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The map label for this gene is omp32 [H]

Identifier: 73539257

GI number: 73539257

Start: 2225023

End: 2226021

Strand: Direct

Name: omp32 [H]

Synonym: Reut_B5435

Alternate gene names: 73539257

Gene position: 2225023-2226021 (Clockwise)

Preceding gene: 73539256

Following gene: 73539259

Centisome position: 81.62

GC content: 66.57

Gene sequence:

>999_bases
ATGAAGTCTCAACGTAAGTTGCTGGCCGTCATGGCGGCCGCCGGCAGCCTTGCCGCGGGCGCGGCAAGCGCCCAGAGCAA
TGTGCAGTTGTACGGCACCGTCGACGCCTTCGTCGGCTCGGTACGCGCGAGTGGCGACGCCCACAGCACCGCCGCCGTGG
AAAGCTCCGGCCTGACCACGTCCTACTGGGGCATCGGCGGCCAGGAAGCGCTCGGCAATGGCCTCAACGCGGAGTTCGCG
CTGGAAAGCTTCTTCCGCACCGACAACGGCAAGGTCGGCCGCTTCGACGGCGATGCCATGTTCGGCCGTAATGCCTACGT
CGGCCTGAACGGCGGCTTCGGCGCCATCAAGCTCGGCCGCAACACCACGCCGTGGTTCGTGTCGATGCTGCTGTTCAACC
CGCTCGCGGATTCGGCCACGTTCTCGCCGATGTTCCTGCACACCTACACCACGCCGCCGGGTTCGCCCGTGGGTAACTCG
GTGGCCGGCGACACCGCCTGGGACAACTCGGTGCTGTACCAGAGCCCGGGCTTCGGCGGCCTGCGCTTCAATGCCATCTA
CTCGACCGGCGAGACCACCGGCCACCAGGGCAAGCAGAACTACGGCGGCAATGCCACGTACTTCAACGGCAACTTCGGTG
CGACGCTGGCCGTGCAGCGCGTGGCCGTGAACGCGCCCGAGTTCGCCGCGTCCGGCGCCAGCTACCAGATGGCTTACCTG
GCCGGCGCTTCGTACGACTTCAAGGTGGTGAAGCTGTTCGGCCAGTATGCGCAGTCGGACAACGACTTCAACGCGCAGAG
CCGCCAGCGCGACAAGACCGTGCAGGTCGGCGCCAGCGCTCCTCTGGGTCCCGGTTCGCTGATGGCCACCTGGGTTCGCA
CGTGGCAGGGCGGCAACGAGATCATCGGCTCGGCGCGTCGCGACACTACGCGCTGGCGTACGACTATCCGTTCTCCAAGC
GCACCGACATGTATGCCGCCTGGCGGTATGACAAGGTGA

Upstream 100 bases:

>100_bases
CAGAACGGCTCCGGTAGCCCGCTGCGCGTGCTCGCGCTGATTGGTGGCTGATTGTCAGACCCGTCAGACCCCATCCACCA
AAAGAGAGAAAGAGGAAACA

Downstream 100 bases:

>100_bases
GCACGCTGAACCCGGGCAACACCTTCGGCCTGGGGCTGCGCCACAAGTTCTGAGCGATGGCCTGCTATGCGGTGGGGCAG
GCTTACCTGTATTCGCGGGG

Product: porin transmembrane protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKSQRKLLAVMAAAGSLAAGAASAQSNVQLYGTVDAFVGSVRASGDAHSTAAVESSGLTTSYWGIGGQEALGNGLNAEFA
LESFFRTDNGKVGRFDGDAMFGRNAYVGLNGGFGAIKLGRNTTPWFVSMLLFNPLADSATFSPMFLHTYTTPPGSPVGNS
VAGDTAWDNSVLYQSPGFGGLRFNAIYSTGETTGHQGKQNYGGNATYFNGNFGATLAVQRVAVNAPEFAASGASYQMAYL
AGASYDFKVVKLFGQYAQSDNDFNAQSRQRDKTVQVGASAPLGPGSLMATWVRTWQGGNEIIGSARRDTTRWRTTIRSPS
APTCMPPGGMTR

Sequences:

>Translated_332_residues
MKSQRKLLAVMAAAGSLAAGAASAQSNVQLYGTVDAFVGSVRASGDAHSTAAVESSGLTTSYWGIGGQEALGNGLNAEFA
LESFFRTDNGKVGRFDGDAMFGRNAYVGLNGGFGAIKLGRNTTPWFVSMLLFNPLADSATFSPMFLHTYTTPPGSPVGNS
VAGDTAWDNSVLYQSPGFGGLRFNAIYSTGETTGHQGKQNYGGNATYFNGNFGATLAVQRVAVNAPEFAASGASYQMAYL
AGASYDFKVVKLFGQYAQSDNDFNAQSRQRDKTVQVGASAPLGPGSLMATWVRTWQGGNEIIGSARRDTTRWRTTIRSPS
APTCMPPGGMTR
>Mature_332_residues
MKSQRKLLAVMAAAGSLAAGAASAQSNVQLYGTVDAFVGSVRASGDAHSTAAVESSGLTTSYWGIGGQEALGNGLNAEFA
LESFFRTDNGKVGRFDGDAMFGRNAYVGLNGGFGAIKLGRNTTPWFVSMLLFNPLADSATFSPMFLHTYTTPPGSPVGNS
VAGDTAWDNSVLYQSPGFGGLRFNAIYSTGETTGHQGKQNYGGNATYFNGNFGATLAVQRVAVNAPEFAASGASYQMAYL
AGASYDFKVVKLFGQYAQSDNDFNAQSRQRDKTVQVGASAPLGPGSLMATWVRTWQGGNEIIGSARRDTTRWRTTIRSPS
APTCMPPGGMTR

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 34874; Mature: 34874

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQRKLLAVMAAAGSLAAGAASAQSNVQLYGTVDAFVGSVRASGDAHSTAAVESSGLTT
CCCHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHEECCCCCEE
SYWGIGGQEALGNGLNAEFALESFFRTDNGKVGRFDGDAMFGRNAYVGLNGGFGAIKLGR
EECCCCCHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCEEECCCEEEEECCCCEEEEECC
NTTPWFVSMLLFNPLADSATFSPMFLHTYTTPPGSPVGNSVAGDTAWDNSVLYQSPGFGG
CCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
LRFNAIYSTGETTGHQGKQNYGGNATYFNGNFGATLAVQRVAVNAPEFAASGASYQMAYL
EEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCHHHCCCCCEEEEEE
AGASYDFKVVKLFGQYAQSDNDFNAQSRQRDKTVQVGASAPLGPGSLMATWVRTWQGGNE
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCHH
IIGSARRDTTRWRTTIRSPSAPTCMPPGGMTR
HHCCCCCCCHHHHHEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSQRKLLAVMAAAGSLAAGAASAQSNVQLYGTVDAFVGSVRASGDAHSTAAVESSGLTT
CCCHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHEECCCCCEE
SYWGIGGQEALGNGLNAEFALESFFRTDNGKVGRFDGDAMFGRNAYVGLNGGFGAIKLGR
EECCCCCHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCEEECCCEEEEECCCCEEEEECC
NTTPWFVSMLLFNPLADSATFSPMFLHTYTTPPGSPVGNSVAGDTAWDNSVLYQSPGFGG
CCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
LRFNAIYSTGETTGHQGKQNYGGNATYFNGNFGATLAVQRVAVNAPEFAASGASYQMAYL
EEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCHHHCCCCCEEEEEE
AGASYDFKVVKLFGQYAQSDNDFNAQSRQRDKTVQVGASAPLGPGSLMATWVRTWQGGNE
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCHH
IIGSARRDTTRWRTTIRSPSAPTCMPPGGMTR
HHCCCCCCCHHHHHEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]