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The map label for this gene is yhbQ [C]

Identifier: 73539380

GI number: 73539380

Start: 2376138

End: 2376410

Strand: Direct

Name: yhbQ [C]

Synonym: Reut_B5558

Alternate gene names: 73539380

Gene position: 2376138-2376410 (Clockwise)

Preceding gene: 73539375

Following gene: 73539383

Centisome position: 87.16

GC content: 58.24

Gene sequence:

>273_bases
ATGTCCGTTGAGCGCCAGTGGTATCTCTATCTGCTCGAATGCACGGGCGGTTCAATCTACACCGGCATTACTACCGATGT
GGCGCGACGCTTCGCGCAGCACCAAGCCGGAAAAGGTGCGAAGTACACCCGGTCGCGCAAGCCCTTGCGTGTGCTCGGCC
AGGTCGCCTTTCCCTCGAAGTCCGAAGCGCTGAAAGCCGAATTGGCGACGAAGCGTATGAGTTCGGCGCAGAAGATCGCA
TTTTGCGCGAAACTTGAGCAGCCCGAAACATGA

Upstream 100 bases:

>100_bases
GTGGCTGCGCGCGGACATTCCAATAATCCCGCGACACCCACTTTCGCGGCCGGCACTCACGCTTTAACATCCCCTGATCG
TTTTCAAGTGTCAGGATTGC

Downstream 100 bases:

>100_bases
AATGAAAAAGGCGCACGCCGCAGCGGGCGCCTTTCCTTTTCGATGCCGGTCTATCAGACGACCGTCAAGGTCACTTCGAT
ATTGCCGCGTGTCGCATTCG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSVERQWYLYLLECTGGSIYTGITTDVARRFAQHQAGKGAKYTRSRKPLRVLGQVAFPSKSEALKAELATKRMSSAQKIA
FCAKLEQPET

Sequences:

>Translated_90_residues
MSVERQWYLYLLECTGGSIYTGITTDVARRFAQHQAGKGAKYTRSRKPLRVLGQVAFPSKSEALKAELATKRMSSAQKIA
FCAKLEQPET
>Mature_89_residues
SVERQWYLYLLECTGGSIYTGITTDVARRFAQHQAGKGAKYTRSRKPLRVLGQVAFPSKSEALKAELATKRMSSAQKIAF
CAKLEQPET

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

Organism=Escherichia coli, GI1789545, Length=78, Percent_Identity=42.3076923076923, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5558_CUPPJ (Q46PN1)

Other databases:

- EMBL:   CP000091
- RefSeq:   YP_299747.1
- ProteinModelPortal:   Q46PN1
- SMR:   Q46PN1
- GeneID:   3612853
- GenomeReviews:   CP000091_GR
- KEGG:   reu:Reut_B5558
- NMPDR:   fig|264198.3.peg.4990
- HOGENOM:   HBG678874
- OMA:   KCKDESL
- ProtClustDB:   CLSK716363
- BioCyc:   REUT264198:REUT_B5558-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 10056; Mature: 9925

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVERQWYLYLLECTGGSIYTGITTDVARRFAQHQAGKGAKYTRSRKPLRVLGQVAFPSK
CCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
SEALKAELATKRMSSAQKIAFCAKLEQPET
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVERQWYLYLLECTGGSIYTGITTDVARRFAQHQAGKGAKYTRSRKPLRVLGQVAFPSK
CCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
SEALKAELATKRMSSAQKIAFCAKLEQPET
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA