Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is ubiG
Identifier: 73542265
GI number: 73542265
Start: 2827041
End: 2827790
Strand: Direct
Name: ubiG
Synonym: Reut_A2580
Alternate gene names: 73542265
Gene position: 2827041-2827790 (Clockwise)
Preceding gene: 73542264
Following gene: 73542266
Centisome position: 74.27
GC content: 60.67
Gene sequence:
>750_bases ATGACGTCGCCTTCGCAAGTCCTGCCGGCCTCCGCTGGCAAACCCACCGGCCCCAATGCCGACCCCAAGGAAATCGACAA GTTCAGCGAACTGGCCCACCACTGGTGGGACCCGAACAGCGAGTTCAAGCCGCTGCACGACCTGAATCCGCTGCGGCTCG GTTGGATTGACGGCATTGCCGGACTGGCCGGTAAGAAAGTTGTGGATATCGGCTGCGGTGGCGGCATCCTGTCCGAGAGT ATGGCGCGCCTTGGCGCAAATGTGCGTGGAATTGACCTCTCGACGAAGGCGCTTCGGGTGGCCGACCTGCACAGCCTCGA GTCCGGCGTTGCCGTCAACTACGAGGAGATCGCCGCGGAAGCGCTGGCGGCGCGCGAACCGGGCAGCGTGGATGTCGTAA CTTGCATGGAAATGCTTGAACATGTGCCCGATCCCGAGTCGATCGTCCAGGCGTGCGCGACGCTAGTCCGCCCGGGCGGC CATGTCTTCGTCTCGACGATCAACCGCAACCTTAAGGCGTATCTGATGGCCGTCGTGGGCGCCGAGTACATCCTTCAAAT GCTGCCGCGTGGCACGCACGACTACGAGAAATTCATCACGCCATCGGAAATGGCGCGATTTGCCCGCAATGCCGGACTAG ATCTCGTGGAAATGCGCGGCATGACCTATAACCCGCTGTCGCAGATTTATTCACTGAGCCGTGATACGGACGTCAATTAC ATGATGGCGTTTCGCCGGGTTGCAGAATGA
Upstream 100 bases:
>100_bases AGGAAAGCCCAGCGCAAGCTGGGCTTTTTTTTTGGTACAGTGGCCAGACACCCTCCTATCTGCCGGCTCAGGCACTTCGT CCGTACCGGCACTGCAAACC
Downstream 100 bases:
>100_bases TGACTGGAATCGACGCCGTGTTTTTCGATCTCGACGGGACGCTCGCCGACACCGCTCCGGATCTTGCCGCAGCTGCCAAC CGGCTGGTCGTCGAGCATGG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTSPSQVLPASAGKPTGPNADPKEIDKFSELAHHWWDPNSEFKPLHDLNPLRLGWIDGIAGLAGKKVVDIGCGGGILSES MARLGANVRGIDLSTKALRVADLHSLESGVAVNYEEIAAEALAAREPGSVDVVTCMEMLEHVPDPESIVQACATLVRPGG HVFVSTINRNLKAYLMAVVGAEYILQMLPRGTHDYEKFITPSEMARFARNAGLDLVEMRGMTYNPLSQIYSLSRDTDVNY MMAFRRVAE
Sequences:
>Translated_249_residues MTSPSQVLPASAGKPTGPNADPKEIDKFSELAHHWWDPNSEFKPLHDLNPLRLGWIDGIAGLAGKKVVDIGCGGGILSES MARLGANVRGIDLSTKALRVADLHSLESGVAVNYEEIAAEALAAREPGSVDVVTCMEMLEHVPDPESIVQACATLVRPGG HVFVSTINRNLKAYLMAVVGAEYILQMLPRGTHDYEKFITPSEMARFARNAGLDLVEMRGMTYNPLSQIYSLSRDTDVNY MMAFRRVAE >Mature_248_residues TSPSQVLPASAGKPTGPNADPKEIDKFSELAHHWWDPNSEFKPLHDLNPLRLGWIDGIAGLAGKKVVDIGCGGGILSESM ARLGANVRGIDLSTKALRVADLHSLESGVAVNYEEIAAEALAAREPGSVDVVTCMEMLEHVPDPESIVQACATLVRPGGH VFVSTINRNLKAYLMAVVGAEYILQMLPRGTHDYEKFITPSEMARFARNAGLDLVEMRGMTYNPLSQIYSLSRDTDVNYM MAFRRVAE
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=236, Percent_Identity=34.7457627118644, Blast_Score=165, Evalue=3e-41, Organism=Escherichia coli, GI1788564, Length=229, Percent_Identity=56.3318777292576, Blast_Score=272, Evalue=1e-74, Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=34.1880341880342, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6324476, Length=300, Percent_Identity=31, Blast_Score=133, Evalue=3e-32, Organism=Drosophila melanogaster, GI281365311, Length=248, Percent_Identity=32.258064516129, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24585589, Length=269, Percent_Identity=30.4832713754647, Blast_Score=131, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_CUPPJ (Q46Y42)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296785.1 - ProteinModelPortal: Q46Y42 - SMR: Q46Y42 - GeneID: 3609604 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A2580 - NMPDR: fig|264198.3.peg.3334 - HOGENOM: HBG738842 - OMA: DHAEIAK - ProtClustDB: PRK05134 - BioCyc: REUT264198:REUT_A2580-MONOMER - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 27108; Mature: 26977
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSQVLPASAGKPTGPNADPKEIDKFSELAHHWWDPNSEFKPLHDLNPLRLGWIDGIA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHH GLAGKKVVDIGCGGGILSESMARLGANVRGIDLSTKALRVADLHSLESGVAVNYEEIAAE HHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH ALAAREPGSVDVVTCMEMLEHVPDPESIVQACATLVRPGGHVFVSTINRNLKAYLMAVVG HHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH AEYILQMLPRGTHDYEKFITPSEMARFARNAGLDLVEMRGMTYNPLSQIYSLSRDTDVNY HHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHCCCCCHHH MMAFRRVAE HHHHHHHCC >Mature Secondary Structure TSPSQVLPASAGKPTGPNADPKEIDKFSELAHHWWDPNSEFKPLHDLNPLRLGWIDGIA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHH GLAGKKVVDIGCGGGILSESMARLGANVRGIDLSTKALRVADLHSLESGVAVNYEEIAAE HHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH ALAAREPGSVDVVTCMEMLEHVPDPESIVQACATLVRPGGHVFVSTINRNLKAYLMAVVG HHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH AEYILQMLPRGTHDYEKFITPSEMARFARNAGLDLVEMRGMTYNPLSQIYSLSRDTDVNY HHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHCCCCCHHH MMAFRRVAE HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA