Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is hexR [H]
Identifier: 73537854
GI number: 73537854
Start: 661336
End: 662256
Strand: Reverse
Name: hexR [H]
Synonym: Reut_B4021
Alternate gene names: 73537854
Gene position: 662256-661336 (Counterclockwise)
Preceding gene: 73537858
Following gene: 73537853
Centisome position: 24.29
GC content: 69.49
Gene sequence:
>921_bases ATGACCGCGCCTTTCGATATCCTGACCCGCATCGCCGAGCGCGGCCCCGCGTTGCGCCTGGCCGAGCAGAAAGTGGCGCA GGTGGTACTGGAAGACCTGGCCGGCGCAGCAGCAGCCAGCATCAATGAACTGGCGCGCAAGGCCGGCGTGAGCGAAGCGA GCGTGACGCGCTTTGCCAAGGCCATCGGCTGCCGCGACGTGCGCGACCTCAAGCTGCGGTTAGCGCAAGCGACTGCGGTT GGCATGCGCTTCCTTGACCCCGATGGCGTGCCGGCACCCGCCGATGCCCCCGCCACCGTGGCGGACCGCATCCATGCCGA CGTGCTCACCGCGCTCGAGGTCAATCGCAAGCTCATCGACACCGACCGCATGGAACAGGCTGCGCGCCTGTTGCTCGGCG CACGCATGGTCTACGCTTTTGGCATGGGCGGCGGCTCGTCGATCATGGCCGACGAAGCGCGCCACCGCCTGGCGCGTCTG GGGCAACCCGTGGCCAGCTACCAGGACGGGCTGCTGCAGAAGATGGTGGCCGCGACGCTCAGCCGCGACGACGTGGTGCT CGCGTTTTCGGCCAGCGGCAGCGTGCCGGAGATGCTGGCGAGCTGCGATATCGCGCGCGAATACGGCGCGAAGCTGGTGG CCGTGACCGCGCTCGGTTCGCCGCTGGCTGCGCGTGCCGACGTGCTGCTGCCGGTGCGCACGCTCGAGACCGACTTCATT TTCAAGCCGTCGGCCTCGCGCTACGCGATGCTGCTGGTGCTCGATGTCCTGGCCACGCAATGCGCGCTGCTGCAGCAGGA CCAGAGCAAGGAACGGCTGCGCCGCCTGAAATATGTGCTCGACGCCCACCGCGGTCCCGCTGGTGAGCGCGGCCCGGACA GCGGCGCCGGCCCGGACGGCCGCCAGCCGCTGGGAGACTGA
Upstream 100 bases:
>100_bases GAGCGACAACCGGATGCGATCAGCGCCCCGCTGCGGCAACGCGACAGGGCCGGCATTACCAGTTATAGCCCTTCGCCAGC CCACGGACCCTCCCTCAGCC
Downstream 100 bases:
>100_bases CCTATGCCACACCTGTTTGATACCCTGATCCGCTGCGTCATGCTGATCGACGGCTCGGGCGCCGCGGCGCGCATGGCCGA CGTGGCGCTGCGCGATGGCC
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Hex regulon repressor [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTAPFDILTRIAERGPALRLAEQKVAQVVLEDLAGAAAASINELARKAGVSEASVTRFAKAIGCRDVRDLKLRLAQATAV GMRFLDPDGVPAPADAPATVADRIHADVLTALEVNRKLIDTDRMEQAARLLLGARMVYAFGMGGGSSIMADEARHRLARL GQPVASYQDGLLQKMVAATLSRDDVVLAFSASGSVPEMLASCDIAREYGAKLVAVTALGSPLAARADVLLPVRTLETDFI FKPSASRYAMLLVLDVLATQCALLQQDQSKERLRRLKYVLDAHRGPAGERGPDSGAGPDGRQPLGD
Sequences:
>Translated_306_residues MTAPFDILTRIAERGPALRLAEQKVAQVVLEDLAGAAAASINELARKAGVSEASVTRFAKAIGCRDVRDLKLRLAQATAV GMRFLDPDGVPAPADAPATVADRIHADVLTALEVNRKLIDTDRMEQAARLLLGARMVYAFGMGGGSSIMADEARHRLARL GQPVASYQDGLLQKMVAATLSRDDVVLAFSASGSVPEMLASCDIAREYGAKLVAVTALGSPLAARADVLLPVRTLETDFI FKPSASRYAMLLVLDVLATQCALLQQDQSKERLRRLKYVLDAHRGPAGERGPDSGAGPDGRQPLGD >Mature_305_residues TAPFDILTRIAERGPALRLAEQKVAQVVLEDLAGAAAASINELARKAGVSEASVTRFAKAIGCRDVRDLKLRLAQATAVG MRFLDPDGVPAPADAPATVADRIHADVLTALEVNRKLIDTDRMEQAARLLLGARMVYAFGMGGGSSIMADEARHRLARLG QPVASYQDGLLQKMVAATLSRDDVVLAFSASGSVPEMLASCDIAREYGAKLVAVTALGSPLAARADVLLPVRTLETDFIF KPSASRYAMLLVLDVLATQCALLQQDQSKERLRRLKYVLDAHRGPAGERGPDSGAGPDGRQPLGD
Specific function: Represses the expression of the hex regulon (zwf, eda, glp and gap) [H]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788159, Length=279, Percent_Identity=30.8243727598566, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI87082369, Length=261, Percent_Identity=25.6704980842912, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788767, Length=256, Percent_Identity=26.5625, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 32510; Mature: 32379
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS51071 HTH_RPIR ; PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPFDILTRIAERGPALRLAEQKVAQVVLEDLAGAAAASINELARKAGVSEASVTRFAK CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIGCRDVRDLKLRLAQATAVGMRFLDPDGVPAPADAPATVADRIHADVLTALEVNRKLID HHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TDRMEQAARLLLGARMVYAFGMGGGSSIMADEARHRLARLGQPVASYQDGLLQKMVAATL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC SRDDVVLAFSASGSVPEMLASCDIAREYGAKLVAVTALGSPLAARADVLLPVRTLETDFI CCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHCHHEEEHHHHCCCEE FKPSASRYAMLLVLDVLATQCALLQQDQSKERLRRLKYVLDAHRGPAGERGPDSGAGPDG ECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RQPLGD CCCCCC >Mature Secondary Structure TAPFDILTRIAERGPALRLAEQKVAQVVLEDLAGAAAASINELARKAGVSEASVTRFAK CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIGCRDVRDLKLRLAQATAVGMRFLDPDGVPAPADAPATVADRIHADVLTALEVNRKLID HHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TDRMEQAARLLLGARMVYAFGMGGGSSIMADEARHRLARLGQPVASYQDGLLQKMVAATL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC SRDDVVLAFSASGSVPEMLASCDIAREYGAKLVAVTALGSPLAARADVLLPVRTLETDFI CCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHCHHEEEHHHHCCCEE FKPSASRYAMLLVLDVLATQCALLQQDQSKERLRRLKYVLDAHRGPAGERGPDSGAGPDG ECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RQPLGD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]