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The map label for this gene is bfrD [H]

Identifier: 73538485

GI number: 73538485

Start: 1349615

End: 1351858

Strand: Direct

Name: bfrD [H]

Synonym: Reut_B4659

Alternate gene names: 73538485

Gene position: 1349615-1351858 (Clockwise)

Preceding gene: 73538484

Following gene: 73538498

Centisome position: 49.51

GC content: 63.77

Gene sequence:

>2244_bases
TTGAACCCGCTCGCCGCAGCGCTAACCGGTACCGTCGCGGCGTTCGCCATGCAAAGCGCCGGCGCGCAGGAAAACCAGCC
GGCCGCCGAGCTTGCGGCCGCGTCGAAGCCGGTGACGCTGCAAAGCGTGACGGTGACGAGCACGAAGGACGATGGCTACA
AGGTGGACGAAGCCCAGTCGTCCAAGTTCACCGCCCCGCTGCTCGACACGCCGAAGTCCGTCACCGTCGTGCCGGCCGAA
GTGCTGCAGCAGACCGGCTCCAACTCGCTGCAGGACGCCTTGCGTACCACGCCGGGCATCACGTTCGGCGCCGGCGAAGG
CGGCAACCCGATCGGCGACCGTCCTTTCATCCGCGGTTTCGACTCGATGTCGAGCATCTACGTCGATGGCGTGCGCGACA
CAGCCTCGCAGACGCGCGACATGTTCAACATCGACCGCGTCGAAGTCATCAAGGGACCGAGCTCGGCCTTCGGCGGCAAG
GGTTCGGCCGGCGGCATGATCAACCTCGTGTCGAAGCTGCCCACCGCCGAGAACTTCGTGCAGGGTTCGGTCGGCGTGGG
CACGGATTCGTACTTCCGCGCCACGGCTGACGGCAACTACCTTCTCAACGACAACACCGCGGTGCGCCTGAACGCGATGG
GCCAGTCCTTCGACGTGCCGGGCCGCAACGAAGTCGACCAGCACTCTTGGGGCTTTGCGCCATCGGTGACCTTCGGCCTG
AGTTCGCCCACGCAGGTCACGCTGTCCTACTACCACTTGCAGGGCGACGGCATGCCTGACTACAGCATCCCGTACGCGCG
CCCGTCCAGCCAGGCGACCAAGGCCAACCCGTCGGCGCCGGCCAGCGTCGACCGCAATAACTTCTACGGGCTGACCGATC
GCGACTTCCAGCGTACGCAGTCCGACATTGCCACCGCATCGGTCCAGCATGATTTCCGCAACGGCCTCGTGTTCCGCAAC
ACGACACGCTGGGGCCGTGCAACGAACGACTACGTCGTCACGAATCCCGACGACAGCCGCGGCAACGTGCCGCGCGGCTT
CGTATGGCGCAACACCAAGAACCGCGACTCGGCCACCGAGACCCTGACCAACCAGACCGACCTGACGTCGGAGTTCCACA
CCGGCAGCCTCAAGCACAACCTGCTGTTCGGCTTCGAGTTCAGCCGCGATAACACGGACAACAACCCGTACAACGTGGTG
TCGGCCAACGCGGCCGCATCGGGTGGCACTTGCAACGCTTCGCTACTGGCGAGCTTCGACTGCGCGCCGCTGGGCAATCC
GAACCCGAACGATCCGTGGCGCGGCAGCATCACCAAGATGCCGTACACGCAGACCACAACGACCAATACGCAATCGGTCT
ACCTGTTCGACACGATCGAAATCACCAAGCAGTGGCTGGTCAACGGCGGCATCCGCTACGACAACTACGACACGCACTCC
TTCACCAACGCGTACACCAACCCGAACACCGGCGCGGCCGTGGCGCAGGTGGACATCCGCAACCAGTCGCACTTCTTCAA
CTACCAGGCCGGCGTGGTGTACAAGCCGGTCGAGTACGGCAGCATCTATGTGTCGTACGGCACGTCGTCGACGCCGCCCG
GTTCGACCAATGGCGACGGCGCGGACAACATCACCGCGGCGCAGCGCAATCTCGAGCCTGAAACCGCGCGCTCGTTCGAA
ATCGGCACCAAGTGGGACCTGCTGTCGCGCCGCCTGTCGCTGACCGGTGCGATCTTCCAGATCGAGAAGAACAATGCGCG
CGTGGCCATTGACGCCAACACTACCGTCAACGCGGGCAAGCAGCGCGTGAAGGGCTTCGAGCTGGGCTTCGCCGGCAACC
TGACCGACAAGTGGGGCGTATTCGGCGGCTATACCCACCTGGACAGCGAACTGATCGATAACGGCCCGCAAGCCGCGAAC
GCCGCCAACAACGGCAACCAGTTCCCCAACACGCCGAAAAGCAGCTTCAGCCTGTGGACGACTTACCAGGTACTGGCACC
GCTGACGATCGGCGCAGGCGCCTACTATGTCGACAAGGTCTACGCCAATCCGGCCAACTCGCTGTACGTGCCGTCGTACT
GGCGCTTCGACCTGATGGGTGCGTACCGCGTGAACAAGAACCTGACGCTGCAGTTGAACATCCAGAACCTGTTCGACAAG
ACGTACTACACCAAGGCGCATACGCACTACGGCGCTCTGGCGCCGGGCCGCTTTGGTATGCTGACGGCGAACTTCAGGTT
CTGA

Upstream 100 bases:

>100_bases
TTCATCGTTGCCTGAACTTGTCTTCATGACGATGCATTGATCGCGTCAAGAACTACAAAGGGAAGGTAGAACCGTGGAAG
GAAAACAGGAAAAATTCCGT

Downstream 100 bases:

>100_bases
GGCTGAATGGATTCAAGCGTTGCGAGCAACCGCGGGTTCTGGCTTTTTGTGCCGGAGCCCGCGGTTTTTTGTTGTTTTAA
CAGGCTCTTTGGCGCTTGCG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 747; Mature: 747

Protein sequence:

>747_residues
MNPLAAALTGTVAAFAMQSAGAQENQPAAELAAASKPVTLQSVTVTSTKDDGYKVDEAQSSKFTAPLLDTPKSVTVVPAE
VLQQTGSNSLQDALRTTPGITFGAGEGGNPIGDRPFIRGFDSMSSIYVDGVRDTASQTRDMFNIDRVEVIKGPSSAFGGK
GSAGGMINLVSKLPTAENFVQGSVGVGTDSYFRATADGNYLLNDNTAVRLNAMGQSFDVPGRNEVDQHSWGFAPSVTFGL
SSPTQVTLSYYHLQGDGMPDYSIPYARPSSQATKANPSAPASVDRNNFYGLTDRDFQRTQSDIATASVQHDFRNGLVFRN
TTRWGRATNDYVVTNPDDSRGNVPRGFVWRNTKNRDSATETLTNQTDLTSEFHTGSLKHNLLFGFEFSRDNTDNNPYNVV
SANAAASGGTCNASLLASFDCAPLGNPNPNDPWRGSITKMPYTQTTTTNTQSVYLFDTIEITKQWLVNGGIRYDNYDTHS
FTNAYTNPNTGAAVAQVDIRNQSHFFNYQAGVVYKPVEYGSIYVSYGTSSTPPGSTNGDGADNITAAQRNLEPETARSFE
IGTKWDLLSRRLSLTGAIFQIEKNNARVAIDANTTVNAGKQRVKGFELGFAGNLTDKWGVFGGYTHLDSELIDNGPQAAN
AANNGNQFPNTPKSSFSLWTTYQVLAPLTIGAGAYYVDKVYANPANSLYVPSYWRFDLMGAYRVNKNLTLQLNIQNLFDK
TYYTKAHTHYGALAPGRFGMLTANFRF

Sequences:

>Translated_747_residues
MNPLAAALTGTVAAFAMQSAGAQENQPAAELAAASKPVTLQSVTVTSTKDDGYKVDEAQSSKFTAPLLDTPKSVTVVPAE
VLQQTGSNSLQDALRTTPGITFGAGEGGNPIGDRPFIRGFDSMSSIYVDGVRDTASQTRDMFNIDRVEVIKGPSSAFGGK
GSAGGMINLVSKLPTAENFVQGSVGVGTDSYFRATADGNYLLNDNTAVRLNAMGQSFDVPGRNEVDQHSWGFAPSVTFGL
SSPTQVTLSYYHLQGDGMPDYSIPYARPSSQATKANPSAPASVDRNNFYGLTDRDFQRTQSDIATASVQHDFRNGLVFRN
TTRWGRATNDYVVTNPDDSRGNVPRGFVWRNTKNRDSATETLTNQTDLTSEFHTGSLKHNLLFGFEFSRDNTDNNPYNVV
SANAAASGGTCNASLLASFDCAPLGNPNPNDPWRGSITKMPYTQTTTTNTQSVYLFDTIEITKQWLVNGGIRYDNYDTHS
FTNAYTNPNTGAAVAQVDIRNQSHFFNYQAGVVYKPVEYGSIYVSYGTSSTPPGSTNGDGADNITAAQRNLEPETARSFE
IGTKWDLLSRRLSLTGAIFQIEKNNARVAIDANTTVNAGKQRVKGFELGFAGNLTDKWGVFGGYTHLDSELIDNGPQAAN
AANNGNQFPNTPKSSFSLWTTYQVLAPLTIGAGAYYVDKVYANPANSLYVPSYWRFDLMGAYRVNKNLTLQLNIQNLFDK
TYYTKAHTHYGALAPGRFGMLTANFRF
>Mature_747_residues
MNPLAAALTGTVAAFAMQSAGAQENQPAAELAAASKPVTLQSVTVTSTKDDGYKVDEAQSSKFTAPLLDTPKSVTVVPAE
VLQQTGSNSLQDALRTTPGITFGAGEGGNPIGDRPFIRGFDSMSSIYVDGVRDTASQTRDMFNIDRVEVIKGPSSAFGGK
GSAGGMINLVSKLPTAENFVQGSVGVGTDSYFRATADGNYLLNDNTAVRLNAMGQSFDVPGRNEVDQHSWGFAPSVTFGL
SSPTQVTLSYYHLQGDGMPDYSIPYARPSSQATKANPSAPASVDRNNFYGLTDRDFQRTQSDIATASVQHDFRNGLVFRN
TTRWGRATNDYVVTNPDDSRGNVPRGFVWRNTKNRDSATETLTNQTDLTSEFHTGSLKHNLLFGFEFSRDNTDNNPYNVV
SANAAASGGTCNASLLASFDCAPLGNPNPNDPWRGSITKMPYTQTTTTNTQSVYLFDTIEITKQWLVNGGIRYDNYDTHS
FTNAYTNPNTGAAVAQVDIRNQSHFFNYQAGVVYKPVEYGSIYVSYGTSSTPPGSTNGDGADNITAAQRNLEPETARSFE
IGTKWDLLSRRLSLTGAIFQIEKNNARVAIDANTTVNAGKQRVKGFELGFAGNLTDKWGVFGGYTHLDSELIDNGPQAAN
AANNGNQFPNTPKSSFSLWTTYQVLAPLTIGAGAYYVDKVYANPANSLYVPSYWRFDLMGAYRVNKNLTLQLNIQNLFDK
TYYTKAHTHYGALAPGRFGMLTANFRF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=757, Percent_Identity=35.2708058124174, Blast_Score=406, Evalue=1e-114,
Organism=Escherichia coli, GI1786344, Length=744, Percent_Identity=25.9408602150538, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1787344, Length=767, Percent_Identity=23.9895697522816, Blast_Score=114, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 80928; Mature: 80928

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLAAALTGTVAAFAMQSAGAQENQPAAELAAASKPVTLQSVTVTSTKDDGYKVDEAQS
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCEECCCCCC
SKFTAPLLDTPKSVTVVPAEVLQQTGSNSLQDALRTTPGITFGAGEGGNPIGDRPFIRGF
CCCCCCCCCCCCCEEEECHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCC
DSMSSIYVDGVRDTASQTRDMFNIDRVEVIKGPSSAFGGKGSAGGMINLVSKLPTAENFV
CCCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHH
QGSVGVGTDSYFRATADGNYLLNDNTAVRLNAMGQSFDVPGRNEVDQHSWGFAPSVTFGL
CCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECC
SSPTQVTLSYYHLQGDGMPDYSIPYARPSSQATKANPSAPASVDRNNFYGLTDRDFQRTQ
CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SDIATASVQHDFRNGLVFRNTTRWGRATNDYVVTNPDDSRGNVPRGFVWRNTKNRDSATE
HHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHH
TLTNQTDLTSEFHTGSLKHNLLFGFEFSRDNTDNNPYNVVSANAAASGGTCNASLLASFD
HHCCCHHCCHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECC
CAPLGNPNPNDPWRGSITKMPYTQTTTTNTQSVYLFDTIEITKQWLVNGGIRYDNYDTHS
CCCCCCCCCCCCCCCCEEECCCEEECCCCCCEEEEEEHHHHHHHHHHCCCEEECCCCCCC
FTNAYTNPNTGAAVAQVDIRNQSHFFNYQAGVVYKPVEYGSIYVSYGTSSTPPGSTNGDG
CCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEECCEECCEEEEECCCCCCCCCCCCCCC
ADNITAAQRNLEPETARSFEIGTKWDLLSRRLSLTGAIFQIEKNNARVAIDANTTVNAGK
CCCCHHHHHCCCCCHHCCEECCCHHHHHHHHHHEEEEEEEEECCCCEEEEECCCCCCCCH
QRVKGFELGFAGNLTDKWGVFGGYTHLDSELIDNGPQAANAANNGNQFPNTPKSSFSLWT
HHCCEEEEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
TYQVLAPLTIGAGAYYVDKVYANPANSLYVPSYWRFDLMGAYRVNKNLTLQLNIQNLFDK
HEEEHCCEEECCCEEEEEEEECCCCCCEECCCEEEEEEEEEEEECCCEEEEEEHHHHHCH
TYYTKAHTHYGALAPGRFGMLTANFRF
HHEEECCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MNPLAAALTGTVAAFAMQSAGAQENQPAAELAAASKPVTLQSVTVTSTKDDGYKVDEAQS
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCEECCCCCC
SKFTAPLLDTPKSVTVVPAEVLQQTGSNSLQDALRTTPGITFGAGEGGNPIGDRPFIRGF
CCCCCCCCCCCCCEEEECHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCC
DSMSSIYVDGVRDTASQTRDMFNIDRVEVIKGPSSAFGGKGSAGGMINLVSKLPTAENFV
CCCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHH
QGSVGVGTDSYFRATADGNYLLNDNTAVRLNAMGQSFDVPGRNEVDQHSWGFAPSVTFGL
CCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECC
SSPTQVTLSYYHLQGDGMPDYSIPYARPSSQATKANPSAPASVDRNNFYGLTDRDFQRTQ
CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
SDIATASVQHDFRNGLVFRNTTRWGRATNDYVVTNPDDSRGNVPRGFVWRNTKNRDSATE
HHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHH
TLTNQTDLTSEFHTGSLKHNLLFGFEFSRDNTDNNPYNVVSANAAASGGTCNASLLASFD
HHCCCHHCCHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECC
CAPLGNPNPNDPWRGSITKMPYTQTTTTNTQSVYLFDTIEITKQWLVNGGIRYDNYDTHS
CCCCCCCCCCCCCCCCEEECCCEEECCCCCCEEEEEEHHHHHHHHHHCCCEEECCCCCCC
FTNAYTNPNTGAAVAQVDIRNQSHFFNYQAGVVYKPVEYGSIYVSYGTSSTPPGSTNGDG
CCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEECCEECCEEEEECCCCCCCCCCCCCCC
ADNITAAQRNLEPETARSFEIGTKWDLLSRRLSLTGAIFQIEKNNARVAIDANTTVNAGK
CCCCHHHHHCCCCCHHCCEECCCHHHHHHHHHHEEEEEEEEECCCCEEEEECCCCCCCCH
QRVKGFELGFAGNLTDKWGVFGGYTHLDSELIDNGPQAANAANNGNQFPNTPKSSFSLWT
HHCCEEEEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
TYQVLAPLTIGAGAYYVDKVYANPANSLYVPSYWRFDLMGAYRVNKNLTLQLNIQNLFDK
HEEEHCCEEECCCEEEEEEEECCCCCCEECCCEEEEEEEEEEEECCCEEEEEEHHHHHCH
TYYTKAHTHYGALAPGRFGMLTANFRF
HHEEECCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]