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The map label for this gene is ompW [C]

Identifier: 73539248

GI number: 73539248

Start: 2215815

End: 2216465

Strand: Reverse

Name: ompW [C]

Synonym: Reut_B5426

Alternate gene names: 73539248

Gene position: 2216465-2215815 (Counterclockwise)

Preceding gene: 73539250

Following gene: 73539246

Centisome position: 81.3

GC content: 62.98

Gene sequence:

>651_bases
ATGAACAAGCTCTCTCTCCTGACCCGGGTCGCCTGTACTGCCATCGCCGCGTTTGCCATGTTCGGCGCCGTCTCCACGCC
CGCCCTCGCCGCCGACGGCGAGACCCAGGGCAACTGGATGGTGCGCCTGCGCGCCACGTACCTCGACATGGCCGACAAGT
CCGATGCCATTCCCGCGCTGGGCGTGCCGTCGGATGCCATCACGGTCAACAACAAGTGGATTCCCGAGCTCGACGTCACC
TACTTCTTCACGCGCAATATCGCCGCGGAACTGGTGCTGACCGTGCCGCAGAAGCAGGACGTCTACCTGAACGGCAACCG
CATCGGCACCTTCAAGCACCTGCCACCCACGCTGCTCGTGCAGTACCACTTCCTGCCCGAAGGCACGATTCGTCCGTACG
TGGGCGCCGGCCTGAACTTCACGCGCATCTGGGGCGCCGACATCGCCAACAACACGCTGCAGCTCGACAACTGGAGCGTG
GCACCGGCGCTGCAGATCGGCATGGATTACAAGCTGACCAAGAACTGGTTCCTGAACGCCGACATCAAGAAGGTCTGGCT
CGGCAGCGACGTAAAGGCCGGCGGCGAGAAGATCTCGAAGGTCAATCTGGATCCGTGGCTGTTCAGCATGGGCGTGGGTT
ACCGGTTCTGA

Upstream 100 bases:

>100_bases
CCCTACACGCGATAGGGTTGGCCTTGTCCGCGGTCAATGTCGTGGCATAGCCGCTCGGCCAAACTGGCGGCGATTTACTA
CCAGACCAAAGCAAGAAACC

Downstream 100 bases:

>100_bases
TCGGGCTCGTCCGAGTCTGCGTGAAACGAAAAAAGCCAGCGCATGAGGCGCTGGCCTTTTTCATTGCGAAGCCGCTGTCC
GTACAGTGCGGCGGGAATCG

Product: OmpW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNKLSLLTRVACTAIAAFAMFGAVSTPALAADGETQGNWMVRLRATYLDMADKSDAIPALGVPSDAITVNNKWIPELDVT
YFFTRNIAAELVLTVPQKQDVYLNGNRIGTFKHLPPTLLVQYHFLPEGTIRPYVGAGLNFTRIWGADIANNTLQLDNWSV
APALQIGMDYKLTKNWFLNADIKKVWLGSDVKAGGEKISKVNLDPWLFSMGVGYRF

Sequences:

>Translated_216_residues
MNKLSLLTRVACTAIAAFAMFGAVSTPALAADGETQGNWMVRLRATYLDMADKSDAIPALGVPSDAITVNNKWIPELDVT
YFFTRNIAAELVLTVPQKQDVYLNGNRIGTFKHLPPTLLVQYHFLPEGTIRPYVGAGLNFTRIWGADIANNTLQLDNWSV
APALQIGMDYKLTKNWFLNADIKKVWLGSDVKAGGEKISKVNLDPWLFSMGVGYRF
>Mature_216_residues
MNKLSLLTRVACTAIAAFAMFGAVSTPALAADGETQGNWMVRLRATYLDMADKSDAIPALGVPSDAITVNNKWIPELDVT
YFFTRNIAAELVLTVPQKQDVYLNGNRIGTFKHLPPTLLVQYHFLPEGTIRPYVGAGLNFTRIWGADIANNTLQLDNWSV
APALQIGMDYKLTKNWFLNADIKKVWLGSDVKAGGEKISKVNLDPWLFSMGVGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=167, Percent_Identity=34.1317365269461, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 23885; Mature: 23885

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSLLTRVACTAIAAFAMFGAVSTPALAADGETQGNWMVRLRATYLDMADKSDAIPAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCC
GVPSDAITVNNKWIPELDVTYFFTRNIAAELVLTVPQKQDVYLNGNRIGTFKHLPPTLLV
CCCCCEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEECCCEEEEECCCCCEEEE
QYHFLPEGTIRPYVGAGLNFTRIWGADIANNTLQLDNWSVAPALQIGMDYKLTKNWFLNA
EEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEECCCEEEECCEEECC
DIKKVWLGSDVKAGGEKISKVNLDPWLFSMGVGYRF
CCEEEEECCCCCCCCCEEEEECCCHHEEECCCCCCC
>Mature Secondary Structure
MNKLSLLTRVACTAIAAFAMFGAVSTPALAADGETQGNWMVRLRATYLDMADKSDAIPAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCC
GVPSDAITVNNKWIPELDVTYFFTRNIAAELVLTVPQKQDVYLNGNRIGTFKHLPPTLLV
CCCCCEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEECCCEEEEECCCCCEEEE
QYHFLPEGTIRPYVGAGLNFTRIWGADIANNTLQLDNWSVAPALQIGMDYKLTKNWFLNA
EEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEECCCEEEECCEEECC
DIKKVWLGSDVKAGGEKISKVNLDPWLFSMGVGYRF
CCEEEEECCCCCCCCCEEEEECCCHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]