| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is 73539087
Identifier: 73539087
GI number: 73539087
Start: 2014825
End: 2016171
Strand: Reverse
Name: 73539087
Synonym: Reut_B5264
Alternate gene names: NA
Gene position: 2016171-2014825 (Counterclockwise)
Preceding gene: 73539088
Following gene: 73539086
Centisome position: 73.96
GC content: 63.85
Gene sequence:
>1347_bases ATGAAGATAACGAGACCGCTGTGGGCACAAGGCATTTTCATGACTCCACAGCATTTTCAGCAGCAAGCGCTGTGGGAGCG CCATACCGACGAGCTGGTTGCGCGCATTGCGTGTCCCGAGCCGTGGGGCACCGTTCGTGTCGCACTCGACCCGCAAGCGC TATCCATCCACCGACTGGCCGTCAGTGCCTTGACTGTGCGCCTGCCCGACGGAACGGTGATTGACACGGAAACCGCGGAC CGCCCGCCACCGGCACGCGATCTCGCCGATGTGCCGGCTAGTGTCGATGCGGCAGTCGTACTGGTCGGCCTGCCACTGGT GGACGCCCAGGGTGGCAACTGCATGGAGGACGGCGAGCGTCCCGCCCGGCCGCGACGCTTCGTGCGCGAGTATCTGTCAG TGGCCGATCTGCATGGCGAAGGCAAGGAAGAGATTAGCGTCGAGCGGCACGCGCTCGCACTGCTCTTCGAATTCGAGGCC CACGGCGACTATGTGACCTGCCCGATCGCCCGGCTGATCCGCACGCCGCAAGGGCGATTTGAACTCGACCCGACATTCGT GCCGCCGTGCTTGCTTGTCGCTGCGAGCGATAGGCTTACCGAGCGGATGAAGCGGCTCTCGGAGATCCTTGCCGCCAAGA GTGCGAGCCTGGCCGTGCGCCGAAGGGAGCGCTCGGACCAGATTGCCGACTTCGCCGTGGCAGATGTGGCGCTCTTCTGG CTGCTGCATAGCGTCAACAGCAATTGGCCGGAGCTGGCCCGCCTGTGTGCAGCACCGCGGCAACATCCGGAACGACTCTA TGGCGTGCTGTCCCGCCTGGCCGGGGCGCTGCTGACTTTCTCGACCACCGAGACATTACAGGCCATTCCCGCTTACAACC ACTTGGCGCCAGAACCGGTGTTCGCGGAACTGGAATCGCTAATCCGCACGCTGCTCGACACAGTCATCCCGTCGCGGGTG GTTCCCGTTGCGCTGGAACGAACAAGGCCCACGGCCTGGGTTGGCAAGATCCTCGACGAACGGCTGGTGGAAGGCGCCGA GTACTACTTGTCCGTCCAGGCAGGCTTGCCCGCTCACACACTGCTCGAACAGCTGCCGCGCCTGTGCAAGGCAGGTGCGC CAGACGAAGTCGAACAGATCGTCAACTCAGCGCTGCCGGGTATTCCCTTGCGCACCATGTCCCGCCTTCCCGCAGCGATT CCGGTCCGTGTCGAGAATCAGTACTTCGCACTGGATAGCGCGCATCCGGCCTTCCAGCGCATGCTGGCCGCGCGCGCGTG CCAGTTCTATGTTCCGGCCTCCGTGCCGGACGTATCGCTTGAACTTTTTGCGGTATTGCCGGCATGA
Upstream 100 bases:
>100_bases TCGCCAGCACCGCTGCGCATTGCGTGGAGGAAAGTCCTCCATGCAATGCGCAGCCTCAGCCACGATGACGCGCCTCAGAC TGCGCGGCGATTGATCACAC
Downstream 100 bases:
>100_bases CGACGCTTACTACCATTCTGCCTCTCGCCTTGCGCGACACGGCCTTGACCGTTACGGAACTTGCCGGGGAAGCCAAGCCG GAGACTTTCGAGACCTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKITRPLWAQGIFMTPQHFQQQALWERHTDELVARIACPEPWGTVRVALDPQALSIHRLAVSALTVRLPDGTVIDTETAD RPPPARDLADVPASVDAAVVLVGLPLVDAQGGNCMEDGERPARPRRFVREYLSVADLHGEGKEEISVERHALALLFEFEA HGDYVTCPIARLIRTPQGRFELDPTFVPPCLLVAASDRLTERMKRLSEILAAKSASLAVRRRERSDQIADFAVADVALFW LLHSVNSNWPELARLCAAPRQHPERLYGVLSRLAGALLTFSTTETLQAIPAYNHLAPEPVFAELESLIRTLLDTVIPSRV VPVALERTRPTAWVGKILDERLVEGAEYYLSVQAGLPAHTLLEQLPRLCKAGAPDEVEQIVNSALPGIPLRTMSRLPAAI PVRVENQYFALDSAHPAFQRMLAARACQFYVPASVPDVSLELFAVLPA
Sequences:
