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The map label for this gene is ftrA [H]

Identifier: 73537422

GI number: 73537422

Start: 144066

End: 145055

Strand: Direct

Name: ftrA [H]

Synonym: Reut_B3587

Alternate gene names: 73537422

Gene position: 144066-145055 (Clockwise)

Preceding gene: 73537415

Following gene: 73537425

Centisome position: 5.28

GC content: 60.51

Gene sequence:

>990_bases
ATGTCAAAGAACAAAACGCAAACCCGTGCCAACGGAGGGCTGGTAGCAGTCGTCGTCTACGACGGGCTAAGCCTGTTTGA
ATACGGCTGCGCCGTGGAAGTATTCGGTCTGCCCAGACCGGAAATGGGAGACGAGTGGTATCGCTTTGCGACATGTTCGG
CCGAGCCTGGAACGTTGCGCGGAGTGGGCGGTATCCAGGTGCAAGCAGACGGGGGCCTTGAACTTTTATCGAAGGCCAAG
ACAATCATTGTTCCCGGGTGGCGCAGCATCGATGCCGTTGTGCCGCCGGAGCTTTGCCGTGCTTTGCAAAAGGCGAACAA
GCGCGGAGCGAGGGTTATGTCGATCTGCACCGGTGCCTTTGTATTGGCTGCCGCAGGCTTGCTTGACGGCAAGCGGGCGA
CTACCCACTGGCGTCACGCGACAGCGCTTGCGGAACGGTATCCGGAAATCCGGGTAGAGGCAGATGTGCTCTACGTCGAT
GCTGGCGATGTCCTGACTTCGGCCGGCAGTGCGGCGGGAATCGACCTGTGCCTGCACCTGATTCGCCGGGACTTCGGGCC
TCGCGCTGCCAATCAGGTCGCACGTCGGCTGGTCATGCCCCCGCACCGTGAAGGCGGTCAGGCCCAGTATATTGCCGAGC
CGGTTTCGAAGCGCAGCAGCGCATCGTTGGCTCCTCTCTTGGACACGGTGCGCGCAACATTGGGGGAAGACTGGCCGATT
GTCAGGATGGCAAAACAAGCCGCAATGAGTGGCCGCACCTTCCAGCGCCACTTCGTCAACATGATGGCCATGCCGCCTGG
TGAGTGGTTGCTGATCGAGCGGATCAGCCGAGCCAGGGTGTTGCTCGAAGAAACCGGATTATCGATGGATGACATCGCGG
TGCAGGTGGGCTTTGGTGCCGCAGCCACGTTGCGCAATCATTTTCGCACCCGGCTTGGAACAAGTCCTGGATACTACCGG
CGGCGTTTCAGCGCGTCAGACGAGCACTGA

Upstream 100 bases:

>100_bases
GGGTTTGCCGGTCTGGACACTTCTGAGTCGCGCGACAGCCGGGCCACGTATCCACCTCGCCAGGTGACCTCGACTGCGAC
CCACTAGCGATCCGTCATTC

Downstream 100 bases:

>100_bases
TTTCAACCATGGTGTGCCATTTGGGCCGACGGTAGACAAGTCTTGCCCGGAAGGGGGTAGAACCGGATAACCGCAACCGG
GTACAACAGTTCGGGCAGCT

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSKNKTQTRANGGLVAVVVYDGLSLFEYGCAVEVFGLPRPEMGDEWYRFATCSAEPGTLRGVGGIQVQADGGLELLSKAK
TIIVPGWRSIDAVVPPELCRALQKANKRGARVMSICTGAFVLAAAGLLDGKRATTHWRHATALAERYPEIRVEADVLYVD
AGDVLTSAGSAAGIDLCLHLIRRDFGPRAANQVARRLVMPPHREGGQAQYIAEPVSKRSSASLAPLLDTVRATLGEDWPI
VRMAKQAAMSGRTFQRHFVNMMAMPPGEWLLIERISRARVLLEETGLSMDDIAVQVGFGAAATLRNHFRTRLGTSPGYYR
RRFSASDEH

Sequences:

>Translated_329_residues
MSKNKTQTRANGGLVAVVVYDGLSLFEYGCAVEVFGLPRPEMGDEWYRFATCSAEPGTLRGVGGIQVQADGGLELLSKAK
TIIVPGWRSIDAVVPPELCRALQKANKRGARVMSICTGAFVLAAAGLLDGKRATTHWRHATALAERYPEIRVEADVLYVD
AGDVLTSAGSAAGIDLCLHLIRRDFGPRAANQVARRLVMPPHREGGQAQYIAEPVSKRSSASLAPLLDTVRATLGEDWPI
VRMAKQAAMSGRTFQRHFVNMMAMPPGEWLLIERISRARVLLEETGLSMDDIAVQVGFGAAATLRNHFRTRLGTSPGYYR
RRFSASDEH
>Mature_328_residues
SKNKTQTRANGGLVAVVVYDGLSLFEYGCAVEVFGLPRPEMGDEWYRFATCSAEPGTLRGVGGIQVQADGGLELLSKAKT
IIVPGWRSIDAVVPPELCRALQKANKRGARVMSICTGAFVLAAAGLLDGKRATTHWRHATALAERYPEIRVEADVLYVDA
GDVLTSAGSAAGIDLCLHLIRRDFGPRAANQVARRLVMPPHREGGQAQYIAEPVSKRSSASLAPLLDTVRATLGEDWPIV
RMAKQAAMSGRTFQRHFVNMMAMPPGEWLLIERISRARVLLEETGLSMDDIAVQVGFGAAATLRNHFRTRLGTSPGYYRR
RFSASDEH

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35833; Mature: 35701

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNKTQTRANGGLVAVVVYDGLSLFEYGCAVEVFGLPRPEMGDEWYRFATCSAEPGTLR
CCCCCCCHHCCCCEEEEEEECCHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCCCEE
GVGGIQVQADGGLELLSKAKTIIVPGWRSIDAVVPPELCRALQKANKRGARVMSICTGAF
CCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
VLAAAGLLDGKRATTHWRHATALAERYPEIRVEADVLYVDAGDVLTSAGSAAGIDLCLHL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHCCCCCHHHHHHHHH
IRRDFGPRAANQVARRLVMPPHREGGQAQYIAEPVSKRSSASLAPLLDTVRATLGEDWPI
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
VRMAKQAAMSGRTFQRHFVNMMAMPPGEWLLIERISRARVLLEETGLSMDDIAVQVGFGA
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCH
AATLRNHFRTRLGTSPGYYRRRFSASDEH
HHHHHHHHHHHCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
SKNKTQTRANGGLVAVVVYDGLSLFEYGCAVEVFGLPRPEMGDEWYRFATCSAEPGTLR
CCCCCCHHCCCCEEEEEEECCHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCCCEE
GVGGIQVQADGGLELLSKAKTIIVPGWRSIDAVVPPELCRALQKANKRGARVMSICTGAF
CCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
VLAAAGLLDGKRATTHWRHATALAERYPEIRVEADVLYVDAGDVLTSAGSAAGIDLCLHL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHCCCCCHHHHHHHHH
IRRDFGPRAANQVARRLVMPPHREGGQAQYIAEPVSKRSSASLAPLLDTVRATLGEDWPI
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
VRMAKQAAMSGRTFQRHFVNMMAMPPGEWLLIERISRARVLLEETGLSMDDIAVQVGFGA
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCH
AATLRNHFRTRLGTSPGYYRRRFSASDEH
HHHHHHHHHHHCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]