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The map label for this gene is 73542781

Identifier: 73542781

GI number: 73542781

Start: 3408609

End: 3409817

Strand: Reverse

Name: 73542781

Synonym: Reut_A3097

Alternate gene names: NA

Gene position: 3409817-3408609 (Counterclockwise)

Preceding gene: 73542782

Following gene: 73542779

Centisome position: 89.58

GC content: 61.54

Gene sequence:

>1209_bases
ATGCGTCGCCCAAGCACTTGGGCAACCAAGATTTCCCAATCAGTTGACAAGGAAAGTGTCGATATGAAGATGAAACTGTT
TGCTGCTGCCGTCGCCGCTCTGGCCGCTGGCGGCGCGTATGCCCAGTCGAGCGTGACCCTGTACGGTGTGGTTGACGCTG
GTATCGAATATCAGAACAACCAGCCGGCCAACGTGTCGCAGGGTGTGGGCTCTGGTCACAGCGTGACCCGCATGATCTCG
GGCGGCCAGTCGGGCAGCCGTTGGGGCCTGCGTGGCGTGGAAGACCTGGGCGGTGGCCTGAAGGGTCTGTTCGTCCTGGA
AAGCGGTTTCACCGTTGACGATGGCAAGATGGGCAATGACAGCCGTCTGTTCGGTCGCCAGGCTTACGTCGGTCTGGGCA
GCCAGTACGGTCAGCTGACCCTGGGTCGTCACCAAACTCCGTTCTATGACTTCGGTCTGCAGTTCGACCCGATGGCCATT
GCTTCGAACTACTCGATCACCGCTCAGGACGGCGCTTTCGCGGGCCGTGCCGACAACTCGATCAAGTACATCGGTACGTT
CGGTGGCCTGACCGCCAACGCTCTGTATAGCTTTGGCTCGAACACCGGCGGCGCCACTGGCGTTTTCCAGGGCAACCAGG
GTGAAGTCCCGGGCACGTGGAAGATCGGTCGCGAATACAGCCTGGGTCTGACCTACGCTGCTGGCCCGTTCGCAGTTGGT
GCCGTCTATGACGAAACCAACCTGGGCTTCACCGCCAACCCGGACGCAACCGTGCGCCGCGCTTCGCTGGCTGGTACGTA
CGCCTTCGGTCCGGCCAAGCTGTTCGCTGGCTACCGTTGGGCCAAGGGTGTTGATCTGGGCACGATCCCGTTCCTGGCCA
ACACGAGCCTCCAGGCAATCAGCGGCGCGAAGGCGTCGTCGAACCTGTACTGGCTGGGCGCTGGCTACCAAATCACGCCG
GCATTCTCGCTGACCGGCGCGGCTTACTACCAAGACTTCCGTGGTGCCAAGGCTGATCCGTGGCTGTTCGTTGCTACGGC
TGACTACGCACTGTCGAAGCGCACCGACGCTTACCTGAGCCTGGCCTACGCCTACAACCGCGACAACTCGAATCTGGGTG
TTAGCGGCTTCGGCAAGACCAACGTCGACTCGACCGGCAAGGGCGACAGCCAGTTCGGCGCTACCGTTGGTATCCGCCAC
AAGTTCTAA

Upstream 100 bases:

>100_bases
CAGTCACAACAAAAAACGTCCGTATACGCAGTTTACGCCGAAAAAGCCTTCTGACGGCCGGGGACGCTGGCCCATAATAC
GCAGCAGACGTGAAAGTAAG

Downstream 100 bases:

>100_bases
TCTGAAGCGGGCCTGAGCCCGCAGTAGATTGGCTTGAAAAAACGCCGGCATCCGAAAGGGTGCCGGCGTTTTGTCTTGTC
TTCAGCCACGCGCATCTGCA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRRPSTWATKISQSVDKESVDMKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGIEYQNNQPANVSQGVGSGHSVTRMIS
GGQSGSRWGLRGVEDLGGGLKGLFVLESGFTVDDGKMGNDSRLFGRQAYVGLGSQYGQLTLGRHQTPFYDFGLQFDPMAI
ASNYSITAQDGAFAGRADNSIKYIGTFGGLTANALYSFGSNTGGATGVFQGNQGEVPGTWKIGREYSLGLTYAAGPFAVG
AVYDETNLGFTANPDATVRRASLAGTYAFGPAKLFAGYRWAKGVDLGTIPFLANTSLQAISGAKASSNLYWLGAGYQITP
AFSLTGAAYYQDFRGAKADPWLFVATADYALSKRTDAYLSLAYAYNRDNSNLGVSGFGKTNVDSTGKGDSQFGATVGIRH
KF

Sequences:

>Translated_402_residues
MRRPSTWATKISQSVDKESVDMKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGIEYQNNQPANVSQGVGSGHSVTRMIS
GGQSGSRWGLRGVEDLGGGLKGLFVLESGFTVDDGKMGNDSRLFGRQAYVGLGSQYGQLTLGRHQTPFYDFGLQFDPMAI
ASNYSITAQDGAFAGRADNSIKYIGTFGGLTANALYSFGSNTGGATGVFQGNQGEVPGTWKIGREYSLGLTYAAGPFAVG
AVYDETNLGFTANPDATVRRASLAGTYAFGPAKLFAGYRWAKGVDLGTIPFLANTSLQAISGAKASSNLYWLGAGYQITP
AFSLTGAAYYQDFRGAKADPWLFVATADYALSKRTDAYLSLAYAYNRDNSNLGVSGFGKTNVDSTGKGDSQFGATVGIRH
KF
>Mature_402_residues
MRRPSTWATKISQSVDKESVDMKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGIEYQNNQPANVSQGVGSGHSVTRMIS
GGQSGSRWGLRGVEDLGGGLKGLFVLESGFTVDDGKMGNDSRLFGRQAYVGLGSQYGQLTLGRHQTPFYDFGLQFDPMAI
ASNYSITAQDGAFAGRADNSIKYIGTFGGLTANALYSFGSNTGGATGVFQGNQGEVPGTWKIGREYSLGLTYAAGPFAVG
AVYDETNLGFTANPDATVRRASLAGTYAFGPAKLFAGYRWAKGVDLGTIPFLANTSLQAISGAKASSNLYWLGAGYQITP
AFSLTGAAYYQDFRGAKADPWLFVATADYALSKRTDAYLSLAYAYNRDNSNLGVSGFGKTNVDSTGKGDSQFGATVGIRH
KF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 42243; Mature: 42243

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPSTWATKISQSVDKESVDMKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGIEYQNN
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEECCC
QPANVSQGVGSGHSVTRMISGGQSGSRWGLRGVEDLGGGLKGLFVLESGFTVDDGKMGND
CCCCHHHCCCCCCCEEHEECCCCCCCCCCCCCHHHHCCCCEEEEEEECCCEECCCCCCCC
SRLFGRQAYVGLGSQYGQLTLGRHQTPFYDFGLQFDPMAIASNYSITAQDGAFAGRADNS
CCEECCEEEEECCCCCCEEEECCCCCCCEECCCEECCEEEECCCEEEECCCCCCCCCCCC
IKYIGTFGGLTANALYSFGSNTGGATGVFQGNQGEVPGTWKIGREYSLGLTYAAGPFAVG
EEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCEEEEEEEECCCCEEEE
AVYDETNLGFTANPDATVRRASLAGTYAFGPAKLFAGYRWAKGVDLGTIPFLANTSLQAI
EEEECCCCCEECCCCCCEEEEHHCCEEECCHHHHHCCCCEECCCCCCCCCEEECCCHHHH
SGAKASSNLYWLGAGYQITPAFSLTGAAYYQDFRGAKADPWLFVATADYALSKRTDAYLS
CCCCCCCCEEEEECCEEECCCEEECCHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCEEE
LAYAYNRDNSNLGVSGFGKTNVDSTGKGDSQFGATVGIRHKF
EEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRRPSTWATKISQSVDKESVDMKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGIEYQNN
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEECCC
QPANVSQGVGSGHSVTRMISGGQSGSRWGLRGVEDLGGGLKGLFVLESGFTVDDGKMGND
CCCCHHHCCCCCCCEEHEECCCCCCCCCCCCCHHHHCCCCEEEEEEECCCEECCCCCCCC
SRLFGRQAYVGLGSQYGQLTLGRHQTPFYDFGLQFDPMAIASNYSITAQDGAFAGRADNS
CCEECCEEEEECCCCCCEEEECCCCCCCEECCCEECCEEEECCCEEEECCCCCCCCCCCC
IKYIGTFGGLTANALYSFGSNTGGATGVFQGNQGEVPGTWKIGREYSLGLTYAAGPFAVG
EEEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCEEEEEEEECCCCEEEE
AVYDETNLGFTANPDATVRRASLAGTYAFGPAKLFAGYRWAKGVDLGTIPFLANTSLQAI
EEEECCCCCEECCCCCCEEEEHHCCEEECCHHHHHCCCCEECCCCCCCCCEEECCCHHHH
SGAKASSNLYWLGAGYQITPAFSLTGAAYYQDFRGAKADPWLFVATADYALSKRTDAYLS
CCCCCCCCEEEEECCEEECCCEEECCHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCEEE
LAYAYNRDNSNLGVSGFGKTNVDSTGKGDSQFGATVGIRHKF
EEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]