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The map label for this gene is yfdE [C]

Identifier: 73537993

GI number: 73537993

Start: 803656

End: 804021

Strand: Direct

Name: yfdE [C]

Synonym: Reut_B4162

Alternate gene names: 73537993

Gene position: 803656-804021 (Clockwise)

Preceding gene: 73537991

Following gene: 73537994

Centisome position: 29.48

GC content: 68.31

Gene sequence:

>366_bases
ATGGACGTACTGAGTGGCATCCGCGTCGTGGAATTCGAAGCTATCGGACCGGGGCCGTTTGGCGGCATGCTACTGGCCGA
CACGGGCGCCGACGTGGCGCGTATCGACCGCCCGGAACCGCCGAGCGATCTCGGTCCAAAACGAAACGGCGGCAAGCGTG
TCGATGTGACGGGCCGCGGGCGCCGCTGCGTCACGCTGGACCTGAAGCAGGCCAATGCGCAGCTGGCGGCACTGGAATTG
ATAGCGCGCGCCGATGTGGTGATCGAAGGCTTCCGCCCCGCCACCATGGAGCGCCTGGGCCTCGGCCTCGATGTCTCGCG
GACTTGTCCGCGGTGCGCGCGGGCGACTGGATCGAGGCGCGCGTGA

Upstream 100 bases:

>100_bases
ACCTGATACGGGTGGGTGTTTGCACCCCCCGAATTTGCTCTACTTGTTTCCATGATCAACGGCGCGACTGCGCCAGCGCA
GAAGGAATCAGGAGACAGTC

Downstream 100 bases:

>100_bases
CATTCGTCAAGCAGGGCAAGCACATCACCAATGGCATGTGTTGCCTGACGGTCGACGGCCGCATGGTGCTGCAGACCACT
GGTGTCTTTTCGACCCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-Methylacyl-CoA Racemase; Fatty Acid-CoA Racemase; Acyl-CoA Transferase/Carnitine Dehydratase; Formyl-CoA Transferase; CAIB/BAIF Family Protein; Racemase; CoA-Transferase Family III Family Protein; L-Carnitine Dehydratase; Acyl-CoA Transferase; CaiB/BaiF Family Protein; CoA-Transferase; Succinyl-CoA(R)-Citramalate CoA-Transferase; Fatty Acid Co-A Racemase; Fatty-Acid-CoA Racemase Far; CAIB/BAIF Family; Fatty-Acyl-CoA Racemase; Alpha-Methylacyl-CoA Racemase Mcr; Acyl-CoA Transferase/Carnitine Dehydratase Protein; L-Carnitine Dehydratase/Bile Acid-Inducible; CoA-Transferase Family III; Caib/Baif Family Protein; CoA-Transferase Family III Family; Facyl-CoA Transferase/Carnitine Dehydratase; L-Carnitine Dehydratase/Bile Acid- Inducible Protein F; CoA Transferase

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDVLSGIRVVEFEAIGPGPFGGMLLADTGADVARIDRPEPPSDLGPKRNGGKRVDVTGRGRRCVTLDLKQANAQLAALEL
IARADVVIEGFRPATMERLGLGLDVSRTCPRCARATGSRRA

Sequences:

>Translated_121_residues
MDVLSGIRVVEFEAIGPGPFGGMLLADTGADVARIDRPEPPSDLGPKRNGGKRVDVTGRGRRCVTLDLKQANAQLAALEL
IARADVVIEGFRPATMERLGLGLDVSRTCPRCARATGSRRA
>Mature_121_residues
MDVLSGIRVVEFEAIGPGPFGGMLLADTGADVARIDRPEPPSDLGPKRNGGKRVDVTGRGRRCVTLDLKQANAQLAALEL
IARADVVIEGFRPATMERLGLGLDVSRTCPRCARATGSRRA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI266456254, Length=115, Percent_Identity=43.4782608695652, Blast_Score=79, Evalue=8e-16,
Organism=Homo sapiens, GI42794625, Length=115, Percent_Identity=43.4782608695652, Blast_Score=79, Evalue=8e-16,
Organism=Homo sapiens, GI42822893, Length=115, Percent_Identity=43.4782608695652, Blast_Score=79, Evalue=9e-16,
Organism=Homo sapiens, GI266458393, Length=115, Percent_Identity=43.4782608695652, Blast_Score=79, Evalue=1e-15,
Organism=Homo sapiens, GI266458397, Length=115, Percent_Identity=43.4782608695652, Blast_Score=78, Evalue=1e-15,
Organism=Homo sapiens, GI266458395, Length=115, Percent_Identity=43.4782608695652, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082093, Length=123, Percent_Identity=32.520325203252, Blast_Score=61, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115535051, Length=99, Percent_Identity=36.3636363636364, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32564160, Length=99, Percent_Identity=37.3737373737374, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585488, Length=118, Percent_Identity=44.0677966101695, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12839; Mature: 12839

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLSGIRVVEFEAIGPGPFGGMLLADTGADVARIDRPEPPSDLGPKRNGGKRVDVTGRG
CCCCCCCEEEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCC
RRCVTLDLKQANAQLAALELIARADVVIEGFRPATMERLGLGLDVSRTCPRCARATGSRR
CEEEEEEECCCCCHHHHHHHHHHHCEEEECCCCHHHHHHCCCCCCCCCCCHHHHCCCCCC
A
C
>Mature Secondary Structure
MDVLSGIRVVEFEAIGPGPFGGMLLADTGADVARIDRPEPPSDLGPKRNGGKRVDVTGRG
CCCCCCCEEEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCC
RRCVTLDLKQANAQLAALELIARADVVIEGFRPATMERLGLGLDVSRTCPRCARATGSRR
CEEEEEEECCCCCHHHHHHHHHHHCEEEECCCCHHHHHHCCCCCCCCCCCHHHHCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA