Click here to switch to the map view.

The map label for this gene is cc4 [H]

Identifier: 73539240

GI number: 73539240

Start: 2205858

End: 2206460

Strand: Reverse

Name: cc4 [H]

Synonym: Reut_B5418

Alternate gene names: 73539240

Gene position: 2206460-2205858 (Counterclockwise)

Preceding gene: 73539241

Following gene: 73539225

Centisome position: 80.94

GC content: 66.0

Gene sequence:

>603_bases
ATGGCAGGCGTCAGCCCGGTTCCAGCGCGGCGCCTGCCCGCGCTGATGCTGTTGCTATCCCTCTGCGGCGTGGCCGGCCA
GGCCATCGCCGATGCCGCGGCCGGACAGGCCAAGGCGCAGGTGTGCGTGGCCTGCCACGGGCCGCAGGGCAACTCGACCA
ATCCGGCCTATCCGGAACTGGCGGGCCAGACCGCGCGCTATCTTTACCTGCAGCTGCGCGATTTCAAGGAAGGCCGCCGC
AGCGACCCGGCCATGTCGCCAATGGCCGCACCGCTATCGCGCGAAGACATGCAGGACCTGGCCGATTACTTCGCCGCGCA
GAAGCCGATACCGTCCACCTACAAGGTCGAGGCCGCACGCGTCGAAGCGGGGCGCAAGAAGTCCGAGGAAATCCTGTGCA
CGATGTGCCACCTTGGCGGCTTCTCGGGCCAGAACGAGATCCCGCGCGTGGCGGGACAGCAGTACGCCTATATCGTGAAG
CAGCTCGAAGACTTCCGGGCCAAGCGCCGCACCAACGATGCGGGCAACATGACCAGCGTCTCGCGCAACCTGAGCGACGA
GGATATCCGCAACCTGGCGAGCTACATCACGAACCTTAACTAG

Upstream 100 bases:

>100_bases
ATCGCCGTGGCAGCGGGCGGCAATACGCAGCTCGACTTCAAGCGCGGTAACAGCGTGTTCGTCTTTGCCGTGCAATAACG
CGATCATCGACGGGGGCACC

Downstream 100 bases:

>100_bases
CGTCCTGGTCTTTACGCCGGTTCAGCCTCGCTGTCGGCAATCTGATACTTGCGCATCTTCTCCCACAGCACCTTGCGGCT
AATGCCCAGGCTGGCAGCCG

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MAGVSPVPARRLPALMLLLSLCGVAGQAIADAAAGQAKAQVCVACHGPQGNSTNPAYPELAGQTARYLYLQLRDFKEGRR
SDPAMSPMAAPLSREDMQDLADYFAAQKPIPSTYKVEAARVEAGRKKSEEILCTMCHLGGFSGQNEIPRVAGQQYAYIVK
QLEDFRAKRRTNDAGNMTSVSRNLSDEDIRNLASYITNLN

Sequences:

>Translated_200_residues
MAGVSPVPARRLPALMLLLSLCGVAGQAIADAAAGQAKAQVCVACHGPQGNSTNPAYPELAGQTARYLYLQLRDFKEGRR
SDPAMSPMAAPLSREDMQDLADYFAAQKPIPSTYKVEAARVEAGRKKSEEILCTMCHLGGFSGQNEIPRVAGQQYAYIVK
QLEDFRAKRRTNDAGNMTSVSRNLSDEDIRNLASYITNLN
>Mature_199_residues
AGVSPVPARRLPALMLLLSLCGVAGQAIADAAAGQAKAQVCVACHGPQGNSTNPAYPELAGQTARYLYLQLRDFKEGRRS
DPAMSPMAAPLSREDMQDLADYFAAQKPIPSTYKVEAARVEAGRKKSEEILCTMCHLGGFSGQNEIPRVAGQQYAYIVKQ
LEDFRAKRRTNDAGNMTSVSRNLSDEDIRNLASYITNLN

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21681; Mature: 21550

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVSPVPARRLPALMLLLSLCGVAGQAIADAAAGQAKAQVCVACHGPQGNSTNPAYPEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHH
AGQTARYLYLQLRDFKEGRRSDPAMSPMAAPLSREDMQDLADYFAAQKPIPSTYKVEAAR
HCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
VEAGRKKSEEILCTMCHLGGFSGQNEIPRVAGQQYAYIVKQLEDFRAKRRTNDAGNMTSV
HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SRNLSDEDIRNLASYITNLN
HHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGVSPVPARRLPALMLLLSLCGVAGQAIADAAAGQAKAQVCVACHGPQGNSTNPAYPEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHH
AGQTARYLYLQLRDFKEGRRSDPAMSPMAAPLSREDMQDLADYFAAQKPIPSTYKVEAAR
HCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
VEAGRKKSEEILCTMCHLGGFSGQNEIPRVAGQQYAYIVKQLEDFRAKRRTNDAGNMTSV
HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SRNLSDEDIRNLASYITNLN
HHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]