Click here to switch to the map view.

The map label for this gene is yedY [H]

Identifier: 73542825

GI number: 73542825

Start: 3451652

End: 3452656

Strand: Reverse

Name: yedY [H]

Synonym: Reut_A3141

Alternate gene names: 73542825

Gene position: 3452656-3451652 (Counterclockwise)

Preceding gene: 73542826

Following gene: 73542824

Centisome position: 90.7

GC content: 64.68

Gene sequence:

>1005_bases
ATGCTGATTCCCTCCCCGAAGTGGTTGCGCGGTGATGACATCGCCGCCTCCGAGATCACGCCGCGCCATGTGTTCGCCAC
GCGCCGGCGCTTGCTGGCGCTCGCCGCGGCCGGCACCGCCGGTGCTGCGCTGAGTCCGTGGCTTGCGCGCGAGGCCCGCG
CCCAGGGCCGTCATGGGGCAAAGCTGGCGGCCACGCCCAACAGCGCTTTCGTGGTGACAGAAAAGCGTACGCCCTACGAG
GATGTCACCACCTACAACAACTTCTACGAATTTGGTACCGACAAGTCCGACCCGGCGCGCAATGCCGGCACGCTGCAGCC
GCGTCCGTGGCAGGTGGCGGTGGAAGGCTTGGTGAAAAAGCCCAAGGTCTATGACCTGGACGAGCTGCTCAAGCTCGCGC
CGATGGAAGAGCGCGTGTACCGCCTGCGCTGCGTGGAAGGCTGGTCGATGGTGATCCCGTGGCTTGGCTATCCGCTGGCT
GAGCTGATTCGCCGCGTGGAGCCGCAGCCGGGCGCGAAGTACGTGCAATTCATCACGCTCGCCGACAAGAAGCAGATGCC
CGGCATCAGCAGCTCGGTGCTGGACTGGCCCTACAGCGAAGGGCTGCGCATGGACGAGGCGATGCACCCGCTTGCTCTGC
TGACCTTTGGTCTTTATGGCGAGGTGCTGCCGAACCAGAACGGCGCGCCGGTGCGCATGGTGCTGCCATGGAAATACGGC
TTCAAGAGCGCGAAGTCGATCGTGAAGATCCGCTTCGTCGACAAGCAGCCGCCGACGAGCTGGAATCTGGCCGCGCCGCA
GGAATACGGCTTCTACTCGAACGTGAACCCGGATGTGGACCATCCGCGCTGGAGCCAGGCAACCGAGCGGCGCATTGGCG
AGGATAGCGGTGGCGGCGGCTTTGCCGCGCTGTTCGCGCCCAAGCGCAAGACGCTGCCGTTCAATGGCTACGGCCAGCAG
GTCGCGTCGCTGTACCAGGGCATGGATCTGAGGAAATTTTTCTGA

Upstream 100 bases:

>100_bases
TCGGCCGCCTCCTGCGAAAAAAAGCTGTCAGGAATGGCCAGCACCATCCGACCAACGGGAAGTCCAACTCCCGGGCCGTT
CGAAGTACCAAGGAACAACC

Downstream 100 bases:

>100_bases
TGGGCAGGGCTGACATGACGGTTTCGCAACCCACTTCGACACGCGCGCAAGGCGCGGTCCCGGGCAGCAGGGCCGGCGGG
CTGGCGGCGTTGCCCGCGGC

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLIPSPKWLRGDDIAASEITPRHVFATRRRLLALAAAGTAGAALSPWLAREARAQGRHGAKLAATPNSAFVVTEKRTPYE
DVTTYNNFYEFGTDKSDPARNAGTLQPRPWQVAVEGLVKKPKVYDLDELLKLAPMEERVYRLRCVEGWSMVIPWLGYPLA
ELIRRVEPQPGAKYVQFITLADKKQMPGISSSVLDWPYSEGLRMDEAMHPLALLTFGLYGEVLPNQNGAPVRMVLPWKYG
FKSAKSIVKIRFVDKQPPTSWNLAAPQEYGFYSNVNPDVDHPRWSQATERRIGEDSGGGGFAALFAPKRKTLPFNGYGQQ
VASLYQGMDLRKFF

Sequences:

>Translated_334_residues
MLIPSPKWLRGDDIAASEITPRHVFATRRRLLALAAAGTAGAALSPWLAREARAQGRHGAKLAATPNSAFVVTEKRTPYE
DVTTYNNFYEFGTDKSDPARNAGTLQPRPWQVAVEGLVKKPKVYDLDELLKLAPMEERVYRLRCVEGWSMVIPWLGYPLA
ELIRRVEPQPGAKYVQFITLADKKQMPGISSSVLDWPYSEGLRMDEAMHPLALLTFGLYGEVLPNQNGAPVRMVLPWKYG
FKSAKSIVKIRFVDKQPPTSWNLAAPQEYGFYSNVNPDVDHPRWSQATERRIGEDSGGGGFAALFAPKRKTLPFNGYGQQ
VASLYQGMDLRKFF
>Mature_334_residues
MLIPSPKWLRGDDIAASEITPRHVFATRRRLLALAAAGTAGAALSPWLAREARAQGRHGAKLAATPNSAFVVTEKRTPYE
DVTTYNNFYEFGTDKSDPARNAGTLQPRPWQVAVEGLVKKPKVYDLDELLKLAPMEERVYRLRCVEGWSMVIPWLGYPLA
ELIRRVEPQPGAKYVQFITLADKKQMPGISSSVLDWPYSEGLRMDEAMHPLALLTFGLYGEVLPNQNGAPVRMVLPWKYG
FKSAKSIVKIRFVDKQPPTSWNLAAPQEYGFYSNVNPDVDHPRWSQATERRIGEDSGGGGFAALFAPKRKTLPFNGYGQQ
VASLYQGMDLRKFF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=335, Percent_Identity=51.044776119403, Blast_Score=325, Evalue=2e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37402; Mature: 37402

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPSPKWLRGDDIAASEITPRHVFATRRRLLALAAAGTAGAALSPWLAREARAQGRHGA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
KLAATPNSAFVVTEKRTPYEDVTTYNNFYEFGTDKSDPARNAGTLQPRPWQVAVEGLVKK
EEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PKVYDLDELLKLAPMEERVYRLRCVEGWSMVIPWLGYPLAELIRRVEPQPGAKYVQFITL
CCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEE
ADKKQMPGISSSVLDWPYSEGLRMDEAMHPLALLTFGLYGEVLPNQNGAPVRMVLPWKYG
CCHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHC
FKSAKSIVKIRFVDKQPPTSWNLAAPQEYGFYSNVNPDVDHPRWSQATERRIGEDSGGGG
CHHHCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
FAALFAPKRKTLPFNGYGQQVASLYQGMDLRKFF
EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MLIPSPKWLRGDDIAASEITPRHVFATRRRLLALAAAGTAGAALSPWLAREARAQGRHGA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
KLAATPNSAFVVTEKRTPYEDVTTYNNFYEFGTDKSDPARNAGTLQPRPWQVAVEGLVKK
EEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PKVYDLDELLKLAPMEERVYRLRCVEGWSMVIPWLGYPLAELIRRVEPQPGAKYVQFITL
CCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEE
ADKKQMPGISSSVLDWPYSEGLRMDEAMHPLALLTFGLYGEVLPNQNGAPVRMVLPWKYG
CCHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHC
FKSAKSIVKIRFVDKQPPTSWNLAAPQEYGFYSNVNPDVDHPRWSQATERRIGEDSGGGG
CHHHCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
FAALFAPKRKTLPFNGYGQQVASLYQGMDLRKFF
EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]