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The map label for this gene is cyoD [H]

Identifier: 73538403

GI number: 73538403

Start: 1256112

End: 1256507

Strand: Reverse

Name: cyoD [H]

Synonym: Reut_B4576

Alternate gene names: 73538403

Gene position: 1256507-1256112 (Counterclockwise)

Preceding gene: 73538404

Following gene: 73538401

Centisome position: 46.09

GC content: 62.88

Gene sequence:

>396_bases
ATGACGACTTCTCACGCTTCGCACGCTACTCACGCCGCGCATGATGCGGCTGCTCACGACGGCTCGCATGGATCGCCGCG
CAGCTATGCGATCGGCTTCGCGCTATCGCTCGTCCTGACCTTTGCCTCGTTCGGCGCCGTGATGAGCGGCGCGCTGCCGC
CCGGCATGGGTTTGCCGGTTATCGTCGGGCTGTGCGTTGCCCAGTTGCTTGTGCAACTGAGCTTCTTCCTGCATCTCGGC
ATCGGCAAGGGCCAGCGCGGCAATAGCGGGATCTTCGCGTGTACGTTCGGGCTGATCGTAATCGTCATCGCCGGCTCGCT
GTGGGTCATGCATAACGCCGACACCAATATGATGCCGACGCAAATGACGATCGAGCGGGCGCGGGCGAAGGACTGA

Upstream 100 bases:

>100_bases
CCATCGTGCGCCGACGGCTCGCGTGCCTGAGCCTGTTCTGGCACTTCCTGGACCTGGTCTGGATCTGCGTCTTTACGTTC
GTCTACCTGAGGGCCTTCGC

Downstream 100 bases:

>100_bases
GCGATCAGGACGCCTGCGGCATGGTGACGCCACCGCGCTGCATGGCCAGCGCGGACCACGCAAACACGATAAGTCCGCCC
ACAGCGAGCAGGGCGCCGAC

Product: cytochrome O ubiquinol oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Cytochrome o ubiquinol oxidase subunit IV [H]

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTTSHASHATHAAHDAAAHDGSHGSPRSYAIGFALSLVLTFASFGAVMSGALPPGMGLPVIVGLCVAQLLVQLSFFLHLG
IGKGQRGNSGIFACTFGLIVIVIAGSLWVMHNADTNMMPTQMTIERARAKD

Sequences:

>Translated_131_residues
MTTSHASHATHAAHDAAAHDGSHGSPRSYAIGFALSLVLTFASFGAVMSGALPPGMGLPVIVGLCVAQLLVQLSFFLHLG
IGKGQRGNSGIFACTFGLIVIVIAGSLWVMHNADTNMMPTQMTIERARAKD
>Mature_130_residues
TTSHASHATHAAHDAAAHDGSHGSPRSYAIGFALSLVLTFASFGAVMSGALPPGMGLPVIVGLCVAQLLVQLSFFLHLGI
GKGQRGNSGIFACTFGLIVIVIAGSLWVMHNADTNMMPTQMTIERARAKD

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=101, Percent_Identity=41.5841584158416, Blast_Score=79, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 13601; Mature: 13470

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSHASHATHAAHDAAAHDGSHGSPRSYAIGFALSLVLTFASFGAVMSGALPPGMGLPV
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IVGLCVAQLLVQLSFFLHLGIGKGQRGNSGIFACTFGLIVIVIAGSLWVMHNADTNMMPT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCH
QMTIERARAKD
HHHHHHHHCCC
>Mature Secondary Structure 
TTSHASHATHAAHDAAAHDGSHGSPRSYAIGFALSLVLTFASFGAVMSGALPPGMGLPV
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IVGLCVAQLLVQLSFFLHLGIGKGQRGNSGIFACTFGLIVIVIAGSLWVMHNADTNMMPT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCH
QMTIERARAKD
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]