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The map label for this gene is kipR [H]

Identifier: 73538454

GI number: 73538454

Start: 1314000

End: 1314857

Strand: Reverse

Name: kipR [H]

Synonym: Reut_B4627

Alternate gene names: 73538454

Gene position: 1314857-1314000 (Counterclockwise)

Preceding gene: 73538455

Following gene: 73538450

Centisome position: 48.23

GC content: 69.58

Gene sequence:

>858_bases
ATGGCGACACGCCCGTCCCCTGTGCAGCGCGCGCTGGCAGTATTGCGCGCGCTATCCGATCCTGAAGTGCGCCGCATGAG
CGATGTTGCGCGCGCCACGGGTCTTGACCCCGCCACGACGTCGCGCATGCTCGACATGCTGGTGCAGGAAGGCTTCGCCA
CGCGCGACGACAAGCGTTGCTATGGCATTGGCCCCGAGGTGTTCCAGCTTGCCGATGTGGGGCAGCGGCGCGTCGACCTG
CGCGAGCTGGCCCATCCGGCGTTGCAGCGGTTGCAGGAGACGTTTGAAGACACCGCGGTGCTCACCGAGGCCAGCCGCGG
CGAGGCCGTGTGCTCGGACGTCGTCACCGGGTCGTTTCCTGTGCATGCGAACTATGTGACAGTCGGCACACGGCGACCGC
TAGGCGTCGGCGCGGGCAGTCTCGCCGTGCTCGCGTGGCTGCCACCGGCGGAACGCACGCGCCGTCTGCAGCAGACGGCC
CGCAAGCTGGCGAACTATCCGCGGCTGCATGCGCCGTCGATTGCCGCCGAGGCGGACGCGGCACGCGCGCGCGGCTATGT
ACTGTTCCTGGACTGGGTGGTCGAAGGCATGGGCGGCATTGCCGTGCCGATTCTCGACTATGACGGTCGGCCCATCGGCG
CGCTCAGCGTGGCGGCGCTGAGCGATCGCATTCGCAGCCGCGAGGCAAGCCTTGCGCGTCACCTCCTCCAGGAAGCGCGC
CGCATCACCGGCGCGTGGACGCGCGTCGTGGTGCCGGCGGGCGGCCCTCAGTGTGCCGGGCCACGCAGTAGCGGCGAGAG
CCCGTCGGGAATCTCCACTTCAAAGCGCAGCACGGCGCTGGCGAGCGCTTTGCCGTAG

Upstream 100 bases:

>100_bases
GCCCGACCGAAGTCCACAAGTGGTCGCTCGCGAAGAAAATCAAGCGCGACACGCTCGGCACGCGTCAACATGGCTGATTG
CGTTTGCTGAGCCCCGCATC

Downstream 100 bases:

>100_bases
TTATCGATGGCGAGGCTTCGCGAGACGCCGCCGCCCAGTGCACCGTCGGCGACGAAATTGAGAACCTGCAAGCCATCAAC
GTCATAGCGCGTGACGGCTC

Product: regulatory protein IclR

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MATRPSPVQRALAVLRALSDPEVRRMSDVARATGLDPATTSRMLDMLVQEGFATRDDKRCYGIGPEVFQLADVGQRRVDL
RELAHPALQRLQETFEDTAVLTEASRGEAVCSDVVTGSFPVHANYVTVGTRRPLGVGAGSLAVLAWLPPAERTRRLQQTA
RKLANYPRLHAPSIAAEADAARARGYVLFLDWVVEGMGGIAVPILDYDGRPIGALSVAALSDRIRSREASLARHLLQEAR
RITGAWTRVVVPAGGPQCAGPRSSGESPSGISTSKRSTALASALP

Sequences:

>Translated_285_residues
MATRPSPVQRALAVLRALSDPEVRRMSDVARATGLDPATTSRMLDMLVQEGFATRDDKRCYGIGPEVFQLADVGQRRVDL
RELAHPALQRLQETFEDTAVLTEASRGEAVCSDVVTGSFPVHANYVTVGTRRPLGVGAGSLAVLAWLPPAERTRRLQQTA
RKLANYPRLHAPSIAAEADAARARGYVLFLDWVVEGMGGIAVPILDYDGRPIGALSVAALSDRIRSREASLARHLLQEAR
RITGAWTRVVVPAGGPQCAGPRSSGESPSGISTSKRSTALASALP
>Mature_284_residues
ATRPSPVQRALAVLRALSDPEVRRMSDVARATGLDPATTSRMLDMLVQEGFATRDDKRCYGIGPEVFQLADVGQRRVDLR
ELAHPALQRLQETFEDTAVLTEASRGEAVCSDVVTGSFPVHANYVTVGTRRPLGVGAGSLAVLAWLPPAERTRRLQQTAR
KLANYPRLHAPSIAAEADAARARGYVLFLDWVVEGMGGIAVPILDYDGRPIGALSVAALSDRIRSREASLARHLLQEARR
ITGAWTRVVVPAGGPQCAGPRSSGESPSGISTSKRSTALASALP

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 30509; Mature: 30378

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED ; PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRPSPVQRALAVLRALSDPEVRRMSDVARATGLDPATTSRMLDMLVQEGFATRDDKRC
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE
YGIGPEVFQLADVGQRRVDLRELAHPALQRLQETFEDTAVLTEASRGEAVCSDVVTGSFP
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
VHANYVTVGTRRPLGVGAGSLAVLAWLPPAERTRRLQQTARKLANYPRLHAPSIAAEADA
EEEEEEEECCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ARARGYVLFLDWVVEGMGGIAVPILDYDGRPIGALSVAALSDRIRSREASLARHLLQEAR
HHHCCCEEEHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RITGAWTRVVVPAGGPQCAGPRSSGESPSGISTSKRSTALASALP
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
ATRPSPVQRALAVLRALSDPEVRRMSDVARATGLDPATTSRMLDMLVQEGFATRDDKRC
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE
YGIGPEVFQLADVGQRRVDLRELAHPALQRLQETFEDTAVLTEASRGEAVCSDVVTGSFP
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
VHANYVTVGTRRPLGVGAGSLAVLAWLPPAERTRRLQQTARKLANYPRLHAPSIAAEADA
EEEEEEEECCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ARARGYVLFLDWVVEGMGGIAVPILDYDGRPIGALSVAALSDRIRSREASLARHLLQEAR
HHHCCCEEEHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RITGAWTRVVVPAGGPQCAGPRSSGESPSGISTSKRSTALASALP
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]