Click here to switch to the map view.

The map label for this gene is fliC [H]

Identifier: 73538914

GI number: 73538914

Start: 1831861

End: 1832982

Strand: Direct

Name: fliC [H]

Synonym: Reut_B5089

Alternate gene names: 73538914

Gene position: 1831861-1832982 (Clockwise)

Preceding gene: 73538913

Following gene: 73538915

Centisome position: 67.2

GC content: 62.03

Gene sequence:

>1122_bases
ATGGCGCAAGTCATTAATACCAATTCGTTGTCTCTGATGACTCAGAACAACCTGAACGCTTCGCAATCGTCGCTGAACAC
CGCGATCCAACGCCTGTCGTCGGGTCTGCGCATCAACAGCGCCAAGGATGACGCTGCTGGCCAAGCCATTGCGAACCGCT
TCACCGCCAACATCCGCGGCCTGACCCAAGCCCAGCGCAACGCCAACGACGGCATCTCGCTGGCGCAAACGACCGAAGGC
GCACTGACCGAAGTCAACAACAACCTGCAACGTATCCGTGAACTGAGCGTGCAGGCCGCCAACGGTTCGAACTCGGGCTC
CGACCTGGCTTCGGTCCAGGCTGAAATCAAGCAACGCCTGGACGAAATCGACCGCGTTTCGTCGCAGACGCAGTTCAACG
GCGTGAAGGTCCTGGCCAGCAACTCGAAGATGGCTGTGCAGGTTGGCGCCAACGACGGCGAAACCATCAGCATCGACCTG
AAGCAGATCAACGCCACCACGCTGGGCCTGAACACCCTGAACGTAGCCGGCCCGTCGTCGGCCGGTACCACGACGCCGTA
CGCCTATAACAGCGCCAACACCGCCACTGGTGAAAATGCTGTGGTCCAGGGCCGCGACAACACCGGCGCCAGCGTCGACG
TCGCCGCAGCGGACATGACGTTCACGGATGCGAACGGCGGCACCGCCAACACGCTGGTGCAAGATGACAACGGCCGCTGG
TTCGTCCAGAACGGCACCGATTTCTACGCGGCCACGATCACCGTCAAGGACGCCGCCCAAGGCACGACCACCGCCACCCC
GACGGCAACCGTCACGTTTGATTCGAGCAAGCCGCTGTCGGCCGCTACCCAAAACCCGCTGGCTGCCATCGACGCCGCCC
TGTCGAAGGTCGACGACCTGCGCAGCTCGCTGGGTGCCGTGCAAAACCGTTTTGACTCAGCCATCGCCAACCTGGGCACG
ACCGTGACGAACCTGTCGGCTTCGCGCTCGCGCATTCAGGATGCAGACTACGCAACGGAAGTGTCGAACATGACCCGCGC
GAACATCCTGCAACAGGCTGGTACCTCGGTTCTGGCGCAAGCCAACCAGACCACTCAAGGCGTGCTGTCGCTGCTGCGTT
AA

Upstream 100 bases:

>100_bases
GATAACCCAAACAACGGAGGCACTCTACGCCCTGCAAAGCAGGCAGCCAACGTTACGGCAACTGCCGGAATGCCCAAAAC
TTTGCATACAGGAGTCGTAA

Downstream 100 bases:

>100_bases
TCGCACCTGCGCTGGCAAAAAAGGCTGGGCCGCAAGGCCCGGCCTTTTTGCCGGGAGCGTTTTGCAGGCAGACCACTGCC
TGCAAAGCGTTTCTTTCCGA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MAQVINTNSLSLMTQNNLNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIRGLTQAQRNANDGISLAQTTEG
ALTEVNNNLQRIRELSVQAANGSNSGSDLASVQAEIKQRLDEIDRVSSQTQFNGVKVLASNSKMAVQVGANDGETISIDL
KQINATTLGLNTLNVAGPSSAGTTTPYAYNSANTATGENAVVQGRDNTGASVDVAAADMTFTDANGGTANTLVQDDNGRW
FVQNGTDFYAATITVKDAAQGTTTATPTATVTFDSSKPLSAATQNPLAAIDAALSKVDDLRSSLGAVQNRFDSAIANLGT
TVTNLSASRSRIQDADYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR

Sequences:

>Translated_373_residues
MAQVINTNSLSLMTQNNLNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIRGLTQAQRNANDGISLAQTTEG
ALTEVNNNLQRIRELSVQAANGSNSGSDLASVQAEIKQRLDEIDRVSSQTQFNGVKVLASNSKMAVQVGANDGETISIDL
KQINATTLGLNTLNVAGPSSAGTTTPYAYNSANTATGENAVVQGRDNTGASVDVAAADMTFTDANGGTANTLVQDDNGRW
FVQNGTDFYAATITVKDAAQGTTTATPTATVTFDSSKPLSAATQNPLAAIDAALSKVDDLRSSLGAVQNRFDSAIANLGT
TVTNLSASRSRIQDADYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR
>Mature_372_residues
AQVINTNSLSLMTQNNLNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIRGLTQAQRNANDGISLAQTTEGA
LTEVNNNLQRIRELSVQAANGSNSGSDLASVQAEIKQRLDEIDRVSSQTQFNGVKVLASNSKMAVQVGANDGETISIDLK
QINATTLGLNTLNVAGPSSAGTTTPYAYNSANTATGENAVVQGRDNTGASVDVAAADMTFTDANGGTANTLVQDDNGRWF
VQNGTDFYAATITVKDAAQGTTTATPTATVTFDSSKPLSAATQNPLAAIDAALSKVDDLRSSLGAVQNRFDSAIANLGTT
VTNLSASRSRIQDADYATEVSNMTRANILQQAGTSVLAQANQTTQGVLSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=498, Percent_Identity=45.3815261044177, Blast_Score=313, Evalue=2e-86,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 38727; Mature: 38596

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNSLSLMTQNNLNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIRG
CCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQAQRNANDGISLAQTTEGALTEVNNNLQRIRELSVQAANGSNSGSDLASVQAEIKQRL
HHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH
DEIDRVSSQTQFNGVKVLASNSKMAVQVGANDGETISIDLKQINATTLGLNTLNVAGPSS
HHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEEECEEEECCEEEECCCCCC
AGTTTPYAYNSANTATGENAVVQGRDNTGASVDVAAADMTFTDANGGTANTLVQDDNGRW
CCCCCCEEECCCCCCCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEE
FVQNGTDFYAATITVKDAAQGTTTATPTATVTFDSSKPLSAATQNPLAAIDAALSKVDDL
EEECCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHH
RSSLGAVQNRFDSAIANLGTTVTNLSASRSRIQDADYATEVSNMTRANILQQAGTSVLAQ
HHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHH
ANQTTQGVLSLLR
CCCHHHHHHHHHC
>Mature Secondary Structure 
AQVINTNSLSLMTQNNLNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIRG
CEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQAQRNANDGISLAQTTEGALTEVNNNLQRIRELSVQAANGSNSGSDLASVQAEIKQRL
HHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH
DEIDRVSSQTQFNGVKVLASNSKMAVQVGANDGETISIDLKQINATTLGLNTLNVAGPSS
HHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEEECEEEECCEEEECCCCCC
AGTTTPYAYNSANTATGENAVVQGRDNTGASVDVAAADMTFTDANGGTANTLVQDDNGRW
CCCCCCEEECCCCCCCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEE
FVQNGTDFYAATITVKDAAQGTTTATPTATVTFDSSKPLSAATQNPLAAIDAALSKVDDL
EEECCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHH
RSSLGAVQNRFDSAIANLGTTVTNLSASRSRIQDADYATEVSNMTRANILQQAGTSVLAQ
HHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHH
ANQTTQGVLSLLR
CCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2673930 [H]