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The map label for this gene is ynbD [H]

Identifier: 73537846

GI number: 73537846

Start: 653166

End: 654560

Strand: Direct

Name: ynbD [H]

Synonym: Reut_B4013

Alternate gene names: 73537846

Gene position: 653166-654560 (Clockwise)

Preceding gene: 73537845

Following gene: 73537847

Centisome position: 23.96

GC content: 65.73

Gene sequence:

>1395_bases
ATGCAGCGCGACGGCGCAGCGTATGGCTCTGCCACGCTGGGTGGGAATCCGGCACCGGGCCGGCCATGGCGGCTGGCTCT
GGGGCTGCTCGCCATCATGGGTGCGCTATTCTTTTCCTCCTACGGCCTGGCGAACTGGCTGGCCAGCCAGCGTGCAGACG
TGCCGTATTTCCACTTCGGCTGGGAGCGCGGCATTCCGTTCGTGCCGTGGTCCATCGTGCCGTACTGGTCGATCGACCTG
TTGTATGGCATCTCGTTTTTCCTGTGGGCGACCCGCGCGGACCTGCTTGCCCACGTGAAGCGCTTGCTGGCGGCGCAGGT
TATCTCCGTTGCATGCTTTATCGCGTTTCCACTGCGCTTTGCATTTGCGCGTCCCCCCGCGGAGGGGCTGCCGGGGCAGC
TTTTCACGCTGCTTGGCGGCTTCGACAAGCCCTTCAACCAGGCGCCGTCGCTCCATATCAGCCTGCTGGTGATTCTCTGG
GTCGCGTATGCCGCGCATCTGCGCGGCGTGTGGCGTTGGTTGTTGCATATCTGGTTTGCACTGATCGGCGTCTCCGTCCT
GACGACGTACCAGCATCATTTCATCGATATTCCGACGGGCTGGCTGGTCGGGTGGTTATGCGTGTTTGCTTTTCCCATGG
CGCTCCCGAGGCCGGCGGTTGGACCGGATGCAAGCACGCCTGATCCCAGGCTTGCGCGGAGCTACGCATTGGCGGCGGGA
CTGCTGGGGCTGGCATGCGTCGCGGTTGTGTCCGTTTCCGTCTTGGCTGCTTTCCTGCTGACGTCGGCGGCTATCTCGCT
GGGCTGCGTTGCCATGATTTACCGTGCCGGCAAGCCGGGCGCGTTTCAGAAGCGTGCTGACGGAACCCTGTCCATGGCGG
CGTGGTGGGTGCTGTGGCCGTATCTGCTCGGCGCTTTCGCCAACTCGCGCTGGTGGACACGGCGCCAGCCCGCCGTCAGC
CGGCTCACCGATGGCGTCTGGATCGGTCGCCTCCCCGCCGAAGTCGAACTGCGCGAGTCCGGCGCGGATGCCGTGCTCGA
CCTGACCGCGGAACTGCCGCGGCTCGTGACGGGCGTGCTCTACCGCTGCGTTCCCGTGCTGGATTTGACCGTGCCATCGC
AAACGCAGATTCGCGCCGGTGTCGAGGTCATCGAACGCTGGCAGCAGGACGGGCGCACGGTGCTGGTCAGCTGCGCCCTT
GGCTACTCGCGCAGCGCGCTGATCGCGGCTGCGTGGCTGGGCTTGCATGCACGTTTGCGCGACCCGCAGCAGGTGCTGGC
GCTGTTGCGGCAAAGCCGTCCCGCCGTGGTGCTCGGGCCGCAAAGCGTCGATGCATTGGCGCACTACCTGCAAGCCTCCG
TTGCCGATCCGCAAGGAGCCGCCCATGCCGACTGA

Upstream 100 bases:

>100_bases
AACTCGTGCGCCACGCCGGTTTCGAAAAGCTCGCGCAGCGCATCGACCCGTGGGGCATCTTCACGGTCAGCCTGGCGCGC
CGGAAAGGCGAGGGCGCCTG

Downstream 100 bases:

>100_bases
AGCTCATCCACTTCCCGCCAGCGATGCCTGGGTGGCGCGCATTGCCGCCGGCGCCATGCACGCTGCCGCCCGGCTCAATG
GTGCCGGGCTGGTTCTGGCA

Product: dual specificity protein phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MQRDGAAYGSATLGGNPAPGRPWRLALGLLAIMGALFFSSYGLANWLASQRADVPYFHFGWERGIPFVPWSIVPYWSIDL
LYGISFFLWATRADLLAHVKRLLAAQVISVACFIAFPLRFAFARPPAEGLPGQLFTLLGGFDKPFNQAPSLHISLLVILW
VAYAAHLRGVWRWLLHIWFALIGVSVLTTYQHHFIDIPTGWLVGWLCVFAFPMALPRPAVGPDASTPDPRLARSYALAAG
LLGLACVAVVSVSVLAAFLLTSAAISLGCVAMIYRAGKPGAFQKRADGTLSMAAWWVLWPYLLGAFANSRWWTRRQPAVS
RLTDGVWIGRLPAEVELRESGADAVLDLTAELPRLVTGVLYRCVPVLDLTVPSQTQIRAGVEVIERWQQDGRTVLVSCAL
GYSRSALIAAAWLGLHARLRDPQQVLALLRQSRPAVVLGPQSVDALAHYLQASVADPQGAAHAD

Sequences:

>Translated_464_residues
MQRDGAAYGSATLGGNPAPGRPWRLALGLLAIMGALFFSSYGLANWLASQRADVPYFHFGWERGIPFVPWSIVPYWSIDL
LYGISFFLWATRADLLAHVKRLLAAQVISVACFIAFPLRFAFARPPAEGLPGQLFTLLGGFDKPFNQAPSLHISLLVILW
VAYAAHLRGVWRWLLHIWFALIGVSVLTTYQHHFIDIPTGWLVGWLCVFAFPMALPRPAVGPDASTPDPRLARSYALAAG
LLGLACVAVVSVSVLAAFLLTSAAISLGCVAMIYRAGKPGAFQKRADGTLSMAAWWVLWPYLLGAFANSRWWTRRQPAVS
RLTDGVWIGRLPAEVELRESGADAVLDLTAELPRLVTGVLYRCVPVLDLTVPSQTQIRAGVEVIERWQQDGRTVLVSCAL
GYSRSALIAAAWLGLHARLRDPQQVLALLRQSRPAVVLGPQSVDALAHYLQASVADPQGAAHAD
>Mature_464_residues
MQRDGAAYGSATLGGNPAPGRPWRLALGLLAIMGALFFSSYGLANWLASQRADVPYFHFGWERGIPFVPWSIVPYWSIDL
LYGISFFLWATRADLLAHVKRLLAAQVISVACFIAFPLRFAFARPPAEGLPGQLFTLLGGFDKPFNQAPSLHISLLVILW
VAYAAHLRGVWRWLLHIWFALIGVSVLTTYQHHFIDIPTGWLVGWLCVFAFPMALPRPAVGPDASTPDPRLARSYALAAG
LLGLACVAVVSVSVLAAFLLTSAAISLGCVAMIYRAGKPGAFQKRADGTLSMAAWWVLWPYLLGAFANSRWWTRRQPAVS
RLTDGVWIGRLPAEVELRESGADAVLDLTAELPRLVTGVLYRCVPVLDLTVPSQTQIRAGVEVIERWQQDGRTVLVSCAL
GYSRSALIAAAWLGLHARLRDPQQVLALLRQSRPAVVLGPQSVDALAHYLQASVADPQGAAHAD

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein-tyrosine phosphatase family [H]

Homologues:

Organism=Escherichia coli, GI1787679, Length=395, Percent_Identity=37.9746835443038, Blast_Score=255, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR000340
- InterPro:   IPR020422
- InterPro:   IPR000326
- InterPro:   IPR016130 [H]

Pfam domain/function: PF00782 DSPc; PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 50588; Mature: 50588

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50056 TYR_PHOSPHATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRDGAAYGSATLGGNPAPGRPWRLALGLLAIMGALFFSSYGLANWLASQRADVPYFHFG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECC
WERGIPFVPWSIVPYWSIDLLYGISFFLWATRADLLAHVKRLLAAQVISVACFIAFPLRF
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFARPPAEGLPGQLFTLLGGFDKPFNQAPSLHISLLVILWVAYAAHLRGVWRWLLHIWFA
HHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGVSVLTTYQHHFIDIPTGWLVGWLCVFAFPMALPRPAVGPDASTPDPRLARSYALAAG
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LLGLACVAVVSVSVLAAFLLTSAAISLGCVAMIYRAGKPGAFQKRADGTLSMAAWWVLWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHH
YLLGAFANSRWWTRRQPAVSRLTDGVWIGRLPAEVELRESGADAVLDLTAELPRLVTGVL
HHHHHHHCCCCCCCCCHHHHHHHCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
YRCVPVLDLTVPSQTQIRAGVEVIERWQQDGRTVLVSCALGYSRSALIAAAWLGLHARLR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHHHHHHHCC
DPQQVLALLRQSRPAVVLGPQSVDALAHYLQASVADPQGAAHAD
CHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQRDGAAYGSATLGGNPAPGRPWRLALGLLAIMGALFFSSYGLANWLASQRADVPYFHFG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECC
WERGIPFVPWSIVPYWSIDLLYGISFFLWATRADLLAHVKRLLAAQVISVACFIAFPLRF
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFARPPAEGLPGQLFTLLGGFDKPFNQAPSLHISLLVILWVAYAAHLRGVWRWLLHIWFA
HHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGVSVLTTYQHHFIDIPTGWLVGWLCVFAFPMALPRPAVGPDASTPDPRLARSYALAAG
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LLGLACVAVVSVSVLAAFLLTSAAISLGCVAMIYRAGKPGAFQKRADGTLSMAAWWVLWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHH
YLLGAFANSRWWTRRQPAVSRLTDGVWIGRLPAEVELRESGADAVLDLTAELPRLVTGVL
HHHHHHHCCCCCCCCCHHHHHHHCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
YRCVPVLDLTVPSQTQIRAGVEVIERWQQDGRTVLVSCALGYSRSALIAAAWLGLHARLR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHHHHHHHCC
DPQQVLALLRQSRPAVVLGPQSVDALAHYLQASVADPQGAAHAD
CHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]