Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is 73539179
Identifier: 73539179
GI number: 73539179
Start: 2132620
End: 2134566
Strand: Direct
Name: 73539179
Synonym: Reut_B5357
Alternate gene names: NA
Gene position: 2132620-2134566 (Clockwise)
Preceding gene: 73539178
Following gene: 73539180
Centisome position: 78.23
GC content: 68.93
Gene sequence:
>1947_bases ATGCGCGTGTCGGGACGCTGGCGCGACTCGGCGCCAGTGGCCGTGCATCGCCACGACTACTGGTACCGCCTGCGTTTCGC CGCGACTGGCCGTCGGGTCCTGCGCCTGCGCGGGCTGGCCGGCACTGCGCAGGCATGGCTGAATGGCCGCGAGATTTCCG CTCCGCAAGCGCCGGGCGATGCCTGCGATGCCGAGGTCGAACTGGCAGGCCTTAACACGTTGCACCTGTGCTTTCGCGCG ACCGTGCCGCGGCTGCATGGCGCGCGCGCCACGCTGTTCTGGCGCCAGTCCGGTGCGTTCCCGATGTCCGGTGTGATCGG ACATGCGGCGGCAGAGGGGAAGCCTTTGCATGCCGTCGGCGTGCTGCAGCCGGTCGAAGTGCTTGACGTCGCCGGTGGCG ATGTCCTTGCCGATGCTGCCATGGACCTTTCCGCCGGACTGGAAGACGGCGACGGCGTGGTCCGCATGCGCCTGCACCTG CATGGCGAGGCACCGTTGCGGGCAACCCTGAACGTCGGCAATGCGCGACGCGCAGTCCAGGCGTCACTCACGCGCGAAGA TGCCTTCACGCTGACGGCGCAGGTGCGTCTTGCGCATCCCGATCCATGGTGGCCGCATACCCACGGCCGGCCCGCCCGCT ATCGCATCGTGGCCGAGGCTGGCGCGCATGCACTCGACTGCGGGCAAATCGGTTTGCGCAGCGTCCGGCGCGACAGGCAG GGACACATGCCGTACCCCCGCATCAATGACGTGCCCGTGTTTTGCCGCGGCGCGCGACTGGCCGCCGAGGAACTGGCCGC ACTGGCAGCATCGCCGCTGGCCACGCGGCGCTGGATGCGGCTCGCGCGCGGCGCGGGCCTGAACGTGCTGTATCTCGATC GCGATGGCGCGCCTGCCGCGGATATTCGAGCTGCGTGCGAGGCCGCCGGCATGCTGCTCTGGCGCGACGGCATGGCTCCG GCAGACACCGCATGGCTGCCCGAGATCGCTGGCGTGCCGTGCGCGCGTACGCTTGAAGCGCTCGGCCTGTCGCACGCCGT GGCCGATCCGAGCTGGAAGGCCAGCGTGCCGCATCCGGTCGGCACGCTATGGGATGCCGAGGATGCGCGCGACCGCCAGC TGCGCACGCTGTATGACGTGGATCCCCCGCATCTGCGCCGGACCGATGCGCAGCGCTACCTGCGCCTGTCGCGCGCGCTC GCTGCCGATCTCGTGAATGATCTCATCGCCGGTTGCCGTCGCGACGGCAGTAGCGCGGGACTGGCGCTGGCGCCATCGCT GCACGATGTGCTGCTGGCCAACGGCACAGGCCTGGTTGATGTGTGCGGCCGCCCGAAATCCGGCTGGCATGCCATGCGTG CGGCATGCCGTCCGTTGCAGGTGCTGATCAGTAACAACGGCAGCAACGGCAGCGACAGCATCCGGCTGGACTTGTGCAAT GAAACAGCCGCGCCGCGTGAGGTCCGCGTGCGGGTTTGCTGGATCCGGAACGGCGCACAGGTACACGCCGAGGCCGACCA TGTGCTTTGCCTGCAAGCGCGCGCTGTGCTTGTGCTGGCGCCGCAGCCACAACAGGGCGGAGCGGCGGCAGCGGCAGATG TCGTGCTGGCCACGCTGTCGGACGCTCGCAGTGGCGAGCTGCTCAGCCAGGCCGCGCACCTGCCCGATCGCCGCGCCGAC GCGTTGCCGCAAGCCGGCCTGCACGTCGAAGTGCAGCGGTATGCGGAGCAGTGGTGGCTTGAGATATCGGCCACGCATTT TGCGCGCTGGGTGCATATCGAAGACGACGTGCTTCAGCCGTCGCAGGACTGGTTTCACCTTGCACCGGGCGGACGCATCC GCATCCGTCTTTTGCATGAAGGCGGGCATGCCCTTCATCCTGCCATGTGCCCCGCTGGAAAGGTCCGCGCACTCAACCAG GACGCGCCCGTCCACTACGGGGCGTAG
Upstream 100 bases:
>100_bases CGCGGCGACAAGCGCGTGCCAGGCGGCTGGCGCGTGTCGGGCGACTGGTCGTGGTTGGAGACCCTGCCCGGCGCCGGTGC CGGGCACAGTGGCCGACGCG
Downstream 100 bases:
>100_bases CGTTTTCCGCTTCTGTTCCTGCCCAAAGGCCACCCCCCGCGTGCGTGCGGCAAGCATGTCCGCTATCCGGCCAACCTACC AATGGATGACGGGGCACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Mannosidase Protein; Mannosidase; Glycosidase; Glycoside Hydrolase Family Protein; Exported Glycosyl Hydrolase; O-Glycosyl Hydrolase; Beta-Mannosidase-Related Protein
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MRVSGRWRDSAPVAVHRHDYWYRLRFAATGRRVLRLRGLAGTAQAWLNGREISAPQAPGDACDAEVELAGLNTLHLCFRA TVPRLHGARATLFWRQSGAFPMSGVIGHAAAEGKPLHAVGVLQPVEVLDVAGGDVLADAAMDLSAGLEDGDGVVRMRLHL HGEAPLRATLNVGNARRAVQASLTREDAFTLTAQVRLAHPDPWWPHTHGRPARYRIVAEAGAHALDCGQIGLRSVRRDRQ GHMPYPRINDVPVFCRGARLAAEELAALAASPLATRRWMRLARGAGLNVLYLDRDGAPAADIRAACEAAGMLLWRDGMAP ADTAWLPEIAGVPCARTLEALGLSHAVADPSWKASVPHPVGTLWDAEDARDRQLRTLYDVDPPHLRRTDAQRYLRLSRAL AADLVNDLIAGCRRDGSSAGLALAPSLHDVLLANGTGLVDVCGRPKSGWHAMRAACRPLQVLISNNGSNGSDSIRLDLCN ETAAPREVRVRVCWIRNGAQVHAEADHVLCLQARAVLVLAPQPQQGGAAAAADVVLATLSDARSGELLSQAAHLPDRRAD ALPQAGLHVEVQRYAEQWWLEISATHFARWVHIEDDVLQPSQDWFHLAPGGRIRIRLLHEGGHALHPAMCPAGKVRALNQ DAPVHYGA
Sequences:
>Translated_648_residues MRVSGRWRDSAPVAVHRHDYWYRLRFAATGRRVLRLRGLAGTAQAWLNGREISAPQAPGDACDAEVELAGLNTLHLCFRA TVPRLHGARATLFWRQSGAFPMSGVIGHAAAEGKPLHAVGVLQPVEVLDVAGGDVLADAAMDLSAGLEDGDGVVRMRLHL HGEAPLRATLNVGNARRAVQASLTREDAFTLTAQVRLAHPDPWWPHTHGRPARYRIVAEAGAHALDCGQIGLRSVRRDRQ GHMPYPRINDVPVFCRGARLAAEELAALAASPLATRRWMRLARGAGLNVLYLDRDGAPAADIRAACEAAGMLLWRDGMAP ADTAWLPEIAGVPCARTLEALGLSHAVADPSWKASVPHPVGTLWDAEDARDRQLRTLYDVDPPHLRRTDAQRYLRLSRAL AADLVNDLIAGCRRDGSSAGLALAPSLHDVLLANGTGLVDVCGRPKSGWHAMRAACRPLQVLISNNGSNGSDSIRLDLCN ETAAPREVRVRVCWIRNGAQVHAEADHVLCLQARAVLVLAPQPQQGGAAAAADVVLATLSDARSGELLSQAAHLPDRRAD ALPQAGLHVEVQRYAEQWWLEISATHFARWVHIEDDVLQPSQDWFHLAPGGRIRIRLLHEGGHALHPAMCPAGKVRALNQ DAPVHYGA >Mature_648_residues MRVSGRWRDSAPVAVHRHDYWYRLRFAATGRRVLRLRGLAGTAQAWLNGREISAPQAPGDACDAEVELAGLNTLHLCFRA TVPRLHGARATLFWRQSGAFPMSGVIGHAAAEGKPLHAVGVLQPVEVLDVAGGDVLADAAMDLSAGLEDGDGVVRMRLHL HGEAPLRATLNVGNARRAVQASLTREDAFTLTAQVRLAHPDPWWPHTHGRPARYRIVAEAGAHALDCGQIGLRSVRRDRQ GHMPYPRINDVPVFCRGARLAAEELAALAASPLATRRWMRLARGAGLNVLYLDRDGAPAADIRAACEAAGMLLWRDGMAP ADTAWLPEIAGVPCARTLEALGLSHAVADPSWKASVPHPVGTLWDAEDARDRQLRTLYDVDPPHLRRTDAQRYLRLSRAL AADLVNDLIAGCRRDGSSAGLALAPSLHDVLLANGTGLVDVCGRPKSGWHAMRAACRPLQVLISNNGSNGSDSIRLDLCN ETAAPREVRVRVCWIRNGAQVHAEADHVLCLQARAVLVLAPQPQQGGAAAAADVVLATLSDARSGELLSQAAHLPDRRAD ALPQAGLHVEVQRYAEQWWLEISATHFARWVHIEDDVLQPSQDWFHLAPGGRIRIRLLHEGGHALHPAMCPAGKVRALNQ DAPVHYGA
Specific function: Unknown
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70089; Mature: 70089
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSGRWRDSAPVAVHRHDYWYRLRFAATGRRVLRLRGLAGTAQAWLNGREISAPQAPGD CCCCCCCCCCCCEEEEECCEEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCC ACDAEVELAGLNTLHLCFRATVPRLHGARATLFWRQSGAFPMSGVIGHAAAEGKPLHAVG CCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEE VLQPVEVLDVAGGDVLADAAMDLSAGLEDGDGVVRMRLHLHGEAPLRATLNVGNARRAVQ CCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHH ASLTREDAFTLTAQVRLAHPDPWWPHTHGRPARYRIVAEAGAHALDCGQIGLRSVRRDRQ HHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHHHHHHHHHHC GHMPYPRINDVPVFCRGARLAAEELAALAASPLATRRWMRLARGAGLNVLYLDRDGAPAA CCCCCCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCHH DIRAACEAAGMLLWRDGMAPADTAWLPEIAGVPCARTLEALGLSHAVADPSWKASVPHPV HHHHHHHHCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCC GTLWDAEDARDRQLRTLYDVDPPHLRRTDAQRYLRLSRALAADLVNDLIAGCRRDGSSAG CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LALAPSLHDVLLANGTGLVDVCGRPKSGWHAMRAACRPLQVLISNNGSNGSDSIRLDLCN EEECCCHHHEEEECCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEECC ETAAPREVRVRVCWIRNGAQVHAEADHVLCLQARAVLVLAPQPQQGGAAAAADVVLATLS CCCCCCEEEEEEEEEECCCEEEECCCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHHHC DARSGELLSQAAHLPDRRADALPQAGLHVEVQRYAEQWWLEISATHFARWVHIEDDVLQP CCCCCHHHHHHHCCCCCHHHCCCCCCCEEHHHHHHHHHEEEEEEEEEEEEEEECCCCCCC SQDWFHLAPGGRIRIRLLHEGGHALHPAMCPAGKVRALNQDAPVHYGA CCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MRVSGRWRDSAPVAVHRHDYWYRLRFAATGRRVLRLRGLAGTAQAWLNGREISAPQAPGD CCCCCCCCCCCCEEEEECCEEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCC ACDAEVELAGLNTLHLCFRATVPRLHGARATLFWRQSGAFPMSGVIGHAAAEGKPLHAVG CCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEE VLQPVEVLDVAGGDVLADAAMDLSAGLEDGDGVVRMRLHLHGEAPLRATLNVGNARRAVQ CCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHH ASLTREDAFTLTAQVRLAHPDPWWPHTHGRPARYRIVAEAGAHALDCGQIGLRSVRRDRQ HHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHHHHHHHHHHC GHMPYPRINDVPVFCRGARLAAEELAALAASPLATRRWMRLARGAGLNVLYLDRDGAPAA CCCCCCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCHH DIRAACEAAGMLLWRDGMAPADTAWLPEIAGVPCARTLEALGLSHAVADPSWKASVPHPV HHHHHHHHCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCC GTLWDAEDARDRQLRTLYDVDPPHLRRTDAQRYLRLSRALAADLVNDLIAGCRRDGSSAG CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LALAPSLHDVLLANGTGLVDVCGRPKSGWHAMRAACRPLQVLISNNGSNGSDSIRLDLCN EEECCCHHHEEEECCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEECC ETAAPREVRVRVCWIRNGAQVHAEADHVLCLQARAVLVLAPQPQQGGAAAAADVVLATLS CCCCCCEEEEEEEEEECCCEEEECCCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHHHC DARSGELLSQAAHLPDRRADALPQAGLHVEVQRYAEQWWLEISATHFARWVHIEDDVLQP CCCCCHHHHHHHCCCCCHHHCCCCCCCEEHHHHHHHHHEEEEEEEEEEEEEEECCCCCCC SQDWFHLAPGGRIRIRLLHEGGHALHPAMCPAGKVRALNQDAPVHYGA CCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA