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The map label for this gene is ydhM [C]

Identifier: 73538121

GI number: 73538121

Start: 951484

End: 952053

Strand: Reverse

Name: ydhM [C]

Synonym: Reut_B4291

Alternate gene names: 73538121

Gene position: 952053-951484 (Counterclockwise)

Preceding gene: 73538122

Following gene: 73538113

Centisome position: 34.92

GC content: 64.21

Gene sequence:

>570_bases
ATGAAAACGCAATCCGTACGCGAACAATTGCTCGAGCACACGCTGGTGCTGATTCGCCGCCGGGGGTTCAACGGTTTCAG
CTACCGCGACCTGGCCGAGCTGGTCGGGGTCAAGACATCAAGCATTCATTACTACTTTCCGTCCAAGGATGACCTGGTCC
TTGAAGCGGTACGCGAATACAGCGCGCGTACGCAGGAACGCATCCGCGCGATCGATACCAGCCTGCCTCCGCTCGAACAG
GCGCGGCAATACCTGGCGCCCCTGCATGCGGGCTCCGGCACGGACCAGGCCTGTCTGGTGGGGATGCTGTCCGCCGATGT
GCTGTCCCTGTCGGAACCTGTGCGCGCCACCATGCGAGAGTACGTGCGCATGCAAGAGCAATGGCTGACAGGCTTGTTCG
AGCGCGCCCAGCCGCTGCGCGACAAGCCCTATCCGGTGCCGCCCGCGCAACTGGCCCAGGTCGTCTATGGCTCGCTGCAG
AACGGGCTGATGGCCGCCCGGCTGTTTGGCACCGCCGAGAGGCTGGAGTCAGCCGCTGCGGTGCTGATCGGCGTCATGCC
GCAGCAGTGA

Upstream 100 bases:

>100_bases
GATGGGTGGGGCTCTGCCTCGTCAGCGGTTCACTCATCACGCTCGTCGCGCAAACGCTGCCGGCTTGACTGGCAGCAGAC
ATTGCAGAGGGGCTGAAACG

Downstream 100 bases:

>100_bases
GCTGGCGCGCCACCACCGCGCACAGCCAATCCGGGTCATCGTGCGGCAGGTCGTGGCCTGCCCACGGATGGCGGAGCAGC
GGCACGCTCCAGGCCTGCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; Inactive Regulatory Protein; TetR Family Regulatory Protein; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPSKDDLVLEAVREYSARTQERIRAIDTSLPPLEQ
ARQYLAPLHAGSGTDQACLVGMLSADVLSLSEPVRATMREYVRMQEQWLTGLFERAQPLRDKPYPVPPAQLAQVVYGSLQ
NGLMAARLFGTAERLESAAAVLIGVMPQQ

Sequences:

>Translated_189_residues
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPSKDDLVLEAVREYSARTQERIRAIDTSLPPLEQ
ARQYLAPLHAGSGTDQACLVGMLSADVLSLSEPVRATMREYVRMQEQWLTGLFERAQPLRDKPYPVPPAQLAQVVYGSLQ
NGLMAARLFGTAERLESAAAVLIGVMPQQ
>Mature_189_residues
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPSKDDLVLEAVREYSARTQERIRAIDTSLPPLEQ
ARQYLAPLHAGSGTDQACLVGMLSADVLSLSEPVRATMREYVRMQEQWLTGLFERAQPLRDKPYPVPPAQLAQVVYGSLQ
NGLMAARLFGTAERLESAAAVLIGVMPQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21192; Mature: 21192

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPSKDDLVLEAVREY
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
SARTQERIRAIDTSLPPLEQARQYLAPLHAGSGTDQACLVGMLSADVLSLSEPVRATMRE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVRMQEQWLTGLFERAQPLRDKPYPVPPAQLAQVVYGSLQNGLMAARLFGTAERLESAAA
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIGVMPQQ
HHHHCCCCC
>Mature Secondary Structure
MKTQSVREQLLEHTLVLIRRRGFNGFSYRDLAELVGVKTSSIHYYFPSKDDLVLEAVREY
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
SARTQERIRAIDTSLPPLEQARQYLAPLHAGSGTDQACLVGMLSADVLSLSEPVRATMRE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YVRMQEQWLTGLFERAQPLRDKPYPVPPAQLAQVVYGSLQNGLMAARLFGTAERLESAAA
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIGVMPQQ
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA