Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is 73539230
Identifier: 73539230
GI number: 73539230
Start: 2194557
End: 2195513
Strand: Direct
Name: 73539230
Synonym: Reut_B5408
Alternate gene names: NA
Gene position: 2194557-2195513 (Clockwise)
Preceding gene: 73539229
Following gene: 73539231
Centisome position: 80.5
GC content: 68.55
Gene sequence:
>957_bases ATGACCAGTAAGCAGATACGGATTGTCGCCATTGCCCTGCTCAGCGTGGCGCTGCTGCTCGCGCTGCTGGCCTGGCAGGT GGGACGCCAGCCAGAACCCCCACCGGTGTCCCGGGCCGCGGCGGCGGTTCCGCATCCGGTGGTCGTGACGGCGCGTGCGG TGGAAGCGGGCAAGCCCCTGCCTGCCGACGCGCTGAAGGTCGAAATGCTGCCGATCGAGCCCACGGGCGCCTATGCCGAG GTGACACGCGTGGCAGGACAGGTGCCGCTGGTCAATATCGGCGCGAACGTCCCGGTTCTCGAAAGCCAGCTGCTCGCGGG ACTGGCCGCGCAGATCCCCGAAGGCGAGCGCGCGGTGGCGATCGCCGTGGACGAAGTGATTGGCGTCGGCAACCAGGTAC AGCCGGGGGACTATGTCGACGTATTTCTGGTCCTGCGGCGCGACAGCCAGGAGATCGGCGCCAGCCAGGCCCGCATGCTG CTGCCCAGGCTGCGCGTGCTTGCCTACGGCAGCGGCGCAGTCAACGAACCGCAAAAGCAGCAGCCTGAACAGATGATGAC GCGCCGCGAAGGCGCCAAGACCGCCGTGCTGTCCGTACCGTTGGAACAGGTCAGCAAGCTGGCCATGGCTCAGCACTCCG GCCGCCTGCTGATGGCGCTGCGCAATCCGCACGATGAACTCATTCCCAGCGACGGCATGTTCTCCGAGCCTCCGCCAGCG CTGGCCGTGCGCGCTGGCGTGCCGGCCGACGCACCAAGCGCCGCAGCCGACAAGGCAGTGGCCGGCGTGATGCTGGCGGG CATGGCGGCTGGCAGCACACCATCGGCACGTGCGCCGAACACGGCGGCACCGCAAGTCAGGCCGCAGAGTGTGGCGCCTG TAGCGGGACAGGGCCGGCCGGAACGGCAGCTTGCGGGTGTGGAAGTGATTCGCGCAGGCAAGCGCGAGATCGAATAG
Upstream 100 bases:
>100_bases GAACAGGCTCGCATCCGCCACATGTGCCGAGCTTTCCAAGGTATTCGCGTCTTGACGTCCGCGCATCGATCGTCAGCCCA TCAGCCGGGAGAAGCCGACC
Downstream 100 bases:
>100_bases CGAGACGCTCATGATCCGTCGAAGCGTAGGCGCCATCCTGCTCCCTGACTCCATGATTCGCGATGCCATGATGAAGACGC TGCTTGCAGCCATGCTTGCC
Product: Flp pilus assembly CpaB
Products: NA
Alternate protein names: Flp Pilus Assembly CpaB; Flp Pilus Assembly Protein; SAF Domain-Containing Protein; CpaB Family Flp Pilus Assembly Protein; Pilus Assembly Protein; Flp Pilus Assembly; Pilus Assembly Protein Cpab; Flp Type Pilus Assembly Protein; Flp Pilus Assembly Protein RcpC/CpaB; Signal Peptide Protein CpaB Like Protein; CpaB Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Signal Peptide Protein; Pilus Assembly Protein CpaB; Signal Peptide Protein CpaB Like; Flp Pilus Assembly Protein CpaB-Like Protein; Transmembrane Fimbriae Assembly Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTSKQIRIVAIALLSVALLLALLAWQVGRQPEPPPVSRAAAAVPHPVVVTARAVEAGKPLPADALKVEMLPIEPTGAYAE VTRVAGQVPLVNIGANVPVLESQLLAGLAAQIPEGERAVAIAVDEVIGVGNQVQPGDYVDVFLVLRRDSQEIGASQARML LPRLRVLAYGSGAVNEPQKQQPEQMMTRREGAKTAVLSVPLEQVSKLAMAQHSGRLLMALRNPHDELIPSDGMFSEPPPA LAVRAGVPADAPSAAADKAVAGVMLAGMAAGSTPSARAPNTAAPQVRPQSVAPVAGQGRPERQLAGVEVIRAGKREIE
