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The map label for this gene is kipR [H]

Identifier: 73537723

GI number: 73537723

Start: 511539

End: 512357

Strand: Reverse

Name: kipR [H]

Synonym: Reut_B3889

Alternate gene names: 73537723

Gene position: 512357-511539 (Counterclockwise)

Preceding gene: 73537724

Following gene: 73537722

Centisome position: 18.79

GC content: 70.82

Gene sequence:

>819_bases
GTGACCACTCCGAGCACCTCGCTGCAGAAGGCCTGCCGCCTGCTGCGCGCGCTGACCGATGCCCGCAACAGCCGCCTGAC
CGACCTCGCCAACGCCGCCGGGGTCGACAAAGCGTCGGCGCTGCGCCTGCTCGAAACGCTGGTGGCAGAAGGGATGGTGC
AACGCGACGCGGCGACTAAGGCGTTCATGCCCGGCCCGGAGTGGCTGACCCTGCACGCCACCACCGTGCATCGCACCGAC
TTGCGCCCGCTGGTCCGCCCCGCGCTGATCCGGCTGGCCAATGCGTTCCAGGACAGCGCCATCCTGTCCGTGCCCAGCGG
CTGCGAGTCGGTCTGTATCGAATTGCGCCTGGGCACGTTCCCGATCCGCGCGAACTACCTGGACATCGGCAGCCGCCGGC
CGCTCGGCATCGGCGCGGGCAGCCTGGCGCTGCTCTCCGCGCTGCCCGACGCGGAGGTAGAGGCCGTGATCGAAGGCATT
GCCCCGGCCATGCGCCGCTATCCACGCTTCAGCAAATCCATGCTGCTCGGCCACGTGCAAGCCACGCGCGAGCGCGGCTA
CGCAGTGCTGCTGGACGTGGTGGTCGAGCGCATGGGCGGCATCGCCATCGCGTTGCCCGGCCCGGACGGCTACCCGCTAG
GTGCGATCAGCATCGCCGCGCTCAACGAACGCATCACCGAGCGCGAAGCCGCAATGGCGCGTGCGCTGCGGCGCGAGGCC
GATGCCATCTGCCAGAACTGGCGCCCGCGCAGCGGCGCCACCCCCGACACCGAACAAGAACGGCCGGCGGCCCGGCCACG
CACGCGAGAGGAGGCATGA

Upstream 100 bases:

>100_bases
CAAAATTTTTTCGCGTCGCAGGATGACGGGCATTCTCTGATGGCCTATAACCGCTCCTACAGGTTTCAAGCGACGAAAAC
CTGACAAGGAGACAACCGGC

Downstream 100 bases:

>100_bases
CATGCGCTGGAAGCAACGTCCGCAGGGTTCCAACTGGGGCGATTTCGGGCCCGACGACCAGCTCGGCCGCATCAACCTGA
TCGGCCCCGAGCAGGTCGTG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTTPSTSLQKACRLLRALTDARNSRLTDLANAAGVDKASALRLLETLVAEGMVQRDAATKAFMPGPEWLTLHATTVHRTD
LRPLVRPALIRLANAFQDSAILSVPSGCESVCIELRLGTFPIRANYLDIGSRRPLGIGAGSLALLSALPDAEVEAVIEGI
APAMRRYPRFSKSMLLGHVQATRERGYAVLLDVVVERMGGIAIALPGPDGYPLGAISIAALNERITEREAAMARALRREA
DAICQNWRPRSGATPDTEQERPAARPRTREEA

Sequences:

>Translated_272_residues
MTTPSTSLQKACRLLRALTDARNSRLTDLANAAGVDKASALRLLETLVAEGMVQRDAATKAFMPGPEWLTLHATTVHRTD
LRPLVRPALIRLANAFQDSAILSVPSGCESVCIELRLGTFPIRANYLDIGSRRPLGIGAGSLALLSALPDAEVEAVIEGI
APAMRRYPRFSKSMLLGHVQATRERGYAVLLDVVVERMGGIAIALPGPDGYPLGAISIAALNERITEREAAMARALRREA
DAICQNWRPRSGATPDTEQERPAARPRTREEA
>Mature_271_residues
TTPSTSLQKACRLLRALTDARNSRLTDLANAAGVDKASALRLLETLVAEGMVQRDAATKAFMPGPEWLTLHATTVHRTDL
RPLVRPALIRLANAFQDSAILSVPSGCESVCIELRLGTFPIRANYLDIGSRRPLGIGAGSLALLSALPDAEVEAVIEGIA
PAMRRYPRFSKSMLLGHVQATRERGYAVLLDVVVERMGGIAIALPGPDGYPLGAISIAALNERITEREAAMARALRREAD
AICQNWRPRSGATPDTEQERPAARPRTREEA

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29379; Mature: 29248

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPSTSLQKACRLLRALTDARNSRLTDLANAAGVDKASALRLLETLVAEGMVQRDAATK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFMPGPEWLTLHATTVHRTDLRPLVRPALIRLANAFQDSAILSVPSGCESVCIELRLGTF
CCCCCCCEEEEEEEEHEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHEECCE
PIRANYLDIGSRRPLGIGAGSLALLSALPDAEVEAVIEGIAPAMRRYPRFSKSMLLGHVQ
EEEECEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ATRERGYAVLLDVVVERMGGIAIALPGPDGYPLGAISIAALNERITEREAAMARALRREA
HHHHCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAICQNWRPRSGATPDTEQERPAARPRTREEA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTPSTSLQKACRLLRALTDARNSRLTDLANAAGVDKASALRLLETLVAEGMVQRDAATK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFMPGPEWLTLHATTVHRTDLRPLVRPALIRLANAFQDSAILSVPSGCESVCIELRLGTF
CCCCCCCEEEEEEEEHEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHEECCE
PIRANYLDIGSRRPLGIGAGSLALLSALPDAEVEAVIEGIAPAMRRYPRFSKSMLLGHVQ
EEEECEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ATRERGYAVLLDVVVERMGGIAIALPGPDGYPLGAISIAALNERITEREAAMARALRREA
HHHHCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAICQNWRPRSGATPDTEQERPAARPRTREEA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]