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The map label for this gene is ydeU [H]

Identifier: 73537641

GI number: 73537641

Start: 411567

End: 414341

Strand: Reverse

Name: ydeU [H]

Synonym: Reut_B3806

Alternate gene names: 73537641

Gene position: 414341-411567 (Counterclockwise)

Preceding gene: 73537642

Following gene: 73537640

Centisome position: 15.2

GC content: 68.32

Gene sequence:

>2775_bases
ATGCCGCATCGTTCCAGCCGCCCGCCCCACGGCACATGGCCAGCCACGGTGCTCGCCGTGGCGCTCGGCCTGCGCCCCGA
TGTCGCACTCGCCGCCTGTGATCTCGCCGCCCCTGCCGACGGGCAGACCGCCACATGCACGCCGCTGGCGCCCAATCCCG
CCACCACTCCCATCGTCGCGCAGCCGGGCAGCAGCCGGGTCACGGTGACCATTGAGCCGAATGCCGAACTGGCGGTGGCG
GCAGGCAGCGCAGTCGTCGTCCGCGAGCAAAGCCTGGTGGACAATGGCGGCACCTTGCGAGGAACGGGTGACGCGGCCCC
CACCGTGCTCATGCAAGGCACCGGCAACACGCTCGACAACCGCGGCACGATCATTGCCACGGGCACGGCGTCGCACGCCG
TCTTCGTGGACGGGAACGCGCCTGCCACGGTACGCAACAGCGGCACGCTTCTCGCCACGGGAACGGACAGCTCCGGGTTG
CAGGGCGGCACGGCGCTGACCGTGACCAACACCGCCGCCGGGCGCATCCTGAGCGATCAGTCCAACGCCATCTTCGCCAA
CCATGGCATCACGCTGGACAATGCCGGCCTGATCCACTCGGACGCGACCAGCATCATCGTCAACAACGGCCCCAGCTCGA
TCGACAATACCGGCACGATCGAATCGTTGAGTGGAAACGCCATCGGCGCGACAAGAGCGGCTGTCGTCATTACCAACCGC
GGCACGATCTCCGGCGGCTTCCGCGCGATTGACCTGGACGTCGGCAATGACGTCGTGAACATGCTCGGCGGCACCATCCG
CGGCGCAATCGTGCTGCGTGAGGGGGATGACCGCTTCGAGATGTCCGGCGGGCAAGTCGATGCCGTGGACATGGGTCCGG
GCCGCGACACCGTCGTCATCTCCGGTGGCCAGGTGAATGGCGCCATCGCGCTCGGCGACGACAGCGATGCCGCCACGTTG
CGCGGGCTGACCGATGCCAACCTGGCTGGCATGCCACGTCTGGATGGCGGCAGCGGCCTGGACAGCCTGACCCTCGACCA
GAGCCGTCTCTCCGGCGTGGCCCGCCTGGTCGGCTTTGAAGCAGTAAACCTGACCAACCACAGCACGCTTGTCATGGACG
GCGACCTGGTACTCGGCGACCCGGCCCTGCAAGCGCCTGCGGCCCTTGGCTTGCAGCGCCCACTCGCTGTTACCGCGCCA
ACGGCCGGCACGCTGGACATCGACAGCACCAGCACGCTGCAGATCGGCCCCGCCGGCAACGCGGCCATTGTGGCAGCAGC
CGCGGGACAACTGGCAGCGGTCAACAATGCCGGCGTCATCGACCTGACTACGGGCTCCACGCCGGCAGCGAGCCGCCTGC
AGATCGTCGGCCACTACACGGGCAACGGCGGGCAACTGCTGCTGCGCAGCATACTGGGCGCGGACAACTCGCCCTCGGAC
CGGCTTGGCATCTCGCAAGGCACGGTTTCCGGAATCACCACGATCGCGCTGGCCAATGCCGGCGGCAATGGCGGGCTGAC
CGTAGTGGACGGGATCCCGCTCGTTGTGGTCACCGACGGCGGCACCTCGACGCCATCCGCGTTCCGGCTCGCGGGAGGCC
AGATCCAGGCCGGCGCATACGTCTATGTGCTGTACCGCGGTGGCGTCAGCAACGGTACGGCCGATAGCTGGTTCCTGCGA
TCCAGCCTTGCCCCGGCTTCGTCAGTGTCCCCGGCACCGCCGTCCGCCGCGCCCCAGCCGGTACTGTCACCACAACCGGC
GGCAGGCAGCCCCGCCCTGCCGCCCGCGCCGGCAGCCGATGCGTCGCCGGTCCCACTCTACCGGCCGGCAGTGCCCGTCT
ATGCGGCCATTGCAGGCGTCGCCCGACAGCTGGGCGTCGACCAGATCGCCACCTTCCATGAACGCCAGGGCGAGCAGGCC
CTGGTGACCGAACGCGGCGCGCTCGGTGCTGCCTGGGCCCGGGCCTGGGGCAGCAACGGCCATCAGTCCCAAGGCGGCGA
GGTACACCCGGATTTCAGCGGCACGCTCGCCGGCCTGCAAGTCGGGCAAGACTTGTACGCCATGGCGGGCGATGGCCCCG
GTGGCCATCGCGATCATTTCGGTGCCTACTTCGGCTACGCGCGGGCGGCGGGCGACATTGCCGGCTTCGCGCTTGGCTTT
CCCGGCTATGCGGCCGGCAAGCTCGATATCAACGCGTACAGCGTAGGCGCATACTGGAGCCATATCGGACCCGGCAACTG
GTACACCGATACGGTGCTGCAGTACAGCACGCTGACGATCGATCCGAGCACCCATACCGGCACGGGCGCCACAACACATG
GCAACGCACTGGCGCTATCCGCAGAGGGCGGCATGCCGCTCCAGTTGTCGCCCACCGTGACACTGGAGCCGCAAGTGCAG
CTTGTGTGGCAGCACCTTTCCCTCAATGACCTGCAGGACCAGGTCAGCACCGTGACTTTCCGCAATGCCGACAGCACGCT
CGCACGTGCCGGTGTCCGGCTCCAGAAAGTGCTGGAGTACCGCGGCGTGCGCTGGCAGCCCTGGCTGCGCACGGATATCC
TGCACGCCTTCGGGGGCACGGACCAGACTACCTTTGCAGCCACGACCTCGATCCCTACCAGCCAGGCCTACACGGCTGCG
CGTTTCGAGGCGGGGATCGCCGGAAAGGCTGGCCCGCGCGGCAGCGTCTACGGCACCGTCGGCTACCTGACCAGCCTGGA
CGGCGTGCCACGCAGCGCGTGGTTCGGCAATATCGGCGCACGCTGGTCCTGGTAA

Upstream 100 bases:

>100_bases
CCAGAGCCTCGCGCGGCACAGATCACCCTTGCCATCCGGCCAGCCGCGCCTATTGTTCCCGTGAAGAGCGCACCTCAGCG
CGCCAGACCACCGGGACGCC

Downstream 100 bases:

>100_bases
CGTGCCCGGTCGCGGGTCCTATCGCCGGGCAGCCGTCGGGAGTCGGTCTGCAAGCCTGCGCTACAAGTGCTACCCTGCCG
GCCACTACACGCTTGCGGCA

Product: outer membrane autotransporter barrel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 924; Mature: 923

Protein sequence:

>924_residues
MPHRSSRPPHGTWPATVLAVALGLRPDVALAACDLAAPADGQTATCTPLAPNPATTPIVAQPGSSRVTVTIEPNAELAVA
AGSAVVVREQSLVDNGGTLRGTGDAAPTVLMQGTGNTLDNRGTIIATGTASHAVFVDGNAPATVRNSGTLLATGTDSSGL
QGGTALTVTNTAAGRILSDQSNAIFANHGITLDNAGLIHSDATSIIVNNGPSSIDNTGTIESLSGNAIGATRAAVVITNR
GTISGGFRAIDLDVGNDVVNMLGGTIRGAIVLREGDDRFEMSGGQVDAVDMGPGRDTVVISGGQVNGAIALGDDSDAATL
RGLTDANLAGMPRLDGGSGLDSLTLDQSRLSGVARLVGFEAVNLTNHSTLVMDGDLVLGDPALQAPAALGLQRPLAVTAP
TAGTLDIDSTSTLQIGPAGNAAIVAAAAGQLAAVNNAGVIDLTTGSTPAASRLQIVGHYTGNGGQLLLRSILGADNSPSD
RLGISQGTVSGITTIALANAGGNGGLTVVDGIPLVVVTDGGTSTPSAFRLAGGQIQAGAYVYVLYRGGVSNGTADSWFLR
SSLAPASSVSPAPPSAAPQPVLSPQPAAGSPALPPAPAADASPVPLYRPAVPVYAAIAGVARQLGVDQIATFHERQGEQA
LVTERGALGAAWARAWGSNGHQSQGGEVHPDFSGTLAGLQVGQDLYAMAGDGPGGHRDHFGAYFGYARAAGDIAGFALGF
PGYAAGKLDINAYSVGAYWSHIGPGNWYTDTVLQYSTLTIDPSTHTGTGATTHGNALALSAEGGMPLQLSPTVTLEPQVQ
LVWQHLSLNDLQDQVSTVTFRNADSTLARAGVRLQKVLEYRGVRWQPWLRTDILHAFGGTDQTTFAATTSIPTSQAYTAA
RFEAGIAGKAGPRGSVYGTVGYLTSLDGVPRSAWFGNIGARWSW

Sequences:

>Translated_924_residues
MPHRSSRPPHGTWPATVLAVALGLRPDVALAACDLAAPADGQTATCTPLAPNPATTPIVAQPGSSRVTVTIEPNAELAVA
AGSAVVVREQSLVDNGGTLRGTGDAAPTVLMQGTGNTLDNRGTIIATGTASHAVFVDGNAPATVRNSGTLLATGTDSSGL
QGGTALTVTNTAAGRILSDQSNAIFANHGITLDNAGLIHSDATSIIVNNGPSSIDNTGTIESLSGNAIGATRAAVVITNR
GTISGGFRAIDLDVGNDVVNMLGGTIRGAIVLREGDDRFEMSGGQVDAVDMGPGRDTVVISGGQVNGAIALGDDSDAATL
RGLTDANLAGMPRLDGGSGLDSLTLDQSRLSGVARLVGFEAVNLTNHSTLVMDGDLVLGDPALQAPAALGLQRPLAVTAP
TAGTLDIDSTSTLQIGPAGNAAIVAAAAGQLAAVNNAGVIDLTTGSTPAASRLQIVGHYTGNGGQLLLRSILGADNSPSD
RLGISQGTVSGITTIALANAGGNGGLTVVDGIPLVVVTDGGTSTPSAFRLAGGQIQAGAYVYVLYRGGVSNGTADSWFLR
SSLAPASSVSPAPPSAAPQPVLSPQPAAGSPALPPAPAADASPVPLYRPAVPVYAAIAGVARQLGVDQIATFHERQGEQA
LVTERGALGAAWARAWGSNGHQSQGGEVHPDFSGTLAGLQVGQDLYAMAGDGPGGHRDHFGAYFGYARAAGDIAGFALGF
PGYAAGKLDINAYSVGAYWSHIGPGNWYTDTVLQYSTLTIDPSTHTGTGATTHGNALALSAEGGMPLQLSPTVTLEPQVQ
LVWQHLSLNDLQDQVSTVTFRNADSTLARAGVRLQKVLEYRGVRWQPWLRTDILHAFGGTDQTTFAATTSIPTSQAYTAA
RFEAGIAGKAGPRGSVYGTVGYLTSLDGVPRSAWFGNIGARWSW
>Mature_923_residues
PHRSSRPPHGTWPATVLAVALGLRPDVALAACDLAAPADGQTATCTPLAPNPATTPIVAQPGSSRVTVTIEPNAELAVAA
GSAVVVREQSLVDNGGTLRGTGDAAPTVLMQGTGNTLDNRGTIIATGTASHAVFVDGNAPATVRNSGTLLATGTDSSGLQ
GGTALTVTNTAAGRILSDQSNAIFANHGITLDNAGLIHSDATSIIVNNGPSSIDNTGTIESLSGNAIGATRAAVVITNRG
TISGGFRAIDLDVGNDVVNMLGGTIRGAIVLREGDDRFEMSGGQVDAVDMGPGRDTVVISGGQVNGAIALGDDSDAATLR
GLTDANLAGMPRLDGGSGLDSLTLDQSRLSGVARLVGFEAVNLTNHSTLVMDGDLVLGDPALQAPAALGLQRPLAVTAPT
AGTLDIDSTSTLQIGPAGNAAIVAAAAGQLAAVNNAGVIDLTTGSTPAASRLQIVGHYTGNGGQLLLRSILGADNSPSDR
LGISQGTVSGITTIALANAGGNGGLTVVDGIPLVVVTDGGTSTPSAFRLAGGQIQAGAYVYVLYRGGVSNGTADSWFLRS
SLAPASSVSPAPPSAAPQPVLSPQPAAGSPALPPAPAADASPVPLYRPAVPVYAAIAGVARQLGVDQIATFHERQGEQAL
VTERGALGAAWARAWGSNGHQSQGGEVHPDFSGTLAGLQVGQDLYAMAGDGPGGHRDHFGAYFGYARAAGDIAGFALGFP
GYAAGKLDINAYSVGAYWSHIGPGNWYTDTVLQYSTLTIDPSTHTGTGATTHGNALALSAEGGMPLQLSPTVTLEPQVQL
VWQHLSLNDLQDQVSTVTFRNADSTLARAGVRLQKVLEYRGVRWQPWLRTDILHAFGGTDQTTFAATTSIPTSQAYTAAR
FEAGIAGKAGPRGSVYGTVGYLTSLDGVPRSAWFGNIGARWSW

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI48994897, Length=484, Percent_Identity=27.4793388429752, Blast_Score=81, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 93352; Mature: 93221

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHRSSRPPHGTWPATVLAVALGLRPDVALAACDLAAPADGQTATCTPLAPNPATTPIVA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCEEE
QPGSSRVTVTIEPNAELAVAAGSAVVVREQSLVDNGGTLRGTGDAAPTVLMQGTGNTLDN
CCCCCEEEEEECCCCCEEEECCCEEEEEEHHHHCCCCEEEECCCCCCEEEEECCCCCCCC
RGTIIATGTASHAVFVDGNAPATVRNSGTLLATGTDSSGLQGGTALTVTNTAAGRILSDQ
CCCEEEECCCCEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCEEECC
SNAIFANHGITLDNAGLIHSDATSIIVNNGPSSIDNTGTIESLSGNAIGATRAAVVITNR
CCEEEEECCEEECCCCEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCCCEEEEEEECC
GTISGGFRAIDLDVGNDVVNMLGGTIRGAIVLREGDDRFEMSGGQVDAVDMGPGRDTVVI
CCCCCCEEEEEEECCCHHHHHCCCCEEEEEEEEECCCCEEECCCEEEEEECCCCCCEEEE
SGGQVNGAIALGDDSDAATLRGLTDANLAGMPRLDGGSGLDSLTLDQSRLSGVARLVGFE
ECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCEE
AVNLTNHSTLVMDGDLVLGDPALQAPAALGLQRPLAVTAPTAGTLDIDSTSTLQIGPAGN
EEEECCCEEEEEECCEEECCCHHCCCHHHCCCCCEEEECCCCCEEECCCCCEEEECCCCC
AAIVAAAAGQLAAVNNAGVIDLTTGSTPAASRLQIVGHYTGNGGQLLLRSILGADNSPSD
EEEEEECCCCEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCC
RLGISQGTVSGITTIALANAGGNGGLTVVDGIPLVVVTDGGTSTPSAFRLAGGQIQAGAY
CCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEEECCCCCCCCEEEECCCEEECCEE
VYVLYRGGVSNGTADSWFLRSSLAPASSVSPAPPSAAPQPVLSPQPAAGSPALPPAPAAD
EEEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPVPLYRPAVPVYAAIAGVARQLGVDQIATFHERQGEQALVTERGALGAAWARAWGSNG
CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCC
HQSQGGEVHPDFSGTLAGLQVGQDLYAMAGDGPGGHRDHFGAYFGYARAAGDIAGFALGF
CCCCCCEECCCCCCEEEHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHEEEECC
PGYAAGKLDINAYSVGAYWSHIGPGNWYTDTVLQYSTLTIDPSTHTGTGATTHGNALALS
CCCCCCEEEEEEEEECCEECCCCCCCCEECCEEEEEEEEECCCCCCCCCCCCCCCEEEEE
AEGGMPLQLSPTVTLEPQVQLVWQHLSLNDLQDQVSTVTFRNADSTLARAGVRLQKVLEY
CCCCCCEEECCCEEECCCCEEEEECCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHH
RGVRWQPWLRTDILHAFGGTDQTTFAATTSIPTSQAYTAARFEAGIAGKAGPRGSVYGTV
CCCEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCCCCEEEEE
GYLTSLDGVPRSAWFGNIGARWSW
HHHCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure 
PHRSSRPPHGTWPATVLAVALGLRPDVALAACDLAAPADGQTATCTPLAPNPATTPIVA
CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCEEE
QPGSSRVTVTIEPNAELAVAAGSAVVVREQSLVDNGGTLRGTGDAAPTVLMQGTGNTLDN
CCCCCEEEEEECCCCCEEEECCCEEEEEEHHHHCCCCEEEECCCCCCEEEEECCCCCCCC
RGTIIATGTASHAVFVDGNAPATVRNSGTLLATGTDSSGLQGGTALTVTNTAAGRILSDQ
CCCEEEECCCCEEEEECCCCCEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCEEECC
SNAIFANHGITLDNAGLIHSDATSIIVNNGPSSIDNTGTIESLSGNAIGATRAAVVITNR
CCEEEEECCEEECCCCEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCCCEEEEEEECC
GTISGGFRAIDLDVGNDVVNMLGGTIRGAIVLREGDDRFEMSGGQVDAVDMGPGRDTVVI
CCCCCCEEEEEEECCCHHHHHCCCCEEEEEEEEECCCCEEECCCEEEEEECCCCCCEEEE
SGGQVNGAIALGDDSDAATLRGLTDANLAGMPRLDGGSGLDSLTLDQSRLSGVARLVGFE
ECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCEE
AVNLTNHSTLVMDGDLVLGDPALQAPAALGLQRPLAVTAPTAGTLDIDSTSTLQIGPAGN
EEEECCCEEEEEECCEEECCCHHCCCHHHCCCCCEEEECCCCCEEECCCCCEEEECCCCC
AAIVAAAAGQLAAVNNAGVIDLTTGSTPAASRLQIVGHYTGNGGQLLLRSILGADNSPSD
EEEEEECCCCEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCC
RLGISQGTVSGITTIALANAGGNGGLTVVDGIPLVVVTDGGTSTPSAFRLAGGQIQAGAY
CCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEEECCCCCCCCEEEECCCEEECCEE
VYVLYRGGVSNGTADSWFLRSSLAPASSVSPAPPSAAPQPVLSPQPAAGSPALPPAPAAD
EEEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPVPLYRPAVPVYAAIAGVARQLGVDQIATFHERQGEQALVTERGALGAAWARAWGSNG
CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCC
HQSQGGEVHPDFSGTLAGLQVGQDLYAMAGDGPGGHRDHFGAYFGYARAAGDIAGFALGF
CCCCCCEECCCCCCEEEHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHEEEECC
PGYAAGKLDINAYSVGAYWSHIGPGNWYTDTVLQYSTLTIDPSTHTGTGATTHGNALALS
CCCCCCEEEEEEEEECCEECCCCCCCCEECCEEEEEEEEECCCCCCCCCCCCCCCEEEEE
AEGGMPLQLSPTVTLEPQVQLVWQHLSLNDLQDQVSTVTFRNADSTLARAGVRLQKVLEY
CCCCCCEEECCCEEECCCCEEEEECCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHH
RGVRWQPWLRTDILHAFGGTDQTTFAATTSIPTSQAYTAARFEAGIAGKAGPRGSVYGTV
CCCEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCCCCEEEEE
GYLTSLDGVPRSAWFGNIGARWSW
HHHCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]