Sequences:
>Translated_318_residues MTSKQIRIVAIALLSVALLLALLAWQVGRQPEPPPVSRAAAAVPHPVVVTARAVEAGKPLPADALKVEMLPIEPTGAYAE VTRVAGQVPLVNIGANVPVLESQLLAGLAAQIPEGERAVAIAVDEVIGVGNQVQPGDYVDVFLVLRRDSQEIGASQARML LPRLRVLAYGSGAVNEPQKQQPEQMMTRREGAKTAVLSVPLEQVSKLAMAQHSGRLLMALRNPHDELIPSDGMFSEPPPA LAVRAGVPADAPSAAADKAVAGVMLAGMAAGSTPSARAPNTAAPQVRPQSVAPVAGQGRPERQLAGVEVIRAGKREIE >Mature_317_residues TSKQIRIVAIALLSVALLLALLAWQVGRQPEPPPVSRAAAAVPHPVVVTARAVEAGKPLPADALKVEMLPIEPTGAYAEV TRVAGQVPLVNIGANVPVLESQLLAGLAAQIPEGERAVAIAVDEVIGVGNQVQPGDYVDVFLVLRRDSQEIGASQARMLL PRLRVLAYGSGAVNEPQKQQPEQMMTRREGAKTAVLSVPLEQVSKLAMAQHSGRLLMALRNPHDELIPSDGMFSEPPPAL AVRAGVPADAPSAAADKAVAGVMLAGMAAGSTPSARAPNTAAPQVRPQSVAPVAGQGRPERQLAGVEVIRAGKREIE
Specific function: Unknown
COG id: COG3745
COG function: function code U; Flp pilus assembly protein CpaB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33092; Mature: 32961
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKQIRIVAIALLSVALLLALLAWQVGRQPEPPPVSRAAAAVPHPVVVTARAVEAGKPL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEHHHCCCCC PADALKVEMLPIEPTGAYAEVTRVAGQVPLVNIGANVPVLESQLLAGLAAQIPEGERAVA CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEE IAVDEVIGVGNQVQPGDYVDVFLVLRRDSQEIGASQARMLLPRLRVLAYGSGAVNEPQKQ EEEHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHC QPEQMMTRREGAKTAVLSVPLEQVSKLAMAQHSGRLLMALRNPHDELIPSDGMFSEPPPA CHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCC LAVRAGVPADAPSAAADKAVAGVMLAGMAAGSTPSARAPNTAAPQVRPQSVAPVAGQGRP EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERQLAGVEVIRAGKREIE HHHHHHHHHHHCCHHCCC >Mature Secondary Structure TSKQIRIVAIALLSVALLLALLAWQVGRQPEPPPVSRAAAAVPHPVVVTARAVEAGKPL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEHHHCCCCC PADALKVEMLPIEPTGAYAEVTRVAGQVPLVNIGANVPVLESQLLAGLAAQIPEGERAVA CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEE IAVDEVIGVGNQVQPGDYVDVFLVLRRDSQEIGASQARMLLPRLRVLAYGSGAVNEPQKQ EEEHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHC QPEQMMTRREGAKTAVLSVPLEQVSKLAMAQHSGRLLMALRNPHDELIPSDGMFSEPPPA CHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCC LAVRAGVPADAPSAAADKAVAGVMLAGMAAGSTPSARAPNTAAPQVRPQSVAPVAGQGRP EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERQLAGVEVIRAGKREIE HHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA