Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is dipZ [H]
Identifier: 73537742
GI number: 73537742
Start: 539278
End: 541074
Strand: Reverse
Name: dipZ [H]
Synonym: Reut_B3908
Alternate gene names: 73537742
Gene position: 541074-539278 (Counterclockwise)
Preceding gene: 73537747
Following gene: 73537741
Centisome position: 19.85
GC content: 69.45
Gene sequence:
>1797_bases ATGACCTTGCTGATCCTCGCCTACCTGGGCGGTGCCCTGACCATCCTGAGTCCATGCATCCTGCCCGTCTTGCCCTTTGT CCTGAGCCGCACGGGGCAGCCGTTCCTGCGCGGCCGGCTGCCGATGCTGGCCGGGATGGCGCTGACCTTCGCCGTAGTCG CGTCGCTGGCGTCCGCCGGCGGCGCCTGGGCCGTGCGCGCCAATGCCTACGGCCGCATCGGTGCGCTGGCGCTGCTGGCC TTGTTCGGGCTCTCGCTGCTCTTGCCCAAGGTGGCGGACACGCTCGCCCGCCCGGCCGTGGCGCTCGGCAACCGGCTGGC AGGCCGCGCCGGGTCGAATGGCGAGGCATCGGCTTCACCGTGGGGCTCGCTGCTGCTCGGCATCGCCACCGGCATGCTGT GGGCGCCTTGCGCGGGGCCGATCCTGGGTCTCGTGCTCACTGGCGCCGCGCTGAACGGCGCCAGCGTATCAACGTCGCTG GCGCTCGCGGCCTATGCCGCCGGTGCGGCGACGTCGCTCGCGGCCGCGCTTGGCCTCGGCGGCCGGGTTTTCGCGGCCAT GAAGCGGAGCCTGGGCGCCAGCGAATGGCTGCGCCGCGGTCTGGGCGCAGGCGTGCTCGGGAGCGTGGTGATCATCGGGC TGGGCGCCGACACCGGCCTGCTGGCGCGATGGTCCGCCAGCGGCCCGGCGCGTCTTGAGCAGGCACTGGTTGACGCGCTG CACAAGGACCGCCCGGCGCCGCAGGCGGCCAATGAAGTACCGGCTCCCGGCAACGGCATGCTGCTGGCCGCCAACGACAC GCGCGTCGGTTTCCCGACTCCCCTGCCGGCCCTCCCTGTAGAAGGCCGGTTACCCGCCCTCGACGGCGCGGTGCAATGGC TCAACTCGCCGCCGCTGTCGCGCGAGCAGCTGCAGGGCAAGGTCACGCTGGTCTACTTCTGGACCTATTCCTGCATCAAC TGCATTCGTACCCTGCCCTACCTTCGTGCGTGGGCGGACAAGTACAAGGATCAGGGCCTGACCGTCGTCGGTGTGCATAC GCCCGAGTTCGCGTTCGAAAGATCGACGGATAACGTCCGGCGCGCGGTGGCGGACTTCCGCATTGGCTTTCCCGTGGCCG TCGACAGCGACTACCGCATCTGGCGCGCGTTCCACAACAGCTACTGGCCCGCCGCGTACTTTGTCGATGCGCGCGGCAAT ATCCGCCACCACCAGTTCGGCGAGGGCGATTACGCGAAATCCGAACGCGTCATCCAGACGCTGCTGACGGAAGCCGGTAG CCGTGCGGTGGCCGGCGATGTCGTCTCCCCCGATGCCGCCGGTGCACAGGCGGCGCCGGACCTGCACAACGTGCGCTCCG AAGAAACCTATATCGGCTACAGCCAGGCAACGAACTTCGCCTCGCCGGGCGAGGTGCGGCCCGACGCTTCTCGGCAGTAC ACCGTTGGCAAGCTGCTCCTGAACGAGTGGGGCTTGTCGGGCCAATGGACGGTCGGCCCCGAGCAGGCGACGCTGGATCG GGCCGACGGCACCATCCGCTACCGCTTCCATGCACGCGACCTGCATCTGGTACTGGGGCCGGCAGCCAATGGCCAGGCCG TCCGCTTCGTCGTGACGATCGACGGCAAGCCGCCGGGCAAGAGCCATGGTGCCGACACGGACGCCGGCGGCAATGGCGCC GTCACGCAGACGCGGCTCTACCAGCTTGTGCGGCAGGCTGGCGAAGTCGGGGAGCATACGTTCGAGATCCGCTTCCTGGA CGCTGGCGCGCAGGCCTACGCCTTCACTTTCGGCTAG
Upstream 100 bases:
>100_bases GGCCAGGGCTGCACAAAGCGGTACAAAACCGCCGGTTGGCGACACATGCCGGCCACGCGAAGGGAGTCTGATTGGGCCAA GCCAACAAACGGACCGCATC
Downstream 100 bases:
>100_bases CCGCCGGGCCGCTCAGCAGCTGATTCGCCAACGGAATCCACGCAATCCGCAGCCACGAATCGCCGCTTCGGTGCCGACCT GCAACGGTCTGGCCACGAAA
Product: cytochrome c biogenesis protein, transmembrane region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MTLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAGGAWAVRANAYGRIGALALLA LFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASPWGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSL ALAAYAAGAATSLAAALGLGGRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLSREQLQGKVTLVYFWTYSCIN CIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVRRAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGN IRHHQFGEGDYAKSERVIQTLLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTIDGKPPGKSHGADTDAGGNGA VTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG
Sequences:
>Translated_598_residues MTLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAGGAWAVRANAYGRIGALALLA LFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASPWGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSL ALAAYAAGAATSLAAALGLGGRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLSREQLQGKVTLVYFWTYSCIN CIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVRRAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGN IRHHQFGEGDYAKSERVIQTLLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTIDGKPPGKSHGADTDAGGNGA VTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG >Mature_597_residues TLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAGGAWAVRANAYGRIGALALLAL FGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASPWGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSLA LAAYAAGAATSLAAALGLGGRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDALH KDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLSREQLQGKVTLVYFWTYSCINC IRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVRRAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGNI RHHQFGEGDYAKSERVIQTLLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQYT VGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTIDGKPPGKSHGADTDAGGNGAV TQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=133, Percent_Identity=36.8421052631579, Blast_Score=99, Evalue=9e-21, Organism=Drosophila melanogaster, GI116007528, Length=125, Percent_Identity=36, Blast_Score=86, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 62837; Mature: 62706
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAG CEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC GAWAVRANAYGRIGALALLALFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASP CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCH WGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSLALAAYAAGAATSLAAALGLG HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL HHHHHHHHHHCCHHHHHHHCCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLS HCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC REQLQGKVTLVYFWTYSCINCIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVR HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCHHHHH RAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGNIRHHQFGEGDYAKSERVIQT HHHHHHHCCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH LLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY HHHHCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEHHHCCCCCCCCCCCCCCCCCH TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTI HHHHHHHHHCCCCCEEECCCCHHHHCCCCCEEEEEEEECEEEEEECCCCCCCEEEEEEEE DGKPPGKSHGADTDAGGNGAVTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECC >Mature Secondary Structure TLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAG EEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC GAWAVRANAYGRIGALALLALFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASP CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCH WGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSLALAAYAAGAATSLAAALGLG HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL HHHHHHHHHHCCHHHHHHHCCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLS HCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC REQLQGKVTLVYFWTYSCINCIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVR HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCHHHHH RAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGNIRHHQFGEGDYAKSERVIQT HHHHHHHCCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH LLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY HHHHCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEHHHCCCCCCCCCCCCCCCCCH TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTI HHHHHHHHHCCCCCEEECCCCHHHHCCCCCEEEEEEEECEEEEEECCCCCCCEEEEEEEE DGKPPGKSHGADTDAGGNGAVTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]