Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73541626
Identifier: 73541626
GI number: 73541626
Start: 2126240
End: 2127097
Strand: Reverse
Name: 73541626
Synonym: Reut_A1937
Alternate gene names: NA
Gene position: 2127097-2126240 (Counterclockwise)
Preceding gene: 73541627
Following gene: 73541625
Centisome position: 55.88
GC content: 67.72
Gene sequence:
>858_bases ATGAGCCGACGCGCGCAGTTCCTGGAAGTGCTGGGGATTCCGACCGAGTGGATTTCGCGCAGGCCGCCTGCCGCCGCTGA AGGCGGCACTGTCGAGGCGGACTTGCCGACCGCTATGGCCGCTGAACCGGAAGAACCAGCGGAAACGATATCCGTGTCGG CGCAGACATTGGTCGACATGGAGGCAGTCGGGGTCGTCGAGGTCGCGGAGGCGTTCGCAGAGCCGTTGCCGCCAGCGGTT GTCGATCTGCCGGTCATCGCCCCGGTTTCGGACCGGGCAGCTGCTATTGCCGCCATGGACTGGCCCACGCTGGACGCCGC CGTGGCCGCGTGCGAGGCCTGCGGGCTGTGCAGCACGCGCACCAATACCGTGTTCGGCGTGGGCGACCGCGAAGCGGAAT GGATGCTCATCGGCGAGGCCCCTGGCGAGAACGAAGACCTGCAGGGCGAGCCGTTCGTCGGCCAGGCCGGCAAGCTGCTC GACAACATGCTGGCGTCGCTCGGGCTCAGGCGCGGCCGCAACGTGTTCATCGCCAATGTGCTGAAGTGCCGTCCGCCGGG CAACCGCAATCCGGAACCGGCCGAAGTCGATCAGTGCGAGCCGTTCCTGAAACGGCAGATTGCGCTGGTGCGGCCCAAGG TCATCGTCGTACTGGGCCGCTTTGCCGCGCAGTCGCTGCTGCGCACCACGACGCCGATCGGCAAGCTGCGCGGTACCGTC CACAGCTACGAGGGGATTCCCGTGGTGGTGACCTACCATCCCGCCTACCTGCTGCGCACCCTGACCGACAAGGCGCGCGC ATGGGAAGACCTGTGCCTGGCCCGAGAGGTGCACGATCGTGCGGGAGCCCAGGCCTGA
Upstream 100 bases:
>100_bases TCGAGATCGGACGTCGCAAAGGCTATTACCCGGCAACCGGTAACGCTCGCGAAGACGCACTGGTGCTGCGTCGGGCCTGG TCCGGCGGGGAGGACGCAGC
Downstream 100 bases:
>100_bases TCTCCCGATAAGCCACGGCGGCAACGGCGTGCATACGCCGGCGCTGCCGCTGTGGCGTCAGGCCGCATCGCAACGCGCCC GCGACCTGGCCTGGTGCACG
Product: Phage SPO1 DNA polymerase-related protein
Products: diphosphate; DNAn+1
Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSRRAQFLEVLGIPTEWISRRPPAAAEGGTVEADLPTAMAAEPEEPAETISVSAQTLVDMEAVGVVEVAEAFAEPLPPAV VDLPVIAPVSDRAAAIAAMDWPTLDAAVAACEACGLCSTRTNTVFGVGDREAEWMLIGEAPGENEDLQGEPFVGQAGKLL DNMLASLGLRRGRNVFIANVLKCRPPGNRNPEPAEVDQCEPFLKRQIALVRPKVIVVLGRFAAQSLLRTTTPIGKLRGTV HSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGAQA
Sequences:
>Translated_285_residues MSRRAQFLEVLGIPTEWISRRPPAAAEGGTVEADLPTAMAAEPEEPAETISVSAQTLVDMEAVGVVEVAEAFAEPLPPAV VDLPVIAPVSDRAAAIAAMDWPTLDAAVAACEACGLCSTRTNTVFGVGDREAEWMLIGEAPGENEDLQGEPFVGQAGKLL DNMLASLGLRRGRNVFIANVLKCRPPGNRNPEPAEVDQCEPFLKRQIALVRPKVIVVLGRFAAQSLLRTTTPIGKLRGTV HSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGAQA >Mature_284_residues SRRAQFLEVLGIPTEWISRRPPAAAEGGTVEADLPTAMAAEPEEPAETISVSAQTLVDMEAVGVVEVAEAFAEPLPPAVV DLPVIAPVSDRAAAIAAMDWPTLDAAVAACEACGLCSTRTNTVFGVGDREAEWMLIGEAPGENEDLQGEPFVGQAGKLLD NMLASLGLRRGRNVFIANVLKCRPPGNRNPEPAEVDQCEPFLKRQIALVRPKVIVVLGRFAAQSLLRTTTPIGKLRGTVH SYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGAQA
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.7
Molecular weight: Translated: 30534; Mature: 30403
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAQFLEVLGIPTEWISRRPPAAAEGGTVEADLPTAMAAEPEEPAETISVSAQTLVDM CCCHHHHHHHHCCCHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHH EAVGVVEVAEAFAEPLPPAVVDLPVIAPVSDRAAAIAAMDWPTLDAAVAACEACGLCSTR HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHEEEECCCCHHHHHHHHHHHHCCCCCC TNTVFGVGDREAEWMLIGEAPGENEDLQGEPFVGQAGKLLDNMLASLGLRRGRNVFIANV CCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHE LKCRPPGNRNPEPAEVDQCEPFLKRQIALVRPKVIVVLGRFAAQSLLRTTTPIGKLRGTV EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC HSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGAQA CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRRAQFLEVLGIPTEWISRRPPAAAEGGTVEADLPTAMAAEPEEPAETISVSAQTLVDM CCHHHHHHHHCCCHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHH EAVGVVEVAEAFAEPLPPAVVDLPVIAPVSDRAAAIAAMDWPTLDAAVAACEACGLCSTR HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHEEEECCCCHHHHHHHHHHHHCCCCCC TNTVFGVGDREAEWMLIGEAPGENEDLQGEPFVGQAGKLLDNMLASLGLRRGRNVFIANV CCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHE LKCRPPGNRNPEPAEVDQCEPFLKRQIALVRPKVIVVLGRFAAQSLLRTTTPIGKLRGTV EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC HSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGAQA CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxynucleoside triphosphate; DNAn
Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA