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The map label for this gene is tsf [H]

Identifier: 73541569

GI number: 73541569

Start: 2056729

End: 2057607

Strand: Reverse

Name: tsf [H]

Synonym: Reut_A1880

Alternate gene names: 73541569

Gene position: 2057607-2056729 (Counterclockwise)

Preceding gene: 73541570

Following gene: 73541568

Centisome position: 54.05

GC content: 62.8

Gene sequence:

>879_bases
ATGGCGGCAATTACCGCAAGCATGGTGGCAGAACTGCGCGCGAAGACCGACGCGCCGATGATGGAATGCAAGAAGGCCCT
GACCGAGGCCGACGGCGATCTGAACAAGGCTGAAGAGCTGCTGCGCGTCAAGCTGGGCAATAAGGCCAGCAAGGCTGCAT
CGCGCGTGACCGCTGAGGGCGTGGTCGCTTCGTTCATCGACGGCACCACCGGTGTCCTGGTCGAATTGAACTGCGAGACC
GATTTCGTCTCCAAGAACGACGACTTCCTGGCGTTCTCGGCCAAGGTCGCCGAACTGATCGCCAAGCAGAACCCGGCCGA
CGTGGCTGCGCTGTCGGCGCTGGAACTCGACGGCGTGAGTGTTGAAGCCACCCGTACCGCCCTGATCGGCAAGATCGGCG
AGAACCTGACGATCCGCCGCTTCGTGCGCTACGCCAACGGTGGCAAGCTGGTTTCGTACCTGCACGGCACCCGTATCGGC
GTGATGGTCGAGTTCGACGGCGACGAAGCCGCCGCCAAGGACGTCGCCATGCACGTGGCCGCCATGAAACCGGTGTCGCT
GTCGGCTGAGCAGGTTCCCGCGGACCTGATCGCCAAGGAGCGCAGCATCGCCGAGCAAAAGGCTGCCGAGTCGGGCAAGC
CGGCTGAAATCGCCGCCAAGATGGTGGAAGGTTCGGTCCAGAAGTACCTGAAGGAAGTGTCGCTGTTCAACCAGCCGTTC
GTGAAGAACGACAAGCAGACCGTCGAGCAGATGCTCAAGGCTGCCAACACGACCGTGAAGGGCTTCACGCTGTATGTCGT
GGGCGAAGGCATCGAGAAGAAGCAGGACGACTTCGCTGCCGAAGTGGCCGCGCAGGTGGCCGCTGCCCAGAAGGGCTGA

Upstream 100 bases:

>100_bases
CGCCGCAGGCAAGCTCTGCCGCGGGTGAAGCTGTACACCCCCGGCCGGTTGCGAGCCAGGAAACTGGCGCACCCGGCGCG
AACCATTCAAGGAGTGACAA

Downstream 100 bases:

>100_bases
TGTCCGGGGCGGCCGGTGCCTCCCGTCAGGGTTGGCACGCCGCCTATAATGCCGAAGGGGCGCCGCAAGGTGCCCCTCTG
TGTAAGTGGGACCGAAGCAG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDLNKAEELLRVKLGNKASKAASRVTAEGVVASFIDGTTGVLVELNCET
DFVSKNDDFLAFSAKVAELIAKQNPADVAALSALELDGVSVEATRTALIGKIGENLTIRRFVRYANGGKLVSYLHGTRIG
VMVEFDGDEAAAKDVAMHVAAMKPVSLSAEQVPADLIAKERSIAEQKAAESGKPAEIAAKMVEGSVQKYLKEVSLFNQPF
VKNDKQTVEQMLKAANTTVKGFTLYVVGEGIEKKQDDFAAEVAAQVAAAQKG

Sequences:

>Translated_292_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDLNKAEELLRVKLGNKASKAASRVTAEGVVASFIDGTTGVLVELNCET
DFVSKNDDFLAFSAKVAELIAKQNPADVAALSALELDGVSVEATRTALIGKIGENLTIRRFVRYANGGKLVSYLHGTRIG
VMVEFDGDEAAAKDVAMHVAAMKPVSLSAEQVPADLIAKERSIAEQKAAESGKPAEIAAKMVEGSVQKYLKEVSLFNQPF
VKNDKQTVEQMLKAANTTVKGFTLYVVGEGIEKKQDDFAAEVAAQVAAAQKG
>Mature_291_residues
AAITASMVAELRAKTDAPMMECKKALTEADGDLNKAEELLRVKLGNKASKAASRVTAEGVVASFIDGTTGVLVELNCETD
FVSKNDDFLAFSAKVAELIAKQNPADVAALSALELDGVSVEATRTALIGKIGENLTIRRFVRYANGGKLVSYLHGTRIGV
MVEFDGDEAAAKDVAMHVAAMKPVSLSAEQVPADLIAKERSIAEQKAAESGKPAEIAAKMVEGSVQKYLKEVSLFNQPFV
KNDKQTVEQMLKAANTTVKGFTLYVVGEGIEKKQDDFAAEVAAQVAAAQKG

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=228, Percent_Identity=31.140350877193, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI291084500, Length=249, Percent_Identity=28.9156626506024, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI291084498, Length=100, Percent_Identity=41, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI291084502, Length=100, Percent_Identity=41, Blast_Score=71, Evalue=9e-13,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=50.1754385964912, Blast_Score=242, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17561440, Length=292, Percent_Identity=26.027397260274, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19921466, Length=286, Percent_Identity=31.4685314685315, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 30956; Mature: 30825

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITASMVAELRAKTDAPMMECKKALTEADGDLNKAEELLRVKLGNKASKAASRVTAEG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFIDGTTGVLVELNCETDFVSKNDDFLAFSAKVAELIAKQNPADVAALSALELDGVS
HHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHEECCCE
VEATRTALIGKIGENLTIRRFVRYANGGKLVSYLHGTRIGVMVEFDGDEAAAKDVAMHVA
EHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
AMKPVSLSAEQVPADLIAKERSIAEQKAAESGKPAEIAAKMVEGSVQKYLKEVSLFNQPF
HCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VKNDKQTVEQMLKAANTTVKGFTLYVVGEGIEKKQDDFAAEVAAQVAAAQKG
CCCCHHHHHHHHHHHCCEECEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAITASMVAELRAKTDAPMMECKKALTEADGDLNKAEELLRVKLGNKASKAASRVTAEG
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFIDGTTGVLVELNCETDFVSKNDDFLAFSAKVAELIAKQNPADVAALSALELDGVS
HHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHEECCCE
VEATRTALIGKIGENLTIRRFVRYANGGKLVSYLHGTRIGVMVEFDGDEAAAKDVAMHVA
EHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
AMKPVSLSAEQVPADLIAKERSIAEQKAAESGKPAEIAAKMVEGSVQKYLKEVSLFNQPF
HCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VKNDKQTVEQMLKAANTTVKGFTLYVVGEGIEKKQDDFAAEVAAQVAAAQKG
CCCCHHHHHHHHHHHCCEECEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA