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The map label for this gene is omp32 [H]

Identifier: 73538002

GI number: 73538002

Start: 814841

End: 815986

Strand: Direct

Name: omp32 [H]

Synonym: Reut_B4171

Alternate gene names: 73538002

Gene position: 814841-815986 (Clockwise)

Preceding gene: 73538001

Following gene: 73538007

Centisome position: 29.89

GC content: 65.27

Gene sequence:

>1146_bases
ATGAAGAAATCGCTTTGCGCACTGGCAGCAATCCTGCTGGCCGGTGCGGCGCACGCGCAGAGCAGCGTGACGCTTTACGG
GGTCATCGACGGCTCCGTCGAGTACGTCAATCGGGTCGCATCCGCTGCGGCTACGCCCACCCAGGGTGGCAGCCGCTTTG
GCATGCCGAGCGTTGGCGGCCTGTCGGCTTCGCGCTGGGGCCTGCGTGGCGTGGAAGAGCTGGGGGCCGGAAACAAGGCC
CTCTTCGTGCTGGAAAGCGGCTTCCAATTCGATACCGGCGCGCTGCAGAGCGCCCCGCTGTTCAATCGCCAGTCGTTCGT
CGGCCTGCAGAACGGCGACTACGGCAAGGTGACCTTCGGGCGCCAGTACACCTCGTTCTTCGATGGCATGGCCAACTTCG
CGCCGCTGCGCTTCGCCGCGACCTACGAGCCGGGCATCTGGTGGATGGGCCTGAACTACCGCGAAGACAACATGATCAAG
TACACGGGCCAGTTCGGCCCGTTGCAGGCCGTCGGCCACTTTTCGTTCGGCACTGGTGTCGCCGTGCAGAATGCTGCCAT
CGTGCTGGCCAATGGCGGCGCGGGCGAGGTGCCGGGCCATTTCTCGGACAACACTGCATACGGCGGCTCGCTGATGTATC
TCGACGGCAGCGGCCTGGGCTTCTCGGTCGGTGCGGACATCTGGCGACCGGCCGCCGTCACGGGCCAGCCCGGCAAGATG
AGCAAGTACGGCGCCGCCGCGCTCTACACCACCGGGCCGTTCAAGTTCACGCTGGGCTACCGCTACAACAAGGGCGAGTT
CCCCAATGGCAACACGCTGCTGCGCGACGACTACTGGTGGGCGGGCGTGAACTATCAGGCAACGCCGGCGCTGGTCCTGT
CTATGGCCTACTACTATGCCGACGCCAAGGGCGCGCGCACGGCGGCCACGTCGCCGGAGACCAACCCGGCCAATATGCAG
CAGGTCAGCTTCATTGCCGACTACAGCTTCAGCAAGCGCACGGACGTGTACCTGTCGCTGGGCTACGCGCACAACGGCGG
CCTGAGCTTCGACGGCCTTGCCACGGCTTATGCGTTCAAGTATCCGACCATGGCAGGCCAGACGAACATGGTCGGCGTGA
CAGTGGGCGTGCGGCAGGTGTTCTGA

Upstream 100 bases:

>100_bases
GCGGCTTGTCACCGGCTTCGCAAATGCGCGAAGCCGGCTCCGGGCCCCGGCGAACGCGGGTGTCCGGACGCAATGAAGAC
ATCCCAGGAGAACATCTAGC

Downstream 100 bases:

>100_bases
CGTACAAGCGCAGGCGCAGGCGCGCAGAAAGGACGTTTATTCGATCGCCCGAAACTGCGCGCACAGCCGGAACACGTCTT
CGGACAGCGCGATCTGCTTT

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKKSLCALAAILLAGAAHAQSSVTLYGVIDGSVEYVNRVASAAATPTQGGSRFGMPSVGGLSASRWGLRGVEELGAGNKA
LFVLESGFQFDTGALQSAPLFNRQSFVGLQNGDYGKVTFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMIK
YTGQFGPLQAVGHFSFGTGVAVQNAAIVLANGGAGEVPGHFSDNTAYGGSLMYLDGSGLGFSVGADIWRPAAVTGQPGKM
SKYGAAALYTTGPFKFTLGYRYNKGEFPNGNTLLRDDYWWAGVNYQATPALVLSMAYYYADAKGARTAATSPETNPANMQ
QVSFIADYSFSKRTDVYLSLGYAHNGGLSFDGLATAYAFKYPTMAGQTNMVGVTVGVRQVF

Sequences:

>Translated_381_residues
MKKSLCALAAILLAGAAHAQSSVTLYGVIDGSVEYVNRVASAAATPTQGGSRFGMPSVGGLSASRWGLRGVEELGAGNKA
LFVLESGFQFDTGALQSAPLFNRQSFVGLQNGDYGKVTFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMIK
YTGQFGPLQAVGHFSFGTGVAVQNAAIVLANGGAGEVPGHFSDNTAYGGSLMYLDGSGLGFSVGADIWRPAAVTGQPGKM
SKYGAAALYTTGPFKFTLGYRYNKGEFPNGNTLLRDDYWWAGVNYQATPALVLSMAYYYADAKGARTAATSPETNPANMQ
QVSFIADYSFSKRTDVYLSLGYAHNGGLSFDGLATAYAFKYPTMAGQTNMVGVTVGVRQVF
>Mature_381_residues
MKKSLCALAAILLAGAAHAQSSVTLYGVIDGSVEYVNRVASAAATPTQGGSRFGMPSVGGLSASRWGLRGVEELGAGNKA
LFVLESGFQFDTGALQSAPLFNRQSFVGLQNGDYGKVTFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMIK
YTGQFGPLQAVGHFSFGTGVAVQNAAIVLANGGAGEVPGHFSDNTAYGGSLMYLDGSGLGFSVGADIWRPAAVTGQPGKM
SKYGAAALYTTGPFKFTLGYRYNKGEFPNGNTLLRDDYWWAGVNYQATPALVLSMAYYYADAKGARTAATSPETNPANMQ
QVSFIADYSFSKRTDVYLSLGYAHNGGLSFDGLATAYAFKYPTMAGQTNMVGVTVGVRQVF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40479; Mature: 40479

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLCALAAILLAGAAHAQSSVTLYGVIDGSVEYVNRVASAAATPTQGGSRFGMPSVGG
CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LSASRWGLRGVEELGAGNKALFVLESGFQFDTGALQSAPLFNRQSFVGLQNGDYGKVTFG
CCCCCCCCCCHHHHCCCCEEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCCCEEEEC
RQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMIKYTGQFGPLQAVGHFSFGTGV
CHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCE
AVQNAAIVLANGGAGEVPGHFSDNTAYGGSLMYLDGSGLGFSVGADIWRPAAVTGQPGKM
EEECEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCC
SKYGAAALYTTGPFKFTLGYRYNKGEFPNGNTLLRDDYWWAGVNYQATPALVLSMAYYYA
CCCCCEEEEECCCEEEEEEEEECCCCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHC
DAKGARTAATSPETNPANMQQVSFIADYSFSKRTDVYLSLGYAHNGGLSFDGLATAYAFK
CCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHEEEEEE
YPTMAGQTNMVGVTVGVRQVF
CCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKKSLCALAAILLAGAAHAQSSVTLYGVIDGSVEYVNRVASAAATPTQGGSRFGMPSVGG
CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LSASRWGLRGVEELGAGNKALFVLESGFQFDTGALQSAPLFNRQSFVGLQNGDYGKVTFG
CCCCCCCCCCHHHHCCCCEEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCCCEEEEC
RQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMIKYTGQFGPLQAVGHFSFGTGV
CHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCE
AVQNAAIVLANGGAGEVPGHFSDNTAYGGSLMYLDGSGLGFSVGADIWRPAAVTGQPGKM
EEECEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCC
SKYGAAALYTTGPFKFTLGYRYNKGEFPNGNTLLRDDYWWAGVNYQATPALVLSMAYYYA
CCCCCEEEEECCCEEEEEEEEECCCCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHC
DAKGARTAATSPETNPANMQQVSFIADYSFSKRTDVYLSLGYAHNGGLSFDGLATAYAFK
CCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHEEEEEE
YPTMAGQTNMVGVTVGVRQVF
CCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]