRVRTNDNAYLTVTQANPYQLRNGDRVRVENGVAVPY
EEEEECCCEEEEEECCCCEEECCCCEEEEECCCCCCC
>Mature Secondary Structure 
SIPFRSVVLAVLGAGALAGCVTAPYGGYAGGYSGGYSGGYGSGAVTQTGYPQSSYPQAA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
YPQQGYPQASYPQQGYPQQGYPQQGGYQQGYPADSGYGSTGADQYGVRYGWVESIEVVSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCC
QAASTSGAGAVVGGIVGGLLGHQVGGGRGNTVATIGGAVAGALAGNEVEKRGSAVPPAYR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCHHHHCCCCCCCEEE
VRVRTNDNAYLTVTQANPYQLRNGDRVRVENGVAVPY
EEEEECCCEEEEEECCCCEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA