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The map label for this gene is kipR [H]

Identifier: 73538444

GI number: 73538444

Start: 1305027

End: 1305755

Strand: Direct

Name: kipR [H]

Synonym: Reut_B4617

Alternate gene names: 73538444

Gene position: 1305027-1305755 (Clockwise)

Preceding gene: 73538434

Following gene: 73538449

Centisome position: 47.87

GC content: 65.29

Gene sequence:

>729_bases
ATGAGTAATCACGGTGTCGCTGCAGTCGAGAAGGCGCTCGGCTTGCTGGACTGCTTTCGGCTCGGGGCCGAAATCCAGTC
GCTTGCGCAACTCGCCGCAGCCTCGGGCATGCACAAGACCACGGTCTTCCGCCTGTTGAATTCGCTGGAGCGAATGAGCT
ACGTGGTGCGCACGGCCGACGGCCGGTACGCGCTGGGGCCGCGCCTGCTCTATCTGGGAAAGCTATACGAGTCGTCGTTC
CAGCTCGGCTCGGTCATCGAGCCCGTCCTGCAGGAACTTGCGCTGGCCACGCGCGAAAGCGCGTCCTACTACGTGCTCCA
TGGCGACGAGCAGCGCATGTGCCTGTATCGCGCCGAGCCCAGCGAAGGCCTGCGGGAAACGCGCTTGCCGGGCACGATAT
TGCCGCTCGACGATACGGCAATCGGCTCCGTCCTGAAGTACTGGGGCAAGGAAGAAGCGTCCGCGAAGCGCGATGATCCG
TTGCCCTGGTTCACGTCCGGCGTCCGGGACGTATACACGGCGGCGTTCGCTACGCCCTTGTTCGGTGCCGGTGACAAATT
CGTGGCCGCGCTCACGCTGTCCGGGCCGGCGTCACGCCTGGAAGCGGCGGACCGCTCGGAAATCACGCGCGTGCAGCTCG
TCGCCGCGGCGAAGCTGTCGCGGTTGCTGGGCGCCAGTCCGGCGTGGTGCGAAACGGTCTATCAATCGGCCAGTTTCGTG
CACGACTGA

Upstream 100 bases:

>100_bases
AGTATGTCCGCCCGGATGTTCCACTTCTCGTTTACCCCTGTACGTGTCAAAACACCGTTGTACTATGTACAATGCTCACA
CCATAGCCAGGAATGGATCG

Downstream 100 bases:

>100_bases
GCGTTCCACCGGACTGAAACCGTCTGGCAACGCGCCCTACGCTGCGTAGGCGAATTCCCCGCCGCCGTCAGGCAAGCAGT
GACAAGGCATCTGCGAGCGA

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSNHGVAAVEKALGLLDCFRLGAEIQSLAQLAAASGMHKTTVFRLLNSLERMSYVVRTADGRYALGPRLLYLGKLYESSF
QLGSVIEPVLQELALATRESASYYVLHGDEQRMCLYRAEPSEGLRETRLPGTILPLDDTAIGSVLKYWGKEEASAKRDDP
LPWFTSGVRDVYTAAFATPLFGAGDKFVAALTLSGPASRLEAADRSEITRVQLVAAAKLSRLLGASPAWCETVYQSASFV
HD

Sequences:

>Translated_242_residues
MSNHGVAAVEKALGLLDCFRLGAEIQSLAQLAAASGMHKTTVFRLLNSLERMSYVVRTADGRYALGPRLLYLGKLYESSF
QLGSVIEPVLQELALATRESASYYVLHGDEQRMCLYRAEPSEGLRETRLPGTILPLDDTAIGSVLKYWGKEEASAKRDDP
LPWFTSGVRDVYTAAFATPLFGAGDKFVAALTLSGPASRLEAADRSEITRVQLVAAAKLSRLLGASPAWCETVYQSASFV
HD
>Mature_241_residues
SNHGVAAVEKALGLLDCFRLGAEIQSLAQLAAASGMHKTTVFRLLNSLERMSYVVRTADGRYALGPRLLYLGKLYESSFQ
LGSVIEPVLQELALATRESASYYVLHGDEQRMCLYRAEPSEGLRETRLPGTILPLDDTAIGSVLKYWGKEEASAKRDDPL
PWFTSGVRDVYTAAFATPLFGAGDKFVAALTLSGPASRLEAADRSEITRVQLVAAAKLSRLLGASPAWCETVYQSASFVH
D

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 26321; Mature: 26190

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHGVAAVEKALGLLDCFRLGAEIQSLAQLAAASGMHKTTVFRLLNSLERMSYVVRTAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
GRYALGPRLLYLGKLYESSFQLGSVIEPVLQELALATRESASYYVLHGDEQRMCLYRAEP
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCC
SEGLRETRLPGTILPLDDTAIGSVLKYWGKEEASAKRDDPLPWFTSGVRDVYTAAFATPL
CCCHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
FGAGDKFVAALTLSGPASRLEAADRSEITRVQLVAAAKLSRLLGASPAWCETVYQSASFV
CCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
HD
CC
>Mature Secondary Structure 
SNHGVAAVEKALGLLDCFRLGAEIQSLAQLAAASGMHKTTVFRLLNSLERMSYVVRTAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
GRYALGPRLLYLGKLYESSFQLGSVIEPVLQELALATRESASYYVLHGDEQRMCLYRAEP
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCC
SEGLRETRLPGTILPLDDTAIGSVLKYWGKEEASAKRDDPLPWFTSGVRDVYTAAFATPL
CCCHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
FGAGDKFVAALTLSGPASRLEAADRSEITRVQLVAAAKLSRLLGASPAWCETVYQSASFV
CCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
HD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]