>Translated_448_residues MKITRPLWAQGIFMTPQHFQQQALWERHTDELVARIACPEPWGTVRVALDPQALSIHRLAVSALTVRLPDGTVIDTETAD RPPPARDLADVPASVDAAVVLVGLPLVDAQGGNCMEDGERPARPRRFVREYLSVADLHGEGKEEISVERHALALLFEFEA HGDYVTCPIARLIRTPQGRFELDPTFVPPCLLVAASDRLTERMKRLSEILAAKSASLAVRRRERSDQIADFAVADVALFW LLHSVNSNWPELARLCAAPRQHPERLYGVLSRLAGALLTFSTTETLQAIPAYNHLAPEPVFAELESLIRTLLDTVIPSRV VPVALERTRPTAWVGKILDERLVEGAEYYLSVQAGLPAHTLLEQLPRLCKAGAPDEVEQIVNSALPGIPLRTMSRLPAAI PVRVENQYFALDSAHPAFQRMLAARACQFYVPASVPDVSLELFAVLPA >Mature_448_residues MKITRPLWAQGIFMTPQHFQQQALWERHTDELVARIACPEPWGTVRVALDPQALSIHRLAVSALTVRLPDGTVIDTETAD RPPPARDLADVPASVDAAVVLVGLPLVDAQGGNCMEDGERPARPRRFVREYLSVADLHGEGKEEISVERHALALLFEFEA HGDYVTCPIARLIRTPQGRFELDPTFVPPCLLVAASDRLTERMKRLSEILAAKSASLAVRRRERSDQIADFAVADVALFW LLHSVNSNWPELARLCAAPRQHPERLYGVLSRLAGALLTFSTTETLQAIPAYNHLAPEPVFAELESLIRTLLDTVIPSRV VPVALERTRPTAWVGKILDERLVEGAEYYLSVQAGLPAHTLLEQLPRLCKAGAPDEVEQIVNSALPGIPLRTMSRLPAAI PVRVENQYFALDSAHPAFQRMLAARACQFYVPASVPDVSLELFAVLPA
Specific function: Unknown
COG id: COG3522
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49458; Mature: 49458
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITRPLWAQGIFMTPQHFQQQALWERHTDELVARIACPEPWGTVRVALDPQALSIHRLA CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH VSALTVRLPDGTVIDTETADRPPPARDLADVPASVDAAVVLVGLPLVDAQGGNCMEDGER HHHHEEECCCCCEEECCCCCCCCCCHHHHHCCCCCCCEEHEEECCEEECCCCCCCCCCCC PARPRRFVREYLSVADLHGEGKEEISVERHALALLFEFEAHGDYVTCPIARLIRTPQGRF CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEECCCCEEECHHHHHHCCCCCCE ELDPTFVPPCLLVAASDRLTERMKRLSEILAAKSASLAVRRRERSDQIADFAVADVALFW ECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHSVNSNWPELARLCAAPRQHPERLYGVLSRLAGALLTFSTTETLQAIPAYNHLAPEPV HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHH FAELESLIRTLLDTVIPSRVVPVALERTRPTAWVGKILDERLVEGAEYYLSVQAGLPAHT HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEECCCCHHH LLEQLPRLCKAGAPDEVEQIVNSALPGIPLRTMSRLPAAIPVRVENQYFALDSAHPAFQR HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCEEEECCCCHHHHH MLAARACQFYVPASVPDVSLELFAVLPA HHHHHHHHEECCCCCCCCCEEEEEECCC >Mature Secondary Structure MKITRPLWAQGIFMTPQHFQQQALWERHTDELVARIACPEPWGTVRVALDPQALSIHRLA CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH VSALTVRLPDGTVIDTETADRPPPARDLADVPASVDAAVVLVGLPLVDAQGGNCMEDGER HHHHEEECCCCCEEECCCCCCCCCCHHHHHCCCCCCCEEHEEECCEEECCCCCCCCCCCC PARPRRFVREYLSVADLHGEGKEEISVERHALALLFEFEAHGDYVTCPIARLIRTPQGRF CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEECCCCEEECHHHHHHCCCCCCE ELDPTFVPPCLLVAASDRLTERMKRLSEILAAKSASLAVRRRERSDQIADFAVADVALFW ECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHSVNSNWPELARLCAAPRQHPERLYGVLSRLAGALLTFSTTETLQAIPAYNHLAPEPV HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHH FAELESLIRTLLDTVIPSRVVPVALERTRPTAWVGKILDERLVEGAEYYLSVQAGLPAHT HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEECCCCHHH LLEQLPRLCKAGAPDEVEQIVNSALPGIPLRTMSRLPAAIPVRVENQYFALDSAHPAFQR HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCEEEECCCCHHHHH MLAARACQFYVPASVPDVSLELFAVLPA HHHHHHHHEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA