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The map label for this gene is ybhP [H]

Identifier: 73542888

GI number: 73542888

Start: 3516731

End: 3517510

Strand: Reverse

Name: ybhP [H]

Synonym: Reut_A3204

Alternate gene names: 73542888

Gene position: 3517510-3516731 (Counterclockwise)

Preceding gene: 73542889

Following gene: 73542885

Centisome position: 92.41

GC content: 66.28

Gene sequence:

>780_bases
ATGCGGTGTGCGCACCGCGCCGAACGAGAGAACGCGGTGAACGCGCCAGAAGCACCGCTTGCCGCCCGGCATGCCGAGAT
CGCGGTGGCGAGCTACAACATCCACGGCGGCGTCGGCACCGACGGTCATTTCGTGCCGAAACGCATCTGCGAGGTGCTGC
GCGAGTTGCGGGCCGACCTGGTCGCGCTACAGGAAGTGGAAACCCGCGCCACCGGCTTCGATATGCTCGGCTTCCTGTCC
AGGCATACTGGGCTGCATGCAATACCAGGCCCGACGCTGGTGCGCGACGATGGCGACTATGGCAATGCCTTGCTGACACG
CTATGCGCCGCTGCGCGTGCGGCACATCGATCTCAGTGTGAAAGGGCGCGAACCGCGCGGTGCCATCGATGCACAGCTGC
AATGCGACGCGATCGAAGCCGGCACGTTCGCGCTGCGTGTGATTGCCACGCACCTGGGCCTGCTGCCCAGCGAACGCCGC
GCACAGGTGCGCCGCCTGCTGACGGCGCTGGCCGAAGTACCCGCCCAGCCGACCATCTTGCTTGGCGATGTCAACGAATG
GTTTCTGTGGGGCCGGCCGTTGCGCTGGCTGCATGCCTATTTCGAACGCACGCCGCATGTGTCGACGTTTCCGTCGCGTT
GCCCGGTGCTCGCGCTCGACCGCATCTGGACATCGCCGCGCGCGCATCTCGTCGCAGTGTCGAGCCACCGCAGTCCGGTG
GCTCGGCTTGCATCCGATCATCTGCCGCTGCTCGCGCAGATGCGGCTGACTTCGCGGTAA

Upstream 100 bases:

>100_bases
TCGTGCCCGTGTGTGTGTGGGTGTTGCTGCGGCGAAGACGCGAGCGCCGCCGCCGGACCACACGTGCGCACCAGCCACAC
GACACAGGCGTGTGCCATTC

Downstream 100 bases:

>100_bases
GGCACGCTGTTCCAGAGTTGACGATCAGGTCTGTGAGGCGTCCTTCCGTGGACGGCGGACGGCCCTGAGCTTGCCGCTGC
TTCCACCACCGCAGAAGAAC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRCAHRAERENAVNAPEAPLAARHAEIAVASYNIHGGVGTDGHFVPKRICEVLRELRADLVALQEVETRATGFDMLGFLS
RHTGLHAIPGPTLVRDDGDYGNALLTRYAPLRVRHIDLSVKGREPRGAIDAQLQCDAIEAGTFALRVIATHLGLLPSERR
AQVRRLLTALAEVPAQPTILLGDVNEWFLWGRPLRWLHAYFERTPHVSTFPSRCPVLALDRIWTSPRAHLVAVSSHRSPV
ARLASDHLPLLAQMRLTSR

Sequences:

>Translated_259_residues
MRCAHRAERENAVNAPEAPLAARHAEIAVASYNIHGGVGTDGHFVPKRICEVLRELRADLVALQEVETRATGFDMLGFLS
RHTGLHAIPGPTLVRDDGDYGNALLTRYAPLRVRHIDLSVKGREPRGAIDAQLQCDAIEAGTFALRVIATHLGLLPSERR
AQVRRLLTALAEVPAQPTILLGDVNEWFLWGRPLRWLHAYFERTPHVSTFPSRCPVLALDRIWTSPRAHLVAVSSHRSPV
ARLASDHLPLLAQMRLTSR
>Mature_259_residues
MRCAHRAERENAVNAPEAPLAARHAEIAVASYNIHGGVGTDGHFVPKRICEVLRELRADLVALQEVETRATGFDMLGFLS
RHTGLHAIPGPTLVRDDGDYGNALLTRYAPLRVRHIDLSVKGREPRGAIDAQLQCDAIEAGTFALRVIATHLGLLPSERR
AQVRRLLTALAEVPAQPTILLGDVNEWFLWGRPLRWLHAYFERTPHVSTFPSRCPVLALDRIWTSPRAHLVAVSSHRSPV
ARLASDHLPLLAQMRLTSR

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=263, Percent_Identity=30.0380228136882, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28737; Mature: 28737

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCAHRAERENAVNAPEAPLAARHAEIAVASYNIHGGVGTDGHFVPKRICEVLRELRADL
CCCCHHHHHCCCCCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VALQEVETRATGFDMLGFLSRHTGLHAIPGPTLVRDDGDYGNALLTRYAPLRVRHIDLSV
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHCCCEEEEEEEEEE
KGREPRGAIDAQLQCDAIEAGTFALRVIATHLGLLPSERRAQVRRLLTALAEVPAQPTIL
ECCCCCCCCCCEEEECEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LGDVNEWFLWGRPLRWLHAYFERTPHVSTFPSRCPVLALDRIWTSPRAHLVAVSSHRSPV
EECCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCEEEEECCCCCHH
ARLASDHLPLLAQMRLTSR
HHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MRCAHRAERENAVNAPEAPLAARHAEIAVASYNIHGGVGTDGHFVPKRICEVLRELRADL
CCCCHHHHHCCCCCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VALQEVETRATGFDMLGFLSRHTGLHAIPGPTLVRDDGDYGNALLTRYAPLRVRHIDLSV
HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHCCCEEEEEEEEEE
KGREPRGAIDAQLQCDAIEAGTFALRVIATHLGLLPSERRAQVRRLLTALAEVPAQPTIL
ECCCCCCCCCCEEEECEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEE
LGDVNEWFLWGRPLRWLHAYFERTPHVSTFPSRCPVLALDRIWTSPRAHLVAVSSHRSPV
EECCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCEEEEECCCCCHH
ARLASDHLPLLAQMRLTSR
HHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]