BacMap

Definition	Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence.
Accession	NC_007348
Length	2,726,152

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The map label for this gene is phbB [H]

Identifier: 73537700

GI number: 73537700

Start: 483166

End: 483999

Strand: Direct

Name: phbB [H]

Synonym: Reut_B3865

Alternate gene names: 73537700

Gene position: 483166-483999 (Clockwise)

Preceding gene: 73537699

Following gene: 73537708

Centisome position: 17.72

GC content: 59.71

Gene sequence:

>834_bases
ATGCAACGGGAACTTGATCGGGACGACCAGGGGAACGCCTTAATCGGCAATCCAGGGGTTTTTCAACTTTACGAGAATGA
AGCAGGCAGGATGACCAAGAAAATCGCACTGGTAACGGGTGGCATGGGCGGGCTGGGAGAAGCCATCAGCATCAAATTGC
ACGACGCAGGCCACGCCGTGGTGGTGACGCATTCGCCGGGCAATGCGAACGCACAGAACTGGCTTGCCGAGATGGCCGCC
GCCGGCCGCGAGATGCGTGCGTACGAGGTCGACGTATCCGACTACGATGCCTGCCAGGCCTGCGCCGCGAAGATCATCGC
TGACGTTGGCCGCGTGGACATCCTCGTGAACAACGCCGGCATTACCCGCGACATGGCCTTCAAGAAGATGGACAAGCCGA
ACTGGGATGCCGTGATGCGGACCAATCTCGACTCGGTTTTCAATCTCACCAAGCCGCTGTGCGAAGGCATGGTCGAACGC
GGCTGGGGACGCATCATCAACATCTCTTCGGTCAACGGGTCCAAGGGCGCCTTCGGCCAGACCAACTATGCCGCCGCCAA
GGCCGGCATGCACGGCTTCACCAAGTCGCTGGCGCTGGAAGTGGCAAGAAAGGGCGTGACGGTCAACACGGTTTCTCCGG
GCTACCTTGCTACCAAAATGGTCAACGCCGTGCCCAAGGAAATCATGGATACCAAGATCCTGCCGCAGATTCCGGTTGGC
CGCGTCGGCAAGCCGGAAGAAGTGGCTGCGCTGATTGCTTACCTGTGTTCGGAGGACGCGGCCTATGTGACCGGGTCCAA
TATCGCCATCAATGGCGGGCAGCACATGCAGTAA

Upstream 100 bases:

>100_bases
TGTCCCTGGCTTACCGCACCGCGACACCAACCTTCCCGCAACGGCAGACAAAGCGGCACCGGAATCATTCCGGCGACCCG
CTTTTTGCCGTTTTGCGCGC

Downstream 100 bases:

>100_bases
GGCGTGGTCGAGTGCCGGGCCGCCATGGCTCGGCCGGACCGCGTATAGCGTGCCGGCATTGCATGGCCTGGAAGGCTTCG
TGACAAGCAAAGGGACGGCC

Product: 3-oxoacyl-[acyl-carrier-protein] reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQRELDRDDQGNALIGNPGVFQLYENEAGRMTKKIALVTGGMGGLGEAISIKLHDAGHAVVVTHSPGNANAQNWLAEMAA
AGREMRAYEVDVSDYDACQACAAKIIADVGRVDILVNNAGITRDMAFKKMDKPNWDAVMRTNLDSVFNLTKPLCEGMVER
GWGRIINISSVNGSKGAFGQTNYAAAKAGMHGFTKSLALEVARKGVTVNTVSPGYLATKMVNAVPKEIMDTKILPQIPVG
RVGKPEEVAALIAYLCSEDAAYVTGSNIAINGGQHMQ

Sequences:

>Translated_277_residues
MQRELDRDDQGNALIGNPGVFQLYENEAGRMTKKIALVTGGMGGLGEAISIKLHDAGHAVVVTHSPGNANAQNWLAEMAA
AGREMRAYEVDVSDYDACQACAAKIIADVGRVDILVNNAGITRDMAFKKMDKPNWDAVMRTNLDSVFNLTKPLCEGMVER
GWGRIINISSVNGSKGAFGQTNYAAAKAGMHGFTKSLALEVARKGVTVNTVSPGYLATKMVNAVPKEIMDTKILPQIPVG
RVGKPEEVAALIAYLCSEDAAYVTGSNIAINGGQHMQ
>Mature_277_residues
MQRELDRDDQGNALIGNPGVFQLYENEAGRMTKKIALVTGGMGGLGEAISIKLHDAGHAVVVTHSPGNANAQNWLAEMAA
AGREMRAYEVDVSDYDACQACAAKIIADVGRVDILVNNAGITRDMAFKKMDKPNWDAVMRTNLDSVFNLTKPLCEGMVER
GWGRIINISSVNGSKGAFGQTNYAAAKAGMHGFTKSLALEVARKGVTVNTVSPGYLATKMVNAVPKEIMDTKILPQIPVG
RVGKPEEVAALIAYLCSEDAAYVTGSNIAINGGQHMQ

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=37.890625, Blast_Score=165, Evalue=3e-41,
Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=32.1138211382114, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI4504505, Length=235, Percent_Identity=32.3404255319149, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=28.8617886178862, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=27.9245283018868, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=29.7520661157025, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=28.9156626506024, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=29.4354838709677, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI66933014, Length=173, Percent_Identity=33.5260115606936, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI20149619, Length=231, Percent_Identity=31.1688311688312, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI126723750, Length=249, Percent_Identity=25.7028112449799, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI4503301, Length=198, Percent_Identity=27.2727272727273, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI59889578, Length=193, Percent_Identity=31.6062176165803, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI4758504, Length=259, Percent_Identity=28.957528957529, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=31.3432835820896, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI40807363, Length=210, Percent_Identity=27.1428571428571, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI7657478, Length=190, Percent_Identity=28.4210526315789, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI4503817, Length=235, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI7705855, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI7706318, Length=207, Percent_Identity=24.6376811594203, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI157739938, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI83715985, Length=259, Percent_Identity=27.4131274131274, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI33667109, Length=201, Percent_Identity=28.3582089552239, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=44.8559670781893, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=34.8837209302326, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=33.0578512396694, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=31.5352697095436, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=28.9156626506024, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082160, Length=242, Percent_Identity=30.9917355371901, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787905, Length=252, Percent_Identity=30.1587301587302, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=33.0612244897959, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=27.8225806451613, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=31.3008130081301, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789378, Length=254, Percent_Identity=27.9527559055118, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=28.957528957529, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=32.6086956521739, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787526, Length=260, Percent_Identity=25, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=41.4634146341463, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=38, Blast_Score=158, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17568967, Length=240, Percent_Identity=31.25, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=31.1740890688259, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=32.5842696629214, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=29.2490118577075, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=28.2442748091603, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=32.48730964467, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=29.1666666666667, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI193203115, Length=232, Percent_Identity=31.4655172413793, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=27.9693486590038, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.0566037735849, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=26.9961977186312, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=27.9245283018868, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=28.2258064516129, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=30.5660377358491, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=29.718875502008, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=25.8555133079848, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=30.4347826086957, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=27.9693486590038, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=30.4347826086957, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=26.6666666666667, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=27.4436090225564, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17538182, Length=266, Percent_Identity=30.0751879699248, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=25, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=31.3432835820896, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=27.8195488721804, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=26.6917293233083, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=28.3400809716599, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=28.3018867924528, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=30.8080808080808, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=26.9961977186312, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=193, Percent_Identity=27.979274611399, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17508895, Length=245, Percent_Identity=25.7142857142857, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=25.2, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193207185, Length=146, Percent_Identity=32.1917808219178, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71997099, Length=209, Percent_Identity=29.1866028708134, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=231, Percent_Identity=32.034632034632, Blast_Score=110, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324126, Length=244, Percent_Identity=25.4098360655738, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320089, Length=209, Percent_Identity=27.7511961722488, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=36.2903225806452, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=33.4661354581673, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=32.4110671936759, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=33.0677290836653, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=30.4878048780488, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=32.5396825396825, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI18859837, Length=240, Percent_Identity=36.25, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=30.9917355371901, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21358495, Length=216, Percent_Identity=30.5555555555556, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24644337, Length=175, Percent_Identity=35.4285714285714, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI17737361, Length=259, Percent_Identity=27.7992277992278, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI21355631, Length=170, Percent_Identity=33.5294117647059, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581726, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24649181, Length=190, Percent_Identity=29.4736842105263, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI116007236, Length=234, Percent_Identity=29.0598290598291, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281364892, Length=184, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24665243, Length=202, Percent_Identity=30.6930693069307, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221331218, Length=202, Percent_Identity=30.6930693069307, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24665247, Length=202, Percent_Identity=30.6930693069307, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221331216, Length=202, Percent_Identity=30.6930693069307, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011283
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.36 [H]

Molecular weight: Translated: 29511; Mature: 29511

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRELDRDDQGNALIGNPGVFQLYENEAGRMTKKIALVTGGMGGLGEAISIKLHDAGHAV
CCCCCCCCCCCCEEECCCCEEEEEECCCCHHEEEEEEEECCCCCCCCEEEEEEECCCCEE
VVTHSPGNANAQNWLAEMAAAGREMRAYEVDVSDYDACQACAAKIIADVGRVDILVNNAG
EEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCC
ITRDMAFKKMDKPNWDAVMRTNLDSVFNLTKPLCEGMVERGWGRIINISSVNGSKGAFGQ
CCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
TNYAAAKAGMHGFTKSLALEVARKGVTVNTVSPGYLATKMVNAVPKEIMDTKILPQIPVG
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
RVGKPEEVAALIAYLCSEDAAYVTGSNIAINGGQHMQ
CCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCC
>Mature Secondary Structure
MQRELDRDDQGNALIGNPGVFQLYENEAGRMTKKIALVTGGMGGLGEAISIKLHDAGHAV
CCCCCCCCCCCCEEECCCCEEEEEECCCCHHEEEEEEEECCCCCCCCEEEEEEECCCCEE
VVTHSPGNANAQNWLAEMAAAGREMRAYEVDVSDYDACQACAAKIIADVGRVDILVNNAG
EEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCC
ITRDMAFKKMDKPNWDAVMRTNLDSVFNLTKPLCEGMVERGWGRIINISSVNGSKGAFGQ
CCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
TNYAAAKAGMHGFTKSLALEVARKGVTVNTVSPGYLATKMVNAVPKEIMDTKILPQIPVG
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
RVGKPEEVAALIAYLCSEDAAYVTGSNIAINGGQHMQ
CCCCHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2670935 [H]