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The map label for this gene is yiaO [C]

Identifier: 73539047

GI number: 73539047

Start: 1971297

End: 1972334

Strand: Reverse

Name: yiaO [C]

Synonym: Reut_B5224

Alternate gene names: 73539047

Gene position: 1972334-1971297 (Counterclockwise)

Preceding gene: 73539048

Following gene: 73539046

Centisome position: 72.35

GC content: 64.26

Gene sequence:

>1038_bases
ATGAGCGGGTTCAACAACGGGCGCCGCCTGGCGCTTAAGCAGGGCATTGCGCTGGTGGCGGCTTCGGCTGCGTCCGGGCT
GATGATCCACACACCGGCACGTGCCGCGGGGCAGACGTACAACTACAAGCTCGGCATCGCGCTCGATGCGACGCATCCGA
CGACCGTCAACCTGACCGCTGCCGCGGCCGAGATTGCGCGTGCCTCCAACGGCCGCCTGAACATCCGCGTCTTTCCGAAC
AGCCAGCTCGGCAGCGACACCGACATGGTGTCGCAGGTGCGCTCGGGCGCCATCGACCTTGTCAGCACGGCGGGCCTGAT
CTGGGGCACGCTGGTGCCGGCCGCCTCCATCAGCGGGATCGGATTTGCGTTCCCGAGCTACGAGCACGTCTGGAAGGCCA
TGGACGGTGATCTCGGCGCGCATATCCGCGGTGCGTTCGCGAAGGTCAACCTGATGCCGCTGCCGAAGATCTGGGACCAC
GGTTTCCGCCAGGTCACCAGCAGCAACCGGCAGATCAACACGCCGCAGGACCTGAGCGGCTTCAAGATCCGCGTGCCGCT
GAGCCCGGCGCTGACGTCGATGTTCAAGGCCTTCGGCGCCGCGCCGGCGGGCATCAACATGGCGGAGACCTACACCGCGT
TGCAGACGAAGATCGTCGACGGCCAGGAAAACCCGCTGACGATCCTGGGTACGCAGCGGCTCTACGAAGTGCAGAAGTAC
TGCTCGCTGACGTCGCACGTGTGGGATGGCTTCTGGCTCGTCGCGAATCTGCGCACATGGAACGCCTTGCCCGAAGACCT
GCGGCAACTGGCGGCCACTACGTTCGATACGTATGCCGTCAAGCAGCGCCAGGCCGTCGATGCACTCAATACCCGCCTGC
GCGAAGAACTGAAAGGCCGCGGCATGGTGTTTAACCAGCCTGACGTAAAGGTGTTCCGCGATTACCTGAGCAAGGCCGGT
TTCTACCGCGACTGGCAGAAAAAATTCCCGGCCGAAACCTGGGCGCTGCTCGAACAGTACTCGGGCAAGCTGGCCTGA

Upstream 100 bases:

>100_bases
GGGCGGCCTCCCGGCGGCCGCCGCCGTACTGCGCAAGCAGCGCGTGTGAATCGCGCGGAACGCCGGAAACACTACAAGAT
CAGACCGCAGGAGACAAACC

Downstream 100 bases:

>100_bases
CCACAACCCACGGCATTTCCAATCCGGCACCGCTGGCCGGTGGCTGCACGCCACCGCCGCGGCTGCGCTCAACCAGAATT
CCAGGAGACATCATGACCTT

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSGFNNGRRLALKQGIALVAASAASGLMIHTPARAAGQTYNYKLGIALDATHPTTVNLTAAAAEIARASNGRLNIRVFPN
SQLGSDTDMVSQVRSGAIDLVSTAGLIWGTLVPAASISGIGFAFPSYEHVWKAMDGDLGAHIRGAFAKVNLMPLPKIWDH
GFRQVTSSNRQINTPQDLSGFKIRVPLSPALTSMFKAFGAAPAGINMAETYTALQTKIVDGQENPLTILGTQRLYEVQKY
CSLTSHVWDGFWLVANLRTWNALPEDLRQLAATTFDTYAVKQRQAVDALNTRLREELKGRGMVFNQPDVKVFRDYLSKAG
FYRDWQKKFPAETWALLEQYSGKLA

Sequences:

>Translated_345_residues
MSGFNNGRRLALKQGIALVAASAASGLMIHTPARAAGQTYNYKLGIALDATHPTTVNLTAAAAEIARASNGRLNIRVFPN
SQLGSDTDMVSQVRSGAIDLVSTAGLIWGTLVPAASISGIGFAFPSYEHVWKAMDGDLGAHIRGAFAKVNLMPLPKIWDH
GFRQVTSSNRQINTPQDLSGFKIRVPLSPALTSMFKAFGAAPAGINMAETYTALQTKIVDGQENPLTILGTQRLYEVQKY
CSLTSHVWDGFWLVANLRTWNALPEDLRQLAATTFDTYAVKQRQAVDALNTRLREELKGRGMVFNQPDVKVFRDYLSKAG
FYRDWQKKFPAETWALLEQYSGKLA
>Mature_344_residues
SGFNNGRRLALKQGIALVAASAASGLMIHTPARAAGQTYNYKLGIALDATHPTTVNLTAAAAEIARASNGRLNIRVFPNS
QLGSDTDMVSQVRSGAIDLVSTAGLIWGTLVPAASISGIGFAFPSYEHVWKAMDGDLGAHIRGAFAKVNLMPLPKIWDHG
FRQVTSSNRQINTPQDLSGFKIRVPLSPALTSMFKAFGAAPAGINMAETYTALQTKIVDGQENPLTILGTQRLYEVQKYC
SLTSHVWDGFWLVANLRTWNALPEDLRQLAATTFDTYAVKQRQAVDALNTRLREELKGRGMVFNQPDVKVFRDYLSKAGF
YRDWQKKFPAETWALLEQYSGKLA

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=249, Percent_Identity=32.1285140562249, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387
- InterPro:   IPR018389
- InterPro:   IPR006311
- InterPro:   IPR004682 [H]

Pfam domain/function: PF04290 DctQ; PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37768; Mature: 37636

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFNNGRRLALKQGIALVAASAASGLMIHTPARAAGQTYNYKLGIALDATHPTTVNLTA
CCCCCCCCEEHHHHCHHHEEECCCCCEEEECCCHHCCCCEEEEEEEEEECCCCCEEEEHH
AAAEIARASNGRLNIRVFPNSQLGSDTDMVSQVRSGAIDLVSTAGLIWGTLVPAASISGI
HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
GFAFPSYEHVWKAMDGDLGAHIRGAFAKVNLMPLPKIWDHGFRQVTSSNRQINTPQDLSG
CCCCCCHHHHHHHHCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
FKIRVPLSPALTSMFKAFGAAPAGINMAETYTALQTKIVDGQENPLTILGTQRLYEVQKY
CEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHH
CSLTSHVWDGFWLVANLRTWNALPEDLRQLAATTFDTYAVKQRQAVDALNTRLREELKGR
HHHHHHHCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GMVFNQPDVKVFRDYLSKAGFYRDWQKKFPAETWALLEQYSGKLA
CEEECCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGFNNGRRLALKQGIALVAASAASGLMIHTPARAAGQTYNYKLGIALDATHPTTVNLTA
CCCCCCCEEHHHHCHHHEEECCCCCEEEECCCHHCCCCEEEEEEEEEECCCCCEEEEHH
AAAEIARASNGRLNIRVFPNSQLGSDTDMVSQVRSGAIDLVSTAGLIWGTLVPAASISGI
HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
GFAFPSYEHVWKAMDGDLGAHIRGAFAKVNLMPLPKIWDHGFRQVTSSNRQINTPQDLSG
CCCCCCHHHHHHHHCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
FKIRVPLSPALTSMFKAFGAAPAGINMAETYTALQTKIVDGQENPLTILGTQRLYEVQKY
CEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHH
CSLTSHVWDGFWLVANLRTWNALPEDLRQLAATTFDTYAVKQRQAVDALNTRLREELKGR
HHHHHHHCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GMVFNQPDVKVFRDYLSKAGFYRDWQKKFPAETWALLEQYSGKLA
CEEECCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]