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The map label for this gene is rutD [H]

Identifier: 73537622

GI number: 73537622

Start: 388807

End: 389631

Strand: Direct

Name: rutD [H]

Synonym: Reut_B3787

Alternate gene names: 73537622

Gene position: 388807-389631 (Clockwise)

Preceding gene: 73537621

Following gene: 73537623

Centisome position: 14.26

GC content: 64.85

Gene sequence:

>825_bases
GTGAGCACCTTCCTCTACGGCGGCAATGTCAATGCCAACGGCATCCGCCAGCATTACCTGCGCTATGGCGGCAACGATGG
CGAACGGGCATCGCGCGATGCCGTGATCATCGTGCCGGGCATCACGAGCCCGGCTATTACGTGGGGCTTCGTCGGCGAGC
AGTTCGGCCAGCGCTTCGATACCTATGTGCTGGATGTACGCGGCCGTGGGTTGTCTGAGGCCAGCGACACGCTCGACTAC
AGCCTGGACGCCCAAGCTGCCGACGTGATTGCGTTTGCCGAGGCACTGGGCCTACAGCGCTATGCCATCGTTGGTCATTC
GATGGGCGGTCGCATTGGCGTGCGTGCCGCGCGCCAGCATCCAGCAGGACTCACGCGTCTGGTAATGGTCGATCCGCCTG
TCTCCGGCCCCGGCCGACGCGCCTATCCCGCGCAACTGCCGTGGTACATCGATTCGATCTGCCTTGCCCGCGCAGGTATC
GACGCCGAAGGCATGCGCCGCTTCTGCCCGACGTGGACCGAAGATCAGTTGCGCCTGCGCGCCGAATGGCTGCACACGTG
CGACGAGCGCGCCATCCTCGCCAGCTTCAATGGCTTTCACGAAGACGACATCCACGCGGACCTGCCGCACGTGAAGGTAC
CCACGCTGCTGATGACCGCCGGGCGTGGCGACGTGGTGCGCGCCGAAGACGTCGAGGAAATCCGCAAGCTCGTGCCCGGC
ATACTGGTGAGCCACGTGGCCGATGCGGGCCACATGATTCCGTGGGACGACGAGGCCGGCTTCTACCGTGCCTTCGGCGA
TTTCCTCAGTGCGCCGCTGCTTTGA

Upstream 100 bases:

>100_bases
GCCATTGCCACGACCTACGCCATGCTTCGCGCGCTGGACCTCGAGCCGGTCGTGCCGGGCGCCGGTGCGCTGCTGTCCGG
CGCCTACTGAGGCCTGCGCC

Downstream 100 bases:

>100_bases
TGAACGCCTGCCACCCACCCCGTCACGCAAGGAGCCGACATGCCGGTCAGCGACCATCAGATGATCGAAGCCTGGACCCA
GGTGCTCAAGCTGTCGAAGC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSTFLYGGNVNANGIRQHYLRYGGNDGERASRDAVIIVPGITSPAITWGFVGEQFGQRFDTYVLDVRGRGLSEASDTLDY
SLDAQAADVIAFAEALGLQRYAIVGHSMGGRIGVRAARQHPAGLTRLVMVDPPVSGPGRRAYPAQLPWYIDSICLARAGI
DAEGMRRFCPTWTEDQLRLRAEWLHTCDERAILASFNGFHEDDIHADLPHVKVPTLLMTAGRGDVVRAEDVEEIRKLVPG
ILVSHVADAGHMIPWDDEAGFYRAFGDFLSAPLL

Sequences:

>Translated_274_residues
MSTFLYGGNVNANGIRQHYLRYGGNDGERASRDAVIIVPGITSPAITWGFVGEQFGQRFDTYVLDVRGRGLSEASDTLDY
SLDAQAADVIAFAEALGLQRYAIVGHSMGGRIGVRAARQHPAGLTRLVMVDPPVSGPGRRAYPAQLPWYIDSICLARAGI
DAEGMRRFCPTWTEDQLRLRAEWLHTCDERAILASFNGFHEDDIHADLPHVKVPTLLMTAGRGDVVRAEDVEEIRKLVPG
ILVSHVADAGHMIPWDDEAGFYRAFGDFLSAPLL
>Mature_273_residues
STFLYGGNVNANGIRQHYLRYGGNDGERASRDAVIIVPGITSPAITWGFVGEQFGQRFDTYVLDVRGRGLSEASDTLDYS
LDAQAADVIAFAEALGLQRYAIVGHSMGGRIGVRAARQHPAGLTRLVMVDPPVSGPGRRAYPAQLPWYIDSICLARAGID
AEGMRRFCPTWTEDQLRLRAEWLHTCDERAILASFNGFHEDDIHADLPHVKVPTLLMTAGRGDVVRAEDVEEIRKLVPGI
LVSHVADAGHMIPWDDEAGFYRAFGDFLSAPLL

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30062; Mature: 29931

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFLYGGNVNANGIRQHYLRYGGNDGERASRDAVIIVPGITSPAITWGFVGEQFGQRFD
CCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
TYVLDVRGRGLSEASDTLDYSLDAQAADVIAFAEALGLQRYAIVGHSMGGRIGVRAARQH
EEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHCC
PAGLTRLVMVDPPVSGPGRRAYPAQLPWYIDSICLARAGIDAEGMRRFCPTWTEDQLRLR
CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
AEWLHTCDERAILASFNGFHEDDIHADLPHVKVPTLLMTAGRGDVVRAEDVEEIRKLVPG
HHHHHHCCCCEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECHHHHHHHHHHHHH
ILVSHVADAGHMIPWDDEAGFYRAFGDFLSAPLL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
STFLYGGNVNANGIRQHYLRYGGNDGERASRDAVIIVPGITSPAITWGFVGEQFGQRFD
CEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
TYVLDVRGRGLSEASDTLDYSLDAQAADVIAFAEALGLQRYAIVGHSMGGRIGVRAARQH
EEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHCC
PAGLTRLVMVDPPVSGPGRRAYPAQLPWYIDSICLARAGIDAEGMRRFCPTWTEDQLRLR
CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
AEWLHTCDERAILASFNGFHEDDIHADLPHVKVPTLLMTAGRGDVVRAEDVEEIRKLVPG
HHHHHHCCCCEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECHHHHHHHHHHHHH
ILVSHVADAGHMIPWDDEAGFYRAFGDFLSAPLL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA