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The map label for this gene is ugpQ [H]

Identifier: 73541736

GI number: 73541736

Start: 2250300

End: 2251067

Strand: Reverse

Name: ugpQ [H]

Synonym: Reut_A2048

Alternate gene names: 73541736

Gene position: 2251067-2250300 (Counterclockwise)

Preceding gene: 73541737

Following gene: 73541735

Centisome position: 59.14

GC content: 68.36

Gene sequence:

>768_bases
ATGGATGCACCGCAATTCGCGCCCGTCACGGCGGCCAACTGGCCATACCCTCGCCACATCGCGCACCGCGGCGCCGGCAA
GCTGGCGCCCGAGAACACGCTGACTGCCGTCCGCCTCGGTGCGTCGTTTGGCTACCGGATGTTCGAGTTCGATGTGAAGC
TGAGCGCGGACGGCAAGGCGGTGCTGATGCACGATGCCATGCTGGATCGGACTACCAGCGGTACCGGCCGCGTCGATGCA
CTAACGTTCGGCGAGTTGGCTCAGCTCGATGCCGGAGCCTGGCACAGCCCCGGATACGCCGGCGAGCCGGTGCCGACCCT
GGCCGCCATCGCGCGTTATACGCGAGCCAACGGGCTTCTCTGCAATATCGAGATCAAGCCTGTCCCCGGGCGGGAAACGG
AAACCGGCGCTGCAGTCGCGCTGGACGCCCGGTCCATGTGGCGCGGAGCCGACGTGCCGCCCCTGCTGTCGTCGTTTTCG
GAAGAGGCGCTCGCCGCGGCGCGGCTGGCCGTGCCGGAGCTTCCGCGCGCCTTGCTGGTCGATGTGCTGCCGCCGGACTG
GCTCGCCCGCGCGCAGGCGCTCGGTTGCGTCGCGCTGGATGCGAACCACAAGGGGCTCGATGCTCAGGTCATTGCCGCCG
CGCACTCCGCGGGACTGAAGGTGCTCAGCTATACCGTGAACGATCCCGGGCGCGCTGCCGAACTGATCGGCTGGGGGCTC
GACGGACTGATTACGGACGCTGTCGACGCCATTTCCCCGGCCGACTAA

Upstream 100 bases:

>100_bases
ATGCCCGGGTGCGCGCCGGCGACAAGCTGCCGGTGACATCGTCGCCGGATCATCTTCACTTCTTCGACGCCCAATCGGGC
AAGCGCATCGAGGCCTGAGC

Downstream 100 bases:

>100_bases
TTGTTGCGGATCTGTTGTTTGAGACGCGAATTAATGCGGCGTGTAATACCACATCGCGAAAAGTCCACATAGCGCATAAG
CAAACGTGCTATTCTTACCG

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDAPQFAPVTAANWPYPRHIAHRGAGKLAPENTLTAVRLGASFGYRMFEFDVKLSADGKAVLMHDAMLDRTTSGTGRVDA
LTFGELAQLDAGAWHSPGYAGEPVPTLAAIARYTRANGLLCNIEIKPVPGRETETGAAVALDARSMWRGADVPPLLSSFS
EEALAAARLAVPELPRALLVDVLPPDWLARAQALGCVALDANHKGLDAQVIAAAHSAGLKVLSYTVNDPGRAAELIGWGL
DGLITDAVDAISPAD

Sequences:

>Translated_255_residues
MDAPQFAPVTAANWPYPRHIAHRGAGKLAPENTLTAVRLGASFGYRMFEFDVKLSADGKAVLMHDAMLDRTTSGTGRVDA
LTFGELAQLDAGAWHSPGYAGEPVPTLAAIARYTRANGLLCNIEIKPVPGRETETGAAVALDARSMWRGADVPPLLSSFS
EEALAAARLAVPELPRALLVDVLPPDWLARAQALGCVALDANHKGLDAQVIAAAHSAGLKVLSYTVNDPGRAAELIGWGL
DGLITDAVDAISPAD
>Mature_255_residues
MDAPQFAPVTAANWPYPRHIAHRGAGKLAPENTLTAVRLGASFGYRMFEFDVKLSADGKAVLMHDAMLDRTTSGTGRVDA
LTFGELAQLDAGAWHSPGYAGEPVPTLAAIARYTRANGLLCNIEIKPVPGRETETGAAVALDARSMWRGADVPPLLSSFS
EEALAAARLAVPELPRALLVDVLPPDWLARAQALGCVALDANHKGLDAQVIAAAHSAGLKVLSYTVNDPGRAAELIGWGL
DGLITDAVDAISPAD

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=151, Percent_Identity=33.112582781457, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI284055245, Length=101, Percent_Identity=39.6039603960396, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI284055240, Length=101, Percent_Identity=39.6039603960396, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI284055242, Length=101, Percent_Identity=39.6039603960396, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI21361649, Length=101, Percent_Identity=39.6039603960396, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1789858, Length=242, Percent_Identity=50.8264462809917, Blast_Score=251, Evalue=3e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26736; Mature: 26736

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPQFAPVTAANWPYPRHIAHRGAGKLAPENTLTAVRLGASFGYRMFEFDVKLSADGKA
CCCCCCCCEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCE
VLMHDAMLDRTTSGTGRVDALTFGELAQLDAGAWHSPGYAGEPVPTLAAIARYTRANGLL
EEEEHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
CNIEIKPVPGRETETGAAVALDARSMWRGADVPPLLSSFSEEALAAARLAVPELPRALLV
EEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEE
DVLPPDWLARAQALGCVALDANHKGLDAQVIAAAHSAGLKVLSYTVNDPGRAAELIGWGL
CCCCCHHHHHHHHHEEEEECCCCCCCCHHEEEHHHHCCEEEEEEEECCCCCHHHHHHCCH
DGLITDAVDAISPAD
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MDAPQFAPVTAANWPYPRHIAHRGAGKLAPENTLTAVRLGASFGYRMFEFDVKLSADGKA
CCCCCCCCEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCE
VLMHDAMLDRTTSGTGRVDALTFGELAQLDAGAWHSPGYAGEPVPTLAAIARYTRANGLL
EEEEHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
CNIEIKPVPGRETETGAAVALDARSMWRGADVPPLLSSFSEEALAAARLAVPELPRALLV
EEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEE
DVLPPDWLARAQALGCVALDANHKGLDAQVIAAAHSAGLKVLSYTVNDPGRAAELIGWGL
CCCCCHHHHHHHHHEEEEECCCCCCCCHHEEEHHHHCCEEEEEEEECCCCCHHHHHHCCH
DGLITDAVDAISPAD
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]