| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is 73537906
Identifier: 73537906
GI number: 73537906
Start: 713663
End: 715333
Strand: Reverse
Name: 73537906
Synonym: Reut_B4073
Alternate gene names: NA
Gene position: 715333-713663 (Counterclockwise)
Preceding gene: 73537907
Following gene: 73537904
Centisome position: 26.24
GC content: 67.92
Gene sequence:
>1671_bases ATGACAAGACAGACCATGAACGATACTGCCCCCTCATCGTCCACTCCGCAGCCCACCCCGCAGCCCGGCCGGCGACAGTG GCTGAGCCACCTGGCCGGCGCCGCCGTGACCACGGTTGCCGCCGCGGCCATGACCAGCCGGACCGCCAGCGCCGCCCCTG CGGGCACGGCACCTGCCGCGTCCGGCCCCGGCACCGCCGGCGGTGGGACGCCAGACCCGATCGTGCTGATGCCGGCGTGG CAGCTTTCACGCGAGATCCGCGGCGGCCGCCTGTCCTGCCGCCAGGTCATGAATGCCTACCTGGCGCATATCGACCGCGT CAATCCGGTGACCAACGCCATCGTCGCGCTGCGGGATCGCGATGCCCTGATGCAGGAAGCCGCCGCTGCCGACGAGGCGT TCGCCGCGCGCAAAGTGGCGGGATGGATGCACGGCGTGCCGCAGGCGCCGAAGGATCTGGCCCTCACGCGCGGCATTCGT ACCACGTTCGGCTCGCCGATCTTCAAGGACAACGTGCCGACGTCCGACGCAATCATCGTAGAACGCGTGCGCAAATCCGG CGCGATCCTGCTCGGCAAGACCAATACGCCCGAGTTCGGCCTGGGCTCGCAGACCTTCAACCCGGTGTATGGCCCCACGC GCAATCCGTACGACAGCACGCGCACCGCGGGCGGCAGCAGCGGCGGCGCCGCGGCGGCACTGGCCATGCGTCTGCTGCCT GTGGCGGACGGCAGCGATTTCGGCGGTTCGCTGCGCAACCCGGCCGGGTTCTGCAATGTTTATGGCTTCCGTCCTTCGGC GGGACGCGTGCCCTATGGGCCCACGCCGGAAGTCTTTATCCAGCAGCTCGGCTATGAGGGCCCGATGGGCCGCACGGTCG CTGACGTGGCCTTGCTACTCGCCACCCAGGCCGGCCCCGACCCGCGCACGCCGCAGGCGCTCGCGCCAGACCCAGTGCTC GCCACGCTGACGCCGGACAACGTCATGGCCGCGCTGTCGACGAACCTGAAGGGCAAGCGCGTGGCATGGCTCGGCGACTG GGACGGCTATCTGCCGATGGAAGACGGCATCCTTCAGCTGTGCGAGCAAGCCCTGCAGGCCTTCCCGGCCTTTGGCGTCG GTGTCGACAAGATCAAGCCGCCTTTCTCACCCGAGCGCCTGTGGAAGACCTGGCTCGTGCACCGGCACTTCCTGGTCGGC AACGGCATGCTGCCGTTCTACCGCGACGAAGCCAAGCGCGCGCTGCTCAAGCCCGAAGCGATCTGGGAAATCGAAGGTGC GCTCAAGCTTAGCGGCGCGGACATCTATGCGGCCAGCGCCGACCGCAGCGCGTGGTATCAGGCTGTGGAAGGCGTCTTTG CCAAATTCGACTACATCGCCGTGCCGACCGCACAGGTCTTTCCGTTCGATGTGCGTCAACCGTGGCCCAAGGAAATCGCT GGCCGGCAAATGGATACCTACCACCGCTGGATGGAAGTCGTATTCCCGTGGACGTTGTCGGGCTGCCCGGCAATCAGCGT GCCGGTCGGCTTCGGCAAGAACGGGCTGCCGATGGGCATGCAACTCATTGGCCGTCCGCGCGATGACCTGAGCGTCTTGC GCCTGGCTCGGGCATACGAGCAGGAACGCGACTGGGTGGGCCGCCACCTGCCGCGCGCGGTGATGGCCTGA
Upstream 100 bases:
>100_bases CGGCCGCGAAATGGGCCGCGCCGTGTTCGACCACTATACCGAGACCAAATCGGTCATGATCGCCGTGTAATTGCCGCCGG CTGCCGACGGGTTTCCCACC
Downstream 100 bases:
>100_bases CGACGGAAAGACCGGTCAGCGGCGCGCGAGCGTCGCTGACGGCAGTTCGCCGAAGAACGCGCGGTACTGCGCTGCAAATC GCGGCAGATGCTGGAAGCCG
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MTRQTMNDTAPSSSTPQPTPQPGRRQWLSHLAGAAVTTVAAAAMTSRTASAAPAGTAPAASGPGTAGGGTPDPIVLMPAW QLSREIRGGRLSCRQVMNAYLAHIDRVNPVTNAIVALRDRDALMQEAAAADEAFAARKVAGWMHGVPQAPKDLALTRGIR TTFGSPIFKDNVPTSDAIIVERVRKSGAILLGKTNTPEFGLGSQTFNPVYGPTRNPYDSTRTAGGSSGGAAAALAMRLLP VADGSDFGGSLRNPAGFCNVYGFRPSAGRVPYGPTPEVFIQQLGYEGPMGRTVADVALLLATQAGPDPRTPQALAPDPVL ATLTPDNVMAALSTNLKGKRVAWLGDWDGYLPMEDGILQLCEQALQAFPAFGVGVDKIKPPFSPERLWKTWLVHRHFLVG NGMLPFYRDEAKRALLKPEAIWEIEGALKLSGADIYAASADRSAWYQAVEGVFAKFDYIAVPTAQVFPFDVRQPWPKEIA GRQMDTYHRWMEVVFPWTLSGCPAISVPVGFGKNGLPMGMQLIGRPRDDLSVLRLARAYEQERDWVGRHLPRAVMA
Sequences:
>Translated_556_residues MTRQTMNDTAPSSSTPQPTPQPGRRQWLSHLAGAAVTTVAAAAMTSRTASAAPAGTAPAASGPGTAGGGTPDPIVLMPAW QLSREIRGGRLSCRQVMNAYLAHIDRVNPVTNAIVALRDRDALMQEAAAADEAFAARKVAGWMHGVPQAPKDLALTRGIR TTFGSPIFKDNVPTSDAIIVERVRKSGAILLGKTNTPEFGLGSQTFNPVYGPTRNPYDSTRTAGGSSGGAAAALAMRLLP VADGSDFGGSLRNPAGFCNVYGFRPSAGRVPYGPTPEVFIQQLGYEGPMGRTVADVALLLATQAGPDPRTPQALAPDPVL ATLTPDNVMAALSTNLKGKRVAWLGDWDGYLPMEDGILQLCEQALQAFPAFGVGVDKIKPPFSPERLWKTWLVHRHFLVG NGMLPFYRDEAKRALLKPEAIWEIEGALKLSGADIYAASADRSAWYQAVEGVFAKFDYIAVPTAQVFPFDVRQPWPKEIA GRQMDTYHRWMEVVFPWTLSGCPAISVPVGFGKNGLPMGMQLIGRPRDDLSVLRLARAYEQERDWVGRHLPRAVMA >Mature_555_residues TRQTMNDTAPSSSTPQPTPQPGRRQWLSHLAGAAVTTVAAAAMTSRTASAAPAGTAPAASGPGTAGGGTPDPIVLMPAWQ LSREIRGGRLSCRQVMNAYLAHIDRVNPVTNAIVALRDRDALMQEAAAADEAFAARKVAGWMHGVPQAPKDLALTRGIRT TFGSPIFKDNVPTSDAIIVERVRKSGAILLGKTNTPEFGLGSQTFNPVYGPTRNPYDSTRTAGGSSGGAAAALAMRLLPV ADGSDFGGSLRNPAGFCNVYGFRPSAGRVPYGPTPEVFIQQLGYEGPMGRTVADVALLLATQAGPDPRTPQALAPDPVLA TLTPDNVMAALSTNLKGKRVAWLGDWDGYLPMEDGILQLCEQALQAFPAFGVGVDKIKPPFSPERLWKTWLVHRHFLVGN GMLPFYRDEAKRALLKPEAIWEIEGALKLSGADIYAASADRSAWYQAVEGVFAKFDYIAVPTAQVFPFDVRQPWPKEIAG RQMDTYHRWMEVVFPWTLSGCPAISVPVGFGKNGLPMGMQLIGRPRDDLSVLRLARAYEQERDWVGRHLPRAVMA
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI195972892, Length=249, Percent_Identity=35.7429718875502, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI222831590, Length=250, Percent_Identity=31.2, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI166795287, Length=188, Percent_Identity=27.6595744680851, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17537465, Length=255, Percent_Identity=31.7647058823529, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17538252, Length=197, Percent_Identity=35.5329949238579, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17556264, Length=304, Percent_Identity=28.6184210526316, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17543272, Length=171, Percent_Identity=32.1637426900585, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71990152, Length=159, Percent_Identity=34.5911949685535, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17556276, Length=354, Percent_Identity=26.271186440678, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17556278, Length=354, Percent_Identity=26.271186440678, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17538254, Length=204, Percent_Identity=30.8823529411765, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6319685, Length=448, Percent_Identity=27.0089285714286, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6323950, Length=177, Percent_Identity=33.8983050847458, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320448, Length=231, Percent_Identity=25.5411255411255, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644968, Length=518, Percent_Identity=26.0617760617761, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI45550774, Length=254, Percent_Identity=34.6456692913386, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI24648435, Length=257, Percent_Identity=34.2412451361868, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI24648437, Length=257, Percent_Identity=34.2412451361868, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI24648113, Length=234, Percent_Identity=38.4615384615385, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI21356731, Length=535, Percent_Identity=26.5420560747664, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI161078093, Length=510, Percent_Identity=23.5294117647059, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24652985, Length=257, Percent_Identity=34.6303501945525, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI19922090, Length=257, Percent_Identity=34.6303501945525, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24652981, Length=257, Percent_Identity=34.6303501945525, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24652983, Length=257, Percent_Identity=34.6303501945525, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24648441, Length=179, Percent_Identity=36.8715083798883, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI24648439, Length=179, Percent_Identity=36.8715083798883, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 59734; Mature: 59603
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00571 AMIDASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQTMNDTAPSSSTPQPTPQPGRRQWLSHLAGAAVTTVAAAAMTSRTASAAPAGTAPAA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SGPGTAGGGTPDPIVLMPAWQLSREIRGGRLSCRQVMNAYLAHIDRVNPVTNAIVALRDR CCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DALMQEAAAADEAFAARKVAGWMHGVPQAPKDLALTRGIRTTFGSPIFKDNVPTSDAIIV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ERVRKSGAILLGKTNTPEFGLGSQTFNPVYGPTRNPYDSTRTAGGSSGGAAAALAMRLLP HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC VADGSDFGGSLRNPAGFCNVYGFRPSAGRVPYGPTPEVFIQQLGYEGPMGRTVADVALLL CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH ATQAGPDPRTPQALAPDPVLATLTPDNVMAALSTNLKGKRVAWLGDWDGYLPMEDGILQL HHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH CEQALQAFPAFGVGVDKIKPPFSPERLWKTWLVHRHFLVGNGMLPFYRDEAKRALLKPEA HHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH IWEIEGALKLSGADIYAASADRSAWYQAVEGVFAKFDYIAVPTAQVFPFDVRQPWPKEIA HEEECCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHH GRQMDTYHRWMEVVFPWTLSGCPAISVPVGFGKNGLPMGMQLIGRPRDDLSVLRLARAYE CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH QERDWVGRHLPRAVMA HHHHHHHHHCHHHHCC >Mature Secondary Structure TRQTMNDTAPSSSTPQPTPQPGRRQWLSHLAGAAVTTVAAAAMTSRTASAAPAGTAPAA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SGPGTAGGGTPDPIVLMPAWQLSREIRGGRLSCRQVMNAYLAHIDRVNPVTNAIVALRDR CCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DALMQEAAAADEAFAARKVAGWMHGVPQAPKDLALTRGIRTTFGSPIFKDNVPTSDAIIV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ERVRKSGAILLGKTNTPEFGLGSQTFNPVYGPTRNPYDSTRTAGGSSGGAAAALAMRLLP HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC VADGSDFGGSLRNPAGFCNVYGFRPSAGRVPYGPTPEVFIQQLGYEGPMGRTVADVALLL CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH ATQAGPDPRTPQALAPDPVLATLTPDNVMAALSTNLKGKRVAWLGDWDGYLPMEDGILQL HHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH CEQALQAFPAFGVGVDKIKPPFSPERLWKTWLVHRHFLVGNGMLPFYRDEAKRALLKPEA HHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH IWEIEGALKLSGADIYAASADRSAWYQAVEGVFAKFDYIAVPTAQVFPFDVRQPWPKEIA HEEECCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHH GRQMDTYHRWMEVVFPWTLSGCPAISVPVGFGKNGLPMGMQLIGRPRDDLSVLRLARAYE CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH QERDWVGRHLPRAVMA HHHHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]