Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is gsiB [H]
Identifier: 73541615
GI number: 73541615
Start: 2111766
End: 2113322
Strand: Reverse
Name: gsiB [H]
Synonym: Reut_A1926
Alternate gene names: 73541615
Gene position: 2113322-2111766 (Counterclockwise)
Preceding gene: 73541616
Following gene: 73541614
Centisome position: 55.52
GC content: 63.07
Gene sequence:
>1557_bases ATGTCTGCATCGATGGTTTCGCCCAGGCTGGTGGCCGGGCTGCTTGTGGCCGGCGCGATAGGCGCGCTGGCGCCGGTGTC CGCTTTTGCCGCCAAGGATGCGGTAATGGCTGTCGCTTCCACGTTCACCACGCTGGACCCGTACGATTCGAACGACACGC TGTCGCAGGCCGTAACCAAAAGCTTCTACCAGGGCCTGTTCGGCCTGGACAAGGACATGAAGCTGGTCAACGTGCTGGCC GAAAGCTATGACGTCAGCAAGGACGGCCTGACCTACACGATCAAGCTCAAGAAGGGCATCAAGTTCCACGACGGCACCCC CTTCGACGCCGCCGCCGTGAAGGCCAACCTTGACCGCGTGACCAACCCGGCCAACAAGCTCAAGCGCTATACGCTGTTCA ACCGCGTCGCCAAGACCGATGTGGTGGACAGCAGCACGGTAAAGGTCACGCTGAAGGAGCCGTTCTCGCCGTTCATCAAC GTGCTGGCCCACCCGTCGGCCGTGATGATCTCGCCCGTGGCGCTGCAGAAGTACGGCAAGGAGATTGCCTTCCATCCGGT CGGCACGGGCCCGTTCGAGTTCGTCGAGTGGAAGCAGCCCGATCACCTGAAGGGCAAGAAATTCGCAGGCTACTGGAAGA CTGGTTATCCGAAGATCGACACCGTCACCTGGAAGCCGGTGGTGGACAACAACACCCGCGCGGCCATCATGCAGACCGGC GAGGCCGACTTTGCCTTCAGCATCCCGTTCGAGCAGGCCGCGGTGCTGAAGAACAGCCCCAAGGTGGACCTGATCGCGGC GCCGTCGATTATCCAGCGCTACCTGAGCCTGAACACCACGGTCAAGCCGTTCAACGACCCGAAGGTGCGCCAGGCCATCA ACTACGCAATCAATAAGGACGCGCTGGCCAAGGTGGCCTTCGCTGGCTACGCCGTGCCGGCCGAAGGCGTGGTGCCGCCG GGCGTGGACTATGCCGAGAAGCTGGGCCCGTGGCCGTATGACCCGGCCAAGGCGCGCGCGCTGCTGAAGGAAGCCGGCTA CCCGAACGGCTTCGAGACCACGCTGTGGTCGGCCTATAACCACACCACCGCGCAGAAGGTGATCCAGTTCGTGCAGCAGC AGCTGCAGCAGGTCGGCATCAAGGCCAGCGTGCAGGCGCTGGAAGCCGGCCAGCGCGTGGAGAAGGTGGAAAGCGTGCAG AAGCCGGAAGATGCCGGCGTGCGCATCTACTACATCGGCTGGTCGTCGTCGACCGGTGAGTCGGACTGGGCGCTGCGTCC GCTGCTGGCCTCGGAATCGATGCCGCCGAAGTTGCTGAACACCGCGTACTACAAGAACGACCAGGTCGATGCCGACATCG CCGGCGCGCTGCGCACGACCGATCGCGGCGAGAAGGCCAAGCTGTACAAGGACGCGCAGGAACGCATCTGGAAGGATGCG CCGTGGGCCTTCCTGGTGACCGAGAAGGTGCTGTACGCGCGCAGCAAGCGCCTGACCGGTGCGTATGTGATGCCCGATGG CTCGTTCAATTTCGACGACATCGATATCAAGCAGTAA
Upstream 100 bases:
>100_bases CACTGGTGCCTGTCGCGGACAGCCGTGGAATCGGTCACTTTGTCGCGCGGCACGCCATTGGCGGTGCCTACTGAAATCGG TTTATCCAAGGAGAATCAAG
Downstream 100 bases:
>100_bases GCCTGCGGAAAGCGCGCCGCTACCGCGGCGCGCACCGGGTAGCAAGCAGTAAGCCGAACGTGGCCGCCTGTCCCATCGCA GGGGCATGGACAGGCGGCCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MSASMVSPRLVAGLLVAGAIGALAPVSAFAAKDAVMAVASTFTTLDPYDSNDTLSQAVTKSFYQGLFGLDKDMKLVNVLA ESYDVSKDGLTYTIKLKKGIKFHDGTPFDAAAVKANLDRVTNPANKLKRYTLFNRVAKTDVVDSSTVKVTLKEPFSPFIN VLAHPSAVMISPVALQKYGKEIAFHPVGTGPFEFVEWKQPDHLKGKKFAGYWKTGYPKIDTVTWKPVVDNNTRAAIMQTG EADFAFSIPFEQAAVLKNSPKVDLIAAPSIIQRYLSLNTTVKPFNDPKVRQAINYAINKDALAKVAFAGYAVPAEGVVPP GVDYAEKLGPWPYDPAKARALLKEAGYPNGFETTLWSAYNHTTAQKVIQFVQQQLQQVGIKASVQALEAGQRVEKVESVQ KPEDAGVRIYYIGWSSSTGESDWALRPLLASESMPPKLLNTAYYKNDQVDADIAGALRTTDRGEKAKLYKDAQERIWKDA PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDDIDIKQ
Sequences:
>Translated_518_residues MSASMVSPRLVAGLLVAGAIGALAPVSAFAAKDAVMAVASTFTTLDPYDSNDTLSQAVTKSFYQGLFGLDKDMKLVNVLA ESYDVSKDGLTYTIKLKKGIKFHDGTPFDAAAVKANLDRVTNPANKLKRYTLFNRVAKTDVVDSSTVKVTLKEPFSPFIN VLAHPSAVMISPVALQKYGKEIAFHPVGTGPFEFVEWKQPDHLKGKKFAGYWKTGYPKIDTVTWKPVVDNNTRAAIMQTG EADFAFSIPFEQAAVLKNSPKVDLIAAPSIIQRYLSLNTTVKPFNDPKVRQAINYAINKDALAKVAFAGYAVPAEGVVPP GVDYAEKLGPWPYDPAKARALLKEAGYPNGFETTLWSAYNHTTAQKVIQFVQQQLQQVGIKASVQALEAGQRVEKVESVQ KPEDAGVRIYYIGWSSSTGESDWALRPLLASESMPPKLLNTAYYKNDQVDADIAGALRTTDRGEKAKLYKDAQERIWKDA PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDDIDIKQ >Mature_517_residues SASMVSPRLVAGLLVAGAIGALAPVSAFAAKDAVMAVASTFTTLDPYDSNDTLSQAVTKSFYQGLFGLDKDMKLVNVLAE SYDVSKDGLTYTIKLKKGIKFHDGTPFDAAAVKANLDRVTNPANKLKRYTLFNRVAKTDVVDSSTVKVTLKEPFSPFINV LAHPSAVMISPVALQKYGKEIAFHPVGTGPFEFVEWKQPDHLKGKKFAGYWKTGYPKIDTVTWKPVVDNNTRAAIMQTGE ADFAFSIPFEQAAVLKNSPKVDLIAAPSIIQRYLSLNTTVKPFNDPKVRQAINYAINKDALAKVAFAGYAVPAEGVVPPG VDYAEKLGPWPYDPAKARALLKEAGYPNGFETTLWSAYNHTTAQKVIQFVQQQLQQVGIKASVQALEAGQRVEKVESVQK PEDAGVRIYYIGWSSSTGESDWALRPLLASESMPPKLLNTAYYKNDQVDADIAGALRTTDRGEKAKLYKDAQERIWKDAP WAFLVTEKVLYARSKRLTGAYVMPDGSFNFDDIDIKQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=506, Percent_Identity=64.6245059288538, Blast_Score=700, Evalue=0.0, Organism=Escherichia coli, GI1789966, Length=470, Percent_Identity=30.4255319148936, Blast_Score=199, Evalue=3e-52, Organism=Escherichia coli, GI1787495, Length=506, Percent_Identity=25.4940711462451, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1787762, Length=492, Percent_Identity=26.6260162601626, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1789887, Length=459, Percent_Identity=26.5795206971678, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI1787551, Length=544, Percent_Identity=25.1838235294118, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1789397, Length=467, Percent_Identity=22.6980728051392, Blast_Score=99, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 56844; Mature: 56713
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS01040 SBP_BACTERIAL_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASMVSPRLVAGLLVAGAIGALAPVSAFAAKDAVMAVASTFTTLDPYDSNDTLSQAVTK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH SFYQGLFGLDKDMKLVNVLAESYDVSKDGLTYTIKLKKGIKFHDGTPFDAAAVKANLDRV HHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCCCHHHHHHHHHHH TNPANKLKRYTLFNRVAKTDVVDSSTVKVTLKEPFSPFINVLAHPSAVMISPVALQKYGK CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHEECHHHHHHCCC EIAFHPVGTGPFEFVEWKQPDHLKGKKFAGYWKTGYPKIDTVTWKPVVDNNTRAAIMQTG EEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCEEEEECC EADFAFSIPFEQAAVLKNSPKVDLIAAPSIIQRYLSLNTTVKPFNDPKVRQAINYAINKD CCCEEEECCHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH ALAKVAFAGYAVPAEGVVPPGVDYAEKLGPWPYDPAKARALLKEAGYPNGFETTLWSAYN HHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC HTTAQKVIQFVQQQLQQVGIKASVQALEAGQRVEKVESVQKPEDAGVRIYYIGWSSSTGE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC SDWALRPLLASESMPPKLLNTAYYKNDQVDADIAGALRTTDRGEKAKLYKDAQERIWKDA CCCCCHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDDIDIKQ CEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure SASMVSPRLVAGLLVAGAIGALAPVSAFAAKDAVMAVASTFTTLDPYDSNDTLSQAVTK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH SFYQGLFGLDKDMKLVNVLAESYDVSKDGLTYTIKLKKGIKFHDGTPFDAAAVKANLDRV HHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCCCHHHHHHHHHHH TNPANKLKRYTLFNRVAKTDVVDSSTVKVTLKEPFSPFINVLAHPSAVMISPVALQKYGK CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHEECHHHHHHCCC EIAFHPVGTGPFEFVEWKQPDHLKGKKFAGYWKTGYPKIDTVTWKPVVDNNTRAAIMQTG EEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCEEEEECC EADFAFSIPFEQAAVLKNSPKVDLIAAPSIIQRYLSLNTTVKPFNDPKVRQAINYAINKD CCCEEEECCHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH ALAKVAFAGYAVPAEGVVPPGVDYAEKLGPWPYDPAKARALLKEAGYPNGFETTLWSAYN HHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC HTTAQKVIQFVQQQLQQVGIKASVQALEAGQRVEKVESVQKPEDAGVRIYYIGWSSSTGE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC SDWALRPLLASESMPPKLLNTAYYKNDQVDADIAGALRTTDRGEKAKLYKDAQERIWKDA CCCCCHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDDIDIKQ CEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA