Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is 73537694
Identifier: 73537694
GI number: 73537694
Start: 476670
End: 477656
Strand: Reverse
Name: 73537694
Synonym: Reut_B3859
Alternate gene names: NA
Gene position: 477656-476670 (Counterclockwise)
Preceding gene: 73537695
Following gene: 73537693
Centisome position: 17.52
GC content: 66.46
Gene sequence:
>987_bases ATGCTGATGTTCAAACGCCGCGCGCTGCGGCTGCTGTGCCCTGCCCTCGCCACGCTTGCCGCGCTCGCCATCGCCGCGCC TGTCAAGGCCGGCGATTACCCTGAGCGCCCCGTGAAGATCGTTTCGGTCACCAGTGCCGGGACCGGCGTCGACGACTACA CGCGCCTGCTGGCCAAGTACCTGTCCGACAAGCTCGGCCAGAGCTTCGTTGTCGAAAACCGTCCGGGCGGCAATATGGTC GTGGCCACCGACTATGTGTCCAAGGCTGCGCCGGACGGCTACACGCTGCTGCTGTCTGGCTCCGGCGCCATGGCCGCCAA CCCATTCCTGTTCCGCAGGCTGCCGTATGACCCGATGAAGGACTTCGTCCCCGTGGCGCGCCTGTCGGTGCTCCCCATTG CCGTGATCGTGCCGGGCAACTCGCCCTACCACACCGCCGGCGAACTGATCGCGGCCGCGCGCGCAAATCCCGGCAAGCTG AACTTTGCTACGTCCAGCACGGGCTACCGCGTCATCCTGACCGCGTTCAACGATGCGGCAAAAATCCAGTCCGTCAGCGT GCCCTACAAGGCCGCCAGCGCGATGATGACCGATGTCATGGGCGGCATGGTCGACTACGGCGGCGTTGAAGTGTCGGCCA TCATCCCGCACGTGCAGAGCGGCAAGCTGCGCGCGCTGGCCATTACCGGCCCGAACCGCCTGGCGCAGCTCAAGGATGTG CCGACGCTGCGCGAACTCGGCCTGGAGCGCTATTCGCTCAACACCTGGGTCGGCCTGTTCGCTCCGGCCGGCACGCCCAA GCCCATCGTCGACAAGCTGACCCGGCTTGCCTTGCAGTTCACGTCCACACCCGAGGCCATGGCGCACTACCAGGCACGCG GCAGCGCGGCCTATCCCGCCGATGGCGCCGAACTGCGCAAGAACATCGTGGCCGACCAGCAGGGCTGGAAGCAGATGATC ACGGTGGCCGGCATCCAGCCCGAATGA
Upstream 100 bases:
>100_bases ACCCCGCGCCACGGCGCGGGGTTGTGCCCAAGGAGCAAGTGCCGGCACGACCGGGCCCTACCGCCCGGCAACTTCAAGAC GACAAAAAAGGAGACTGACC
Downstream 100 bases:
>100_bases ACAGGAACACCAATCAATCCTGGCCCCACAGGGCAACAATGAATCGCCGGAGAACCGATATATGAAGACGCTGGACCGCT TCTACATCCAGGGAGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MLMFKRRALRLLCPALATLAALAIAAPVKAGDYPERPVKIVSVTSAGTGVDDYTRLLAKYLSDKLGQSFVVENRPGGNMV VATDYVSKAAPDGYTLLLSGSGAMAANPFLFRRLPYDPMKDFVPVARLSVLPIAVIVPGNSPYHTAGELIAAARANPGKL NFATSSTGYRVILTAFNDAAKIQSVSVPYKAASAMMTDVMGGMVDYGGVEVSAIIPHVQSGKLRALAITGPNRLAQLKDV PTLRELGLERYSLNTWVGLFAPAGTPKPIVDKLTRLALQFTSTPEAMAHYQARGSAAYPADGAELRKNIVADQQGWKQMI TVAGIQPE
Sequences:
>Translated_328_residues MLMFKRRALRLLCPALATLAALAIAAPVKAGDYPERPVKIVSVTSAGTGVDDYTRLLAKYLSDKLGQSFVVENRPGGNMV VATDYVSKAAPDGYTLLLSGSGAMAANPFLFRRLPYDPMKDFVPVARLSVLPIAVIVPGNSPYHTAGELIAAARANPGKL NFATSSTGYRVILTAFNDAAKIQSVSVPYKAASAMMTDVMGGMVDYGGVEVSAIIPHVQSGKLRALAITGPNRLAQLKDV PTLRELGLERYSLNTWVGLFAPAGTPKPIVDKLTRLALQFTSTPEAMAHYQARGSAAYPADGAELRKNIVADQQGWKQMI TVAGIQPE >Mature_328_residues MLMFKRRALRLLCPALATLAALAIAAPVKAGDYPERPVKIVSVTSAGTGVDDYTRLLAKYLSDKLGQSFVVENRPGGNMV VATDYVSKAAPDGYTLLLSGSGAMAANPFLFRRLPYDPMKDFVPVARLSVLPIAVIVPGNSPYHTAGELIAAARANPGKL NFATSSTGYRVILTAFNDAAKIQSVSVPYKAASAMMTDVMGGMVDYGGVEVSAIIPHVQSGKLRALAITGPNRLAQLKDV PTLRELGLERYSLNTWVGLFAPAGTPKPIVDKLTRLALQFTSTPEAMAHYQARGSAAYPADGAELRKNIVADQQGWKQMI TVAGIQPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34905; Mature: 34905
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMFKRRALRLLCPALATLAALAIAAPVKAGDYPERPVKIVSVTSAGTGVDDYTRLLAKY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH LSDKLGQSFVVENRPGGNMVVATDYVSKAAPDGYTLLLSGSGAMAANPFLFRRLPYDPMK HHHHCCCEEEEECCCCCCEEEEECHHHHCCCCCEEEEEECCCCCCCCCHHEECCCCCHHH DFVPVARLSVLPIAVIVPGNSPYHTAGELIAAARANPGKLNFATSSTGYRVILTAFNDAA HHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCH KIQSVSVPYKAASAMMTDVMGGMVDYGGVEVSAIIPHVQSGKLRALAITGPNRLAQLKDV HHEEECCCHHHHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHCC PTLRELGLERYSLNTWVGLFAPAGTPKPIVDKLTRLALQFTSTPEAMAHYQARGSAAYPA CCHHHCCCCCEEHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC DGAELRKNIVADQQGWKQMITVAGIQPE CHHHHHHHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MLMFKRRALRLLCPALATLAALAIAAPVKAGDYPERPVKIVSVTSAGTGVDDYTRLLAKY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH LSDKLGQSFVVENRPGGNMVVATDYVSKAAPDGYTLLLSGSGAMAANPFLFRRLPYDPMK HHHHCCCEEEEECCCCCCEEEEECHHHHCCCCCEEEEEECCCCCCCCCHHEECCCCCHHH DFVPVARLSVLPIAVIVPGNSPYHTAGELIAAARANPGKLNFATSSTGYRVILTAFNDAA HHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCH KIQSVSVPYKAASAMMTDVMGGMVDYGGVEVSAIIPHVQSGKLRALAITGPNRLAQLKDV HHEEECCCHHHHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHCC PTLRELGLERYSLNTWVGLFAPAGTPKPIVDKLTRLALQFTSTPEAMAHYQARGSAAYPA CCHHHCCCCCEEHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC DGAELRKNIVADQQGWKQMITVAGIQPE CHHHHHHHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]