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The map label for this gene is secY [H]

Identifier: 73542843

GI number: 73542843

Start: 3468757

End: 3470100

Strand: Reverse

Name: secY [H]

Synonym: Reut_A3159

Alternate gene names: 73542843

Gene position: 3470100-3468757 (Counterclockwise)

Preceding gene: 73542844

Following gene: 73542842

Centisome position: 91.16

GC content: 60.34

Gene sequence:

>1344_bases
TTGGCCACGGCGAAACCCAATGCAAGCGCGCAAGCCAGGAACACGGCGAAGTACGGCGACCTCAAGCGCCGGCTGATGTT
CCTGGTGTTGGCCCTGATCGTTTACCGCATCGGCGCACACATTCCGGTGCCGGGAATCGATCCGGATCAGCTCGCGAAGC
TTTTCCAGAGTCAGTCGGGTGGCATCCTCGGGATGTTCAACCTGTTCTCGGGCGGGGCGCTGTCGCGCTTTACCGTCTTC
GCGCTCGGCATCATGCCGTACATCTCGGCGTCGATCATCATGCAATTGCTGACGATCGTGCTGCCGCAGCTGGAGTCGCT
GAAGAAGGAAGGGCAGGCAGGTCAGCGCAAGATCACGCAGTACACGCGTTATGGCACCGTGGTTCTGGCCACGTTCCAGG
CGCTGTCGATCGCGGTCGCGCTGGAGTCGCAACCGGGGCTGGTGATCGATCCGGGCCTGATGTTCCGGGCCACGGCGGTG
ATCACGCTGGTGACCGGCACGATGTTCCTGATGTGGCTGGGTGAGCAGATCACCGAGCGTGGTCTGGGCAACGGCATCTC
GATCATCATTTTCGGCGGTATCGCAGCGGGCTTGCCCAACGCGATCGGCGGACTGTTCGAACTGGTTCGTACGGGCTCCA
TGAGCATCATCGCAGCGATCCTGATCGTCGCGATCGTGATCGGTGTGACCTTCGCCGTGGTGTTCGTCGAGCGTGGCCAG
CGCAAGATCCTGGTGAACTATGCCAAGCGTCAGGTCGGCAACAAGGTGTACGGCGGTCAGTCGTCGCACCTGCCGCTGAA
GCTGAACATGGCAGGGGTGATTCCGCCGATCTTCGCATCGTCGATCATCCTGTTCCCGGCGACGATTGCGGGCTGGTTCA
CGTCTCAGTCGACGGGTGCGGTCGGCCGGTTCGTCAAGGACCTGGCTGCCACGCTGTCGCCGGGACAGCCGGTGTATATC
CTGCTGTATGCGGCTGCGATTGTATTTTTCTGCTTCTTCTACACGGCTCTGGTTTACAACAGCCGGGAAGTGGCGGACAA
CCTGAAGAAAAGCGGTGCCTTCATTCCGGGCATTCGTCCGGGCGAGCAGACGACGCGCTACATCGACAAGATTCTGGTGC
GCCTGACGCTGGCTGGTGCGATCTACATCACACTGGTCTGCCTGTTGCCGGAATTCCTGGTGCTGCGCTGGAACGTTCCG
TTCTATTTTGGCGGAACCTCGCTGCTGATCATCGTGGTCGTCACGATGGACTTCATGGCTCAGGTGCAGTCCTACGTCAT
GTCGCAGCAGTATGAATCGCTGCTGAAGAAGGCGAACTTTAAGGGCAACCTGACCCTGCGCTGA

Upstream 100 bases:

>100_bases
CTGCTGGCGCCAAGGCCGCGATCGAAGCCGCTGGCGGCCAGATCGCAGAGTAAATCGGCAGCAATCATCGCAGCATAGGC
AGTCATAGTCGGAGCATCGT

Downstream 100 bases:

>100_bases
TTCAGATCGGTACAGACAAGGTATGGCGCGCACGGATCGTCTTCCGGACGAAGTGAGCGAACAGGAATTGAAGGAAGAGG
AAAATTATGAAAGTGCTGGC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MATAKPNASAQARNTAKYGDLKRRLMFLVLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGGILGMFNLFSGGALSRFTVF
ALGIMPYISASIIMQLLTIVLPQLESLKKEGQAGQRKITQYTRYGTVVLATFQALSIAVALESQPGLVIDPGLMFRATAV
ITLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGLPNAIGGLFELVRTGSMSIIAAILIVAIVIGVTFAVVFVERGQ
RKILVNYAKRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILFPATIAGWFTSQSTGAVGRFVKDLAATLSPGQPVYI
LLYAAAIVFFCFFYTALVYNSREVADNLKKSGAFIPGIRPGEQTTRYIDKILVRLTLAGAIYITLVCLLPEFLVLRWNVP
FYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGNLTLR

Sequences:

>Translated_447_residues
MATAKPNASAQARNTAKYGDLKRRLMFLVLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGGILGMFNLFSGGALSRFTVF
ALGIMPYISASIIMQLLTIVLPQLESLKKEGQAGQRKITQYTRYGTVVLATFQALSIAVALESQPGLVIDPGLMFRATAV
ITLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGLPNAIGGLFELVRTGSMSIIAAILIVAIVIGVTFAVVFVERGQ
RKILVNYAKRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILFPATIAGWFTSQSTGAVGRFVKDLAATLSPGQPVYI
LLYAAAIVFFCFFYTALVYNSREVADNLKKSGAFIPGIRPGEQTTRYIDKILVRLTLAGAIYITLVCLLPEFLVLRWNVP
FYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGNLTLR
>Mature_446_residues
ATAKPNASAQARNTAKYGDLKRRLMFLVLALIVYRIGAHIPVPGIDPDQLAKLFQSQSGGILGMFNLFSGGALSRFTVFA
LGIMPYISASIIMQLLTIVLPQLESLKKEGQAGQRKITQYTRYGTVVLATFQALSIAVALESQPGLVIDPGLMFRATAVI
TLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGLPNAIGGLFELVRTGSMSIIAAILIVAIVIGVTFAVVFVERGQR
KILVNYAKRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILFPATIAGWFTSQSTGAVGRFVKDLAATLSPGQPVYIL
LYAAAIVFFCFFYTALVYNSREVADNLKKSGAFIPGIRPGEQTTRYIDKILVRLTLAGAIYITLVCLLPEFLVLRWNVPF
YFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGNLTLR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=427, Percent_Identity=66.9789227166276, Blast_Score=535, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48429; Mature: 48298

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAKPNASAQARNTAKYGDLKRRLMFLVLALIVYRIGAHIPVPGIDPDQLAKLFQSQSG
CCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
GILGMFNLFSGGALSRFTVFALGIMPYISASIIMQLLTIVLPQLESLKKEGQAGQRKITQ
CEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YTRYGTVVLATFQALSIAVALESQPGLVIDPGLMFRATAVITLVTGTMFLMWLGEQITER
HHHHHHHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGNGISIIIFGGIAAGLPNAIGGLFELVRTGSMSIIAAILIVAIVIGVTFAVVFVERGQ
CCCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RKILVNYAKRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILFPATIAGWFTSQSTGA
HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
VGRFVKDLAATLSPGQPVYILLYAAAIVFFCFFYTALVYNSREVADNLKKSGAFIPGIRP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
GEQTTRYIDKILVRLTLAGAIYITLVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHHHHH
QVQSYVMSQQYESLLKKANFKGNLTLR
HHHHHHHHHHHHHHHHHCCCCCCCEEC
>Mature Secondary Structure 
ATAKPNASAQARNTAKYGDLKRRLMFLVLALIVYRIGAHIPVPGIDPDQLAKLFQSQSG
CCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
GILGMFNLFSGGALSRFTVFALGIMPYISASIIMQLLTIVLPQLESLKKEGQAGQRKITQ
CEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YTRYGTVVLATFQALSIAVALESQPGLVIDPGLMFRATAVITLVTGTMFLMWLGEQITER
HHHHHHHHHHHHHHHHEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGNGISIIIFGGIAAGLPNAIGGLFELVRTGSMSIIAAILIVAIVIGVTFAVVFVERGQ
CCCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RKILVNYAKRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIILFPATIAGWFTSQSTGA
HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
VGRFVKDLAATLSPGQPVYILLYAAAIVFFCFFYTALVYNSREVADNLKKSGAFIPGIRP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
GEQTTRYIDKILVRLTLAGAIYITLVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHHHHH
QVQSYVMSQQYESLLKKANFKGNLTLR
HHHHHHHHHHHHHHHHHCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]