| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is 73538646
Identifier: 73538646
GI number: 73538646
Start: 1523593
End: 1524564
Strand: Reverse
Name: 73538646
Synonym: Reut_B4821
Alternate gene names: NA
Gene position: 1524564-1523593 (Counterclockwise)
Preceding gene: 73538647
Following gene: 73538645
Centisome position: 55.92
GC content: 61.11
Gene sequence:
>972_bases ATGAGCCCGCTGCACCAGGACAGCATCATTATCGACGGCCTGAACATCTCGAAGTTCGAGCGGTCGGTGTTCGAAGACAT GAAGAAGGGCGGCGTCACGGCCGCGAACTGTACGGTCTCGGTCTGGGACAATTTCACCAAGACCGTCGACAACATTGCGC TGATGAAGCAGGCGATTCGCGACAACAGCGAACTGCTGACGCTCGTGCGCACCACGGAAGATATCCGCCGTGCAAAGCAT GAGGGCAAGACCGGCGTGATCCTCGGCTTCCAGAACGCGCACGCTTTCGAGGACAACCTCGGCTATGTCGAAGCGTTCGC CGACATGGGCGTGCGCGTCGTGCAACTCTGCTACAACACGCAGAACCTGGTGGGCACCGGATGCTACGAGCGCGACGGCG GCCTGTCGGACTTCGGCCGCGAGGTGATCACCGAGATGAACCGCGTCGGGATCATGGTCGATCTGTCGCACGTTGGGGGC AACACTTCGTCCGAGGCGATTGCGTTCTCGAAAAAGCCGGTCTGCTACTCGCACTGTCTGCCGTCGGGCCTCAAGGAACA TCCGCGCAACAAGAGCGATGCGCAGCTGAAGGAGATCGCCGATGCGGGCGGCTTCGTCGGCGTGACGATGTTCGCGCCGT TCCTCAAGCGCGGAATCGAGGCGACGGTCGACGACTACATCGAAGCGATCGACTACGTGGTCAACCTCATCGGCGAGGAT GCGGTCGGCATCGGCACCGACTTCACGCAGGGCTACAGCACCGAGTTCTTCGACATGCTGACGCATGACAAGGGCCGCTA CCGGCGCCTGACCAACTTCGGCAAGGTGATCAACCCTGAAGGGATCCGCACCATCGGCGATTTTCCGAACCTGACCGCGG CGATGGAACGAGCTGGCTGGAAGGCATCTCGCATCCGCAAGATCATGGGCGAGAACTGGGTGCGCATCTTCAAGGAAGTG TGGGGCGCCTGA
Upstream 100 bases:
>100_bases CGACGCTGTCACCGAGCAGCGCGTGCGCCAGCAAATCTTCGCGCTGTGCGATCGCTTCCCGATCTACTGACCCGAACGAA CGATAAGACTGGAGCCCCCC
Downstream 100 bases:
>100_bases CCCCCGCACCGCGCCAGCTTTCCATCAAATCACCACAAACGGGACGGGCGTGCGCGATAGCGCGCGCTCGCGGGCGACGC CGCGTCTACGCAACGCTACC
Product: membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSPLHQDSIIIDGLNISKFERSVFEDMKKGGVTAANCTVSVWDNFTKTVDNIALMKQAIRDNSELLTLVRTTEDIRRAKH EGKTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGG NTSSEAIAFSKKPVCYSHCLPSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIEATVDDYIEAIDYVVNLIGED AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVINPEGIRTIGDFPNLTAAMERAGWKASRIRKIMGENWVRIFKEV WGA
Sequences:
>Translated_323_residues MSPLHQDSIIIDGLNISKFERSVFEDMKKGGVTAANCTVSVWDNFTKTVDNIALMKQAIRDNSELLTLVRTTEDIRRAKH EGKTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGG NTSSEAIAFSKKPVCYSHCLPSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIEATVDDYIEAIDYVVNLIGED AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVINPEGIRTIGDFPNLTAAMERAGWKASRIRKIMGENWVRIFKEV WGA >Mature_322_residues SPLHQDSIIIDGLNISKFERSVFEDMKKGGVTAANCTVSVWDNFTKTVDNIALMKQAIRDNSELLTLVRTTEDIRRAKHE GKTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNTQNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGN TSSEAIAFSKKPVCYSHCLPSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIEATVDDYIEAIDYVVNLIGEDA VGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVINPEGIRTIGDFPNLTAAMERAGWKASRIRKIMGENWVRIFKEVW GA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=291, Percent_Identity=25.085910652921, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI4758190, Length=291, Percent_Identity=25.085910652921, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI11641269, Length=291, Percent_Identity=25.085910652921, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI193211608, Length=279, Percent_Identity=22.9390681003584, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI193211610, Length=279, Percent_Identity=22.9390681003584, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI281362638, Length=318, Percent_Identity=29.2452830188679, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI281362636, Length=318, Percent_Identity=29.2452830188679, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI221475880, Length=317, Percent_Identity=26.813880126183, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI161083233, Length=310, Percent_Identity=25.1612903225806, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 35813; Mature: 35682
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLHQDSIIIDGLNISKFERSVFEDMKKGGVTAANCTVSVWDNFTKTVDNIALMKQAIR CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEECCEEHHHHHHHHHHHHHHHHHHHHH DNSELLTLVRTTEDIRRAKHEGKTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNT CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHCC QNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGNTSSEAIAFSKKPVCYSHCL CHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEHHCCCCCCCCCEEECCCCCHHHHHC PSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIEATVDDYIEAIDYVVNLIGED CCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVINPEGIRTIGDFPNLTAAMERAGW CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC KASRIRKIMGENWVRIFKEVWGA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPLHQDSIIIDGLNISKFERSVFEDMKKGGVTAANCTVSVWDNFTKTVDNIALMKQAIR CCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEECCEEHHHHHHHHHHHHHHHHHHHHH DNSELLTLVRTTEDIRRAKHEGKTGVILGFQNAHAFEDNLGYVEAFADMGVRVVQLCYNT CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHCC QNLVGTGCYERDGGLSDFGREVITEMNRVGIMVDLSHVGGNTSSEAIAFSKKPVCYSHCL CHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEHHCCCCCCCCCEEECCCCCHHHHHC PSGLKEHPRNKSDAQLKEIADAGGFVGVTMFAPFLKRGIEATVDDYIEAIDYVVNLIGED CCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC AVGIGTDFTQGYSTEFFDMLTHDKGRYRRLTNFGKVINPEGIRTIGDFPNLTAAMERAGW CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC KASRIRKIMGENWVRIFKEVWGA